Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:21 (3300980): wrapper (7.7.26015): starting
13:54:21 (3300980): wrapper: running run_atlas (--nthreads 3)
[2025-11-20 13:54:21] Arguments: --nthreads 3
[2025-11-20 13:54:21] Threads: 3
[2025-11-20 13:54:21] Checking for CVMFS
[2025-11-20 13:54:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 13:54:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 13:54:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 13:54:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 13:54:21] 2.9.2.0 2923852 2800 77104 153082 0 81 35345768 36864000 0 130560 0 1055425 99.793 281997 6329 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 13:54:21] CVMFS is ok
[2025-11-20 13:54:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 13:54:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 13:54:21] Further information can be found at the LHC@home message board.
[2025-11-20 13:54:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 13:54:21] Checking for apptainer binary...
[2025-11-20 13:54:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 13:54:21] Running /usr/bin/apptainer --version
[2025-11-20 13:54:21] apptainer version 1.4.1-1.1
[2025-11-20 13:54:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 13:54:21] magicA161a
[2025-11-20 13:54:21] apptainer works
[2025-11-20 13:54:21] Set ATHENA_PROC_NUMBER=3
[2025-11-20 13:54:21] Set ATHENA_CORE_NUMBER=3
[2025-11-20 13:54:21] Starting ATLAS job with PandaID=6891592063
[2025-11-20 13:54:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 21:39:05]  *** The last 200 lines of the pilot log: ***
[2025-11-20 21:39:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 21:39:05] ANSI_COLOR="0;31"
[2025-11-20 21:39:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 21:39:05] HOME_URL="https://www.centos.org/"
[2025-11-20 21:39:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 21:39:05] 
[2025-11-20 21:39:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 21:39:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 21:39:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 21:39:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 21:39:05] 
[2025-11-20 21:39:05] 2025-11-20 20:38:00,590 | INFO     | ***************************************
[2025-11-20 21:39:05] 2025-11-20 20:38:01,093 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-20 21:39:05] 2025-11-20 20:38:01,105 | INFO     | sufficient remaining disk space (366141767680 B)
[2025-11-20 21:39:05] 2025-11-20 20:38:01,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 21:39:05] 2025-11-20 20:38:01,105 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 21:39:05] 2025-11-20 20:38:01,105 | INFO     | update_server=False
[2025-11-20 21:39:05] 2025-11-20 20:38:01,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 21:39:05] 2025-11-20 20:38:01,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 21:39:05] 2025-11-20 20:38:01,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:39:05] 2025-11-20 20:38:01,106 | INFO     | aborting loop
[2025-11-20 21:39:05] 2025-11-20 20:38:01,163 | INFO     | all payload control threads have been joined
[2025-11-20 21:39:05] 2025-11-20 20:38:01,274 | INFO     | all data control threads have been joined
[2025-11-20 21:39:05] 2025-11-20 20:38:01,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 21:39:05] 2025-11-20 20:38:02,111 | INFO     | [job] retrieve thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:02,111 | INFO     | [job] job monitor thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:02,116 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:02,169 | INFO     | [payload] control thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:02,264 | INFO     | [payload] failed_post thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:02,280 | INFO     | [data] control thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:02,463 | INFO     | all job control threads have been joined
[2025-11-20 21:39:05] 2025-11-20 20:38:02,813 | INFO     | [payload] validate_post thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:03,084 | INFO     | [data] copytool_in thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:03,465 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:03,469 | INFO     | [job] control thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:03,482 | INFO     | [job] validate thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:03,517 | INFO     | [data] copytool_out thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:03,580 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:04,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:39:05] 2025-11-20 20:38:05,098 | INFO     | [job] queue monitor thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:05,112 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:11,806 | INFO     | job.realtimelogging is not enabled
[2025-11-20 21:39:05] 2025-11-20 20:38:12,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 21:39:05] 2025-11-20 20:38:31,195 | INFO     | PID=3304698 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 21:39:05] 2025-11-20 20:38:31,195 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 21:39:05] 2025-11-20 20:38:31,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 21:39:05] 2025-11-20 20:38:31,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 21:39:05] 2025-11-20 20:39:00,084 | INFO     | [monitor] cgroup control has ended
[2025-11-20 21:39:05] 2025-11-20 20:39:00,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434725144384)>', '<ExcThread(monitor, started 140434451961600)>']
[2025-11-20 21:39:05] 2025-11-20 20:39:01,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 21:39:05] 2025-11-20 20:39:01,355 | INFO     | [monitor] control thread has ended
[2025-11-20 21:39:05] 2025-11-20 20:39:05,805 | INFO     | all workflow threads have been joined
[2025-11-20 21:39:05] 2025-11-20 20:39:05,805 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 21:39:05] 2025-11-20 20:39:05,805 | INFO     | traces error code: 0
[2025-11-20 21:39:05] 2025-11-20 20:39:05,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 21:39:05] 2025-11-20 20:39:05,853 [wrapper] ==== pilot stdout END ====
[2025-11-20 21:39:05] 2025-11-20 20:39:05,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 21:39:05] 2025-11-20 20:39:05,858 [wrapper] pilotpid: 3304698
[2025-11-20 21:39:05] 2025-11-20 20:39:05,860 [wrapper] Pilot exit status: 0
[2025-11-20 21:39:05] 2025-11-20 20:39:05,867 [wrapper] pandaids: 6891592063
[2025-11-20 21:39:05] 2025-11-20 20:39:05,884 [wrapper] cleanup supervisor_pilot 3359305 3304699
[2025-11-20 21:39:05] 2025-11-20 20:39:05,886 [wrapper] Test setup, not cleaning
[2025-11-20 21:39:05] 2025-11-20 20:39:05,888 [wrapper] apfmon messages muted
[2025-11-20 21:39:05] 2025-11-20 20:39:05,891 [wrapper] ==== wrapper stdout END ====
[2025-11-20 21:39:05] 2025-11-20 20:39:05,893 [wrapper] ==== wrapper stderr END ====
[2025-11-20 21:39:05]  *** Error codes and diagnostics ***
[2025-11-20 21:39:05]     "exeErrorCode": 0,
[2025-11-20 21:39:05]     "exeErrorDiag": "",
[2025-11-20 21:39:05]     "pilotErrorCode": 0,
[2025-11-20 21:39:05]     "pilotErrorDiag": "",
[2025-11-20 21:39:05]  *** Listing of results directory ***
[2025-11-20 21:39:05] total 1302836
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc      5112 Nov 18 19:18 queuedata.json
[2025-11-20 21:39:05] -rwx------ 1 boinc boinc     36292 Nov 18 19:18 runpilot2-wrapper.sh
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc       100 Nov 20 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 21:39:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 13:54 run_atlas
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc       105 Nov 20 13:54 job.xml
[2025-11-20 21:39:05] -rw-r--r-- 2 boinc boinc 407604506 Nov 20 13:54 EVNT.47493065._000637.pool.root.1
[2025-11-20 21:39:05] -rw-r--r-- 2 boinc boinc    590103 Nov 20 13:54 input.tar.gz
[2025-11-20 21:39:05] -rw-r--r-- 2 boinc boinc     15120 Nov 20 13:54 start_atlas.sh
[2025-11-20 21:39:05] drwxrwx--x 2 boinc boinc      4096 Nov 20 13:54 shared
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc         0 Nov 20 13:54 boinc_setup_complete
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc      6447 Nov 20 13:54 init_data.xml
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc         0 Nov 20 13:54 boinc_lockfile
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc      2773 Nov 20 13:54 pandaJob.out
[2025-11-20 21:39:05] -rw------- 1 boinc boinc    989448 Nov 20 13:54 agis_schedconf.cvmfs.json
[2025-11-20 21:39:05] drwx------ 5 boinc boinc      4096 Nov 20 13:54 pilot3
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc       531 Nov 20 21:35 boinc_task_state.xml
[2025-11-20 21:39:05] -rw------- 1 boinc boinc 912429170 Nov 20 21:37 HITS.47493068._005870.pool.root.1
[2025-11-20 21:39:05] -rw------- 1 boinc boinc        95 Nov 20 21:37 pilot_heartbeat.json
[2025-11-20 21:39:05] -rw------- 1 boinc boinc      1021 Nov 20 21:37 memory_monitor_summary.json
[2025-11-20 21:39:05] -rw------- 1 boinc boinc   1526164 Nov 20 21:37 agis_ddmendpoints.agis.ALL.json
[2025-11-20 21:39:05] -rw------- 1 boinc boinc   1162774 Nov 20 21:37 log.47493068._005870.job.log.tgz.1
[2025-11-20 21:39:05] -rw------- 1 boinc boinc      8567 Nov 20 21:37 heartbeat.json
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc      8192 Nov 20 21:38 boinc_mmap_file
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc        28 Nov 20 21:38 wrapper_checkpoint.txt
[2025-11-20 21:39:05] -rw------- 1 boinc boinc      4824 Nov 20 21:39 pilotlog.txt
[2025-11-20 21:39:05] -rw------- 1 boinc boinc   3918191 Nov 20 21:39 log.47493068._005870.job.log.1
[2025-11-20 21:39:05] -rw------- 1 boinc boinc       353 Nov 20 21:39 output.list
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc       620 Nov 20 21:39 runtime_log
[2025-11-20 21:39:05] -rw------- 1 boinc boinc   5099520 Nov 20 21:39 result.tar.gz
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc      8798 Nov 20 21:39 runtime_log.err
[2025-11-20 21:39:05] -rw------- 1 boinc boinc       669 Nov 20 21:39 SQgMDm9Sff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKgFKDmAkeCmm.diag
[2025-11-20 21:39:05] -rw-r--r-- 1 boinc boinc      8607 Nov 20 21:39 stderr.txt
[2025-11-20 21:39:05] HITS file was successfully produced:
[2025-11-20 21:39:05] -rw------- 1 boinc boinc 912429170 Nov 20 21:37 shared/HITS.pool.root.1
[2025-11-20 21:39:05]  *** Contents of shared directory: ***
[2025-11-20 21:39:05] total 1294684
[2025-11-20 21:39:05] -rw-r--r-- 2 boinc boinc 407604506 Nov 20 13:54 ATLAS.root_0
[2025-11-20 21:39:05] -rw-r--r-- 2 boinc boinc    590103 Nov 20 13:54 input.tar.gz
[2025-11-20 21:39:05] -rw-r--r-- 2 boinc boinc     15120 Nov 20 13:54 start_atlas.sh
[2025-11-20 21:39:05] -rw------- 1 boinc boinc 912429170 Nov 20 21:37 HITS.pool.root.1
[2025-11-20 21:39:05] -rw------- 1 boinc boinc   5099520 Nov 20 21:39 result.tar.gz
21:39:07 (3300980): run_atlas exited; CPU time 82129.780038
21:39:07 (3300980): called boinc_finish(0)

</stderr_txt>
]]>

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