Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:02:45 (10821): wrapper (7.7.26015): starting
01:02:45 (10821): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 01:02:45] Arguments: --nthreads 8
[2025-11-22 01:02:45] Threads: 8
[2025-11-22 01:02:45] Checking for CVMFS
[2025-11-22 01:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:02:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:02:48] 2.11.2.0 21664 165670 140596 153152 1 236 13013696 25165824 4632 130560 2 55256106 99.879 30750711 2569 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 01:02:48] CVMFS is ok
[2025-11-22 01:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:02:48] Checking for apptainer binary...
[2025-11-22 01:02:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 01:02:48] Running /usr/bin/apptainer --version
[2025-11-22 01:02:48] apptainer version 1.3.2-1.el7
[2025-11-22 01:02:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:03:09] cg-vwn258.simple-grid.lan
[2025-11-22 01:03:09] apptainer works
[2025-11-22 01:03:09] Set ATHENA_PROC_NUMBER=8
[2025-11-22 01:03:09] Set ATHENA_CORE_NUMBER=8
[2025-11-22 01:03:09] Starting ATLAS job with PandaID=6891592140
[2025-11-22 01:03:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:55:20]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:55:20] 2025-11-23 00:54:42,177 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:55:20] 2025-11-23 00:54:42,178 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 01:55:20] 2025-11-23 00:54:42,181 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6891592140/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,182 | INFO     | extracted standard info from prmon json
[2025-11-23 01:55:20] 2025-11-23 00:54:42,183 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:55:20] 2025-11-23 00:54:42,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:55:20] 2025-11-23 00:54:42,214 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:55:20] 2025-11-23 00:54:42,217 | INFO     | sum of square deviations: 957109135898.2836
[2025-11-23 01:55:20] 2025-11-23 00:54:42,273 | INFO     | sum of deviations: 2924470676973.861
[2025-11-23 01:55:20] 2025-11-23 00:54:42,274 | INFO     | mean x: 1763814855.7843406
[2025-11-23 01:55:20] 2025-11-23 00:54:42,274 | INFO     | mean y: 2856910.1778846155
[2025-11-23 01:55:20] 2025-11-23 00:54:42,274 | INFO     | intersect: -5386523079.922191
[2025-11-23 01:55:20] 2025-11-23 00:54:42,276 | INFO     | chi2: 11.49613435220477
[2025-11-23 01:55:20] 2025-11-23 00:54:42,278 | INFO     | sum of square deviations: 947283177810.0063
[2025-11-23 01:55:20] 2025-11-23 00:54:42,333 | INFO     | sum of deviations: 3427131106578.83
[2025-11-23 01:55:20] 2025-11-23 00:54:42,333 | INFO     | mean x: 1763814703.2887664
[2025-11-23 01:55:20] 2025-11-23 00:54:42,333 | INFO     | mean y: 2864711.4562370777
[2025-11-23 01:55:20] 2025-11-23 00:54:42,334 | INFO     | intersect: -6378357268.920187
[2025-11-23 01:55:20] 2025-11-23 00:54:42,335 | INFO     | chi2: 8.074641576785835
[2025-11-23 01:55:20] 2025-11-23 00:54:42,335 | INFO     | current chi2=8.074641576785835 (change=29.762115425893132 %)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,338 | INFO     | sum of square deviations: 937524709359.1724
[2025-11-23 01:55:20] 2025-11-23 00:54:42,404 | INFO     | sum of deviations: 3984494276352.935
[2025-11-23 01:55:20] 2025-11-23 00:54:42,405 | INFO     | mean x: 1763814550.7932227
[2025-11-23 01:55:20] 2025-11-23 00:54:42,405 | INFO     | mean y: 2873422.0331950206
[2025-11-23 01:55:20] 2025-11-23 00:54:42,405 | INFO     | intersect: -7493365249.89196
[2025-11-23 01:55:20] 2025-11-23 00:54:42,407 | INFO     | chi2: 4.077010548611847
[2025-11-23 01:55:20] 2025-11-23 00:54:42,407 | INFO     | current chi2=4.077010548611847 (change=49.508464123868535 %)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,409 | INFO     | sum of square deviations: 927833497983.2819
[2025-11-23 01:55:20] 2025-11-23 00:54:42,470 | INFO     | sum of deviations: 4192115191411.491
[2025-11-23 01:55:20] 2025-11-23 00:54:42,471 | INFO     | mean x: 1763814398.29771
[2025-11-23 01:55:20] 2025-11-23 00:54:42,471 | INFO     | mean y: 2876688.360166551
[2025-11-23 01:55:20] 2025-11-23 00:54:42,471 | INFO     | intersect: -7966347477.404302
[2025-11-23 01:55:20] 2025-11-23 00:54:42,473 | INFO     | chi2: 3.3817749267259614
[2025-11-23 01:55:20] 2025-11-23 00:54:42,473 | INFO     | current chi2=3.3817749267259614 (change=17.052583347438276 %)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,473 | INFO     | right removable region: 1440
[2025-11-23 01:55:20] 2025-11-23 00:54:42,475 | INFO     | sum of square deviations: 947282037110.007
[2025-11-23 01:55:20] 2025-11-23 00:54:42,536 | INFO     | sum of deviations: 2476081182358.099
[2025-11-23 01:55:20] 2025-11-23 00:54:42,537 | INFO     | mean x: 1763815008.2887664
[2025-11-23 01:55:20] 2025-11-23 00:54:42,537 | INFO     | mean y: 2863865.8159889732
[2025-11-23 01:55:20] 2025-11-23 00:54:42,537 | INFO     | intersect: -4607536184.108565
[2025-11-23 01:55:20] 2025-11-23 00:54:42,539 | INFO     | chi2: 9.004519123294479
[2025-11-23 01:55:20] 2025-11-23 00:54:42,539 | INFO     | current chi2=9.004519123294479 (change=21.673504784957913 %)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,539 | INFO     | left removable region: 10
[2025-11-23 01:55:20] 2025-11-23 00:54:42,541 | INFO     | sum of square deviations: 906746587829.1753
[2025-11-23 01:55:20] 2025-11-23 00:54:42,611 | INFO     | sum of deviations: 3653813146748.2627
[2025-11-23 01:55:20] 2025-11-23 00:54:42,612 | INFO     | mean x: 1763814672.804196
[2025-11-23 01:55:20] 2025-11-23 00:54:42,612 | INFO     | mean y: 2886304.0223776223
[2025-11-23 01:55:20] 2025-11-23 00:54:42,612 | INFO     | intersect: -7104556201.329054
[2025-11-23 01:55:20] 2025-11-23 00:54:42,614 | INFO     | chi2: 0.6516409012890618
[2025-11-23 01:55:20] 2025-11-23 00:54:42,614 | INFO     | current memory leak: 4.03 B/s (using 1430 data points, chi2=0.65)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,627 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | ..............................
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . Timing measurements:
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . get job = 0 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . initial setup = 9 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . payload setup = 165 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . stage-in = 0 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . payload execution = 88874 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . stage-out = 4 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,628 | INFO     | . log creation = 1 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,629 | INFO     | ..............................
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | 
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | job summary report
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | --------------------------------------------------
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | PanDA job id: 6891592140
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | task id: 47493068
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | errors: (none)
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:55:20] 2025-11-23 00:54:42,967 | INFO     | pilot state: finished 
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | transexitcode: 0
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | exeerrorcode: 0
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | exeerrordiag: 
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | exitcode: 0
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | exitmsg: OK
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | cpuconsumptiontime: 334114 s
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | nevents: 1000
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | neventsw: 0
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | pid: 21195
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | pgrp: 21195
[2025-11-23 01:55:20] 2025-11-23 00:54:42,968 | INFO     | corecount: 8
[2025-11-23 01:55:20] 2025-11-23 00:54:42,969 | INFO     | event service: False
[2025-11-23 01:55:20] 2025-11-23 00:54:42,969 | INFO     | sizes: {0: 2297967, 1: 2298652, 2: 2298851, 13: 2298851, 24: 2298907, 34: 2298935, 45: 2299091, 56: 2299119, 67: 2299147, 77: 2299175, 88: 2299231, 94: 2299801, 99
[2025-11-23 01:55:20] 2025-11-23 00:54:42,969 | INFO     | --------------------------------------------------
[2025-11-23 01:55:20] 2025-11-23 00:54:42,969 | INFO     | 
[2025-11-23 01:55:20] 2025-11-23 00:54:42,969 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-23 01:55:20] 2025-11-23 00:54:43,049 | INFO     | PID=14617 has CPU usage=17.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 01:55:20] 2025-11-23 00:54:43,049 | INFO     | .. there are 9 such processes running
[2025-11-23 01:55:20] 2025-11-23 00:54:43,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | job 6891592140 has completed (purged errors)
[2025-11-23 01:55:20] 2025-11-23 00:54:43,284 | INFO     | overall cleanup function is called
[2025-11-23 01:55:20] 2025-11-23 00:54:44,303 | INFO     | --- collectZombieJob: --- 10, [21195]
[2025-11-23 01:55:20] 2025-11-23 00:54:44,304 | INFO     | zombie collector waiting for pid 21195
[2025-11-23 01:55:20] 2025-11-23 00:54:44,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:55:20] 2025-11-23 00:54:44,304 | INFO     | collected zombie processes
[2025-11-23 01:55:20] 2025-11-23 00:54:44,304 | INFO     | will attempt to kill all subprocesses of pid=21195
[2025-11-23 01:55:20] 2025-11-23 00:54:44,414 | INFO     | process IDs to be killed: [21195] (in reverse order)
[2025-11-23 01:55:20] 2025-11-23 00:54:44,715 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:55:20] 2025-11-23 00:54:44,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:55:20] 2025-11-23 00:54:44,719 | INFO     | did not find any defunct processes belonging to 21195
[2025-11-23 01:55:20] 2025-11-23 00:54:44,722 | INFO     | did not find any defunct processes belonging to 21195
[2025-11-23 01:55:20] 2025-11-23 00:54:44,728 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:55:20] 2025-11-23 00:54:44,728 | INFO     | ready for new job
[2025-11-23 01:55:20] 2025-11-23 00:54:44,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:55:20] 2025-11-23 00:54:44,735 | INFO     | ***************************************
[2025-11-23 01:55:20] 2025-11-23 00:54:44,735 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:55:20] 2025-11-23 00:54:44,736 | INFO     | ***************************************
[2025-11-23 01:55:20] 2025-11-23 00:54:44,736 | INFO     | 
[2025-11-23 01:55:20] 2025-11-23 00:54:44,736 | INFO     | pilot is running in a VM
[2025-11-23 01:55:20] 2025-11-23 00:54:44,736 | INFO     | architecture information:
[2025-11-23 01:55:20] 2025-11-23 00:54:44,737 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:55:20] 2025-11-23 00:54:44,763 | INFO     | cat /etc/os-release:
[2025-11-23 01:55:20] NAME="CentOS Linux"
[2025-11-23 01:55:20] VERSION="7 (Core)"
[2025-11-23 01:55:20] ID="centos"
[2025-11-23 01:55:20] ID_LIKE="rhel fedora"
[2025-11-23 01:55:20] VERSION_ID="7"
[2025-11-23 01:55:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:55:20] ANSI_COLOR="0;31"
[2025-11-23 01:55:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:55:20] HOME_URL="https://www.centos.org/"
[2025-11-23 01:55:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:55:20] 
[2025-11-23 01:55:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:55:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:55:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:55:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:55:20] 
[2025-11-23 01:55:20] 2025-11-23 00:54:44,764 | INFO     | ***************************************
[2025-11-23 01:55:20] 2025-11-23 00:54:45,266 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-23 01:55:20] 2025-11-23 00:54:45,341 | INFO     | sufficient remaining disk space (495298019328 B)
[2025-11-23 01:55:20] 2025-11-23 00:54:45,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:55:20] 2025-11-23 00:54:45,341 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:55:20] 2025-11-23 00:54:45,342 | INFO     | update_server=False
[2025-11-23 01:55:20] 2025-11-23 00:54:45,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:55:20] 2025-11-23 00:54:45,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:55:20] 2025-11-23 00:54:45,402 | INFO     | all job control threads have been joined
[2025-11-23 01:55:20] 2025-11-23 00:54:45,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:55:20] 2025-11-23 00:54:45,640 | INFO     | aborting loop
[2025-11-23 01:55:20] 2025-11-23 00:54:45,714 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:55:20] 2025-11-23 00:54:46,134 | INFO     | all data control threads have been joined
[2025-11-23 01:55:20] 2025-11-23 00:54:46,347 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:46,369 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:46,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:46,403 | INFO     | all payload control threads have been joined
[2025-11-23 01:55:20] 2025-11-23 00:54:46,408 | INFO     | [job] control thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:46,646 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,140 | INFO     | [data] control thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,195 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,307 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,349 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,353 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,365 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:55:20] 2025-11-23 00:54:47,408 | INFO     | [payload] control thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,526 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,569 | INFO     | [job] validate thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:47,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:55:20] 2025-11-23 00:54:48,989 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:51,392 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:55:20] 2025-11-23 00:54:52,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472923055936)>', '<ExcThread(monitor, started 140472123119360)>']
[2025-11-23 01:55:20] 2025-11-23 00:54:57,805 | INFO     | all workflow threads have been joined
[2025-11-23 01:55:20] 2025-11-23 00:54:57,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:55:20] 2025-11-23 00:54:57,806 | INFO     | traces error code: 0
[2025-11-23 01:55:20] 2025-11-23 00:54:57,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:55:20] 2025-11-23 00:55:15,248 | INFO     | PID=14617 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 01:55:20] 2025-11-23 00:55:15,249 | INFO     | .. there are 9 such processes running
[2025-11-23 01:55:20] 2025-11-23 00:55:15,249 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:55:20] 2025-11-23 00:55:15,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:55:20] 2025-11-23 00:55:15,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:55:20] 2025-11-23 00:55:15,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:55:20] 2025-11-23 00:55:15,250 | INFO     | [monitor] control thread has ended
[2025-11-23 01:55:20] 2025-11-23 00:55:15,570 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:55:20] 2025-11-23 00:55:15,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:55:20] 2025-11-23 00:55:15,650 [wrapper] pilotpid: 14617
[2025-11-23 01:55:20] 2025-11-23 00:55:15,772 [wrapper] Pilot exit status: 0
[2025-11-23 01:55:20] 2025-11-23 00:55:16,250 [wrapper] pandaids: 6891592140
[2025-11-23 01:55:20] 2025-11-23 00:55:16,671 [wrapper] cleanup supervisor_pilot 11073 14618
[2025-11-23 01:55:20] 2025-11-23 00:55:16,749 [wrapper] Test setup, not cleaning
[2025-11-23 01:55:20] 2025-11-23 00:55:16,873 [wrapper] apfmon messages muted
[2025-11-23 01:55:20] 2025-11-23 00:55:16,979 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:55:20] 2025-11-23 00:55:17,091 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:55:20]  *** Error codes and diagnostics ***
[2025-11-23 01:55:20]     "exeErrorCode": 0,
[2025-11-23 01:55:20]     "exeErrorDiag": "",
[2025-11-23 01:55:20]     "pilotErrorCode": 0,
[2025-11-23 01:55:20]     "pilotErrorDiag": "",
[2025-11-23 01:55:20]  *** Listing of results directory ***
[2025-11-23 01:55:20] total 1322340
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc      5112 Nov 18 19:18 queuedata.json
[2025-11-23 01:55:20] -rwx------. 1 boinc boinc     36292 Nov 18 19:18 runpilot2-wrapper.sh
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc       100 Nov 22 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:55:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 01:02 run_atlas
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc       105 Nov 22 01:02 job.xml
[2025-11-23 01:55:20] -rw-r--r--. 2 boinc boinc 408346749 Nov 22 01:02 EVNT.47493065._000639.pool.root.1
[2025-11-23 01:55:20] drwxrwx--x. 2 boinc boinc        68 Nov 22 01:02 shared
[2025-11-23 01:55:20] -rw-r--r--. 2 boinc boinc    590099 Nov 22 01:02 input.tar.gz
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc      6389 Nov 22 01:02 init_data.xml
[2025-11-23 01:55:20] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:02 start_atlas.sh
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc         0 Nov 22 01:02 boinc_lockfile
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc      2772 Nov 22 01:03 pandaJob.out
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc    989798 Nov 22 01:07 agis_schedconf.cvmfs.json
[2025-11-23 01:55:20] drwx------. 5 boinc boinc      4096 Nov 22 01:07 pilot3
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc       533 Nov 23 01:32 boinc_task_state.xml
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc 913022810 Nov 23 01:53 HITS.47493068._005886.pool.root.1
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc        95 Nov 23 01:54 pilot_heartbeat.json
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc      1031 Nov 23 01:54 memory_monitor_summary.json
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc   1526164 Nov 23 01:54 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc   2538274 Nov 23 01:54 log.47493068._005886.job.log.tgz.1
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc      8622 Nov 23 01:54 heartbeat.json
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc      8192 Nov 23 01:55 boinc_mmap_file
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc        29 Nov 23 01:55 wrapper_checkpoint.txt
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc       820 Nov 23 01:55 pilotlog.txt
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc  11863073 Nov 23 01:55 log.47493068._005886.job.log.1
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc       353 Nov 23 01:55 output.list
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc       620 Nov 23 01:55 runtime_log
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc  14417920 Nov 23 01:55 result.tar.gz
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc      8703 Nov 23 01:55 runtime_log.err
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc       662 Nov 23 01:55 n1nMDm9Sff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPgFKDm4kXZwm.diag
[2025-11-23 01:55:20] -rw-r--r--. 1 boinc boinc     21065 Nov 23 01:55 stderr.txt
[2025-11-23 01:55:20] HITS file was successfully produced:
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc 913022810 Nov 23 01:53 shared/HITS.pool.root.1
[2025-11-23 01:55:20]  *** Contents of shared directory: ***
[2025-11-23 01:55:20] total 1305080
[2025-11-23 01:55:20] -rw-r--r--. 2 boinc boinc 408346749 Nov 22 01:02 ATLAS.root_0
[2025-11-23 01:55:20] -rw-r--r--. 2 boinc boinc    590099 Nov 22 01:02 input.tar.gz
[2025-11-23 01:55:20] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:02 start_atlas.sh
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc 913022810 Nov 23 01:53 HITS.pool.root.1
[2025-11-23 01:55:20] -rw-------. 1 boinc boinc  14417920 Nov 23 01:55 result.tar.gz
01:55:22 (10821): run_atlas exited; CPU time 334608.754969
01:55:22 (10821): called boinc_finish(0)

</stderr_txt>
]]>

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