Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:35:03 (3131236): wrapper (7.7.26015): starting
11:35:03 (3131236): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 11:35:03] Arguments: --nthreads 4
[2025-11-20 11:35:03] Threads: 4
[2025-11-20 11:35:03] Checking for CVMFS
[2025-11-20 11:35:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 11:35:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 11:35:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 11:35:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 11:35:03] 2.13.3.0 761738 14072 51924 153078 3 81 3663905 4097024 0 130560 0 1228900 99.802 603961 6700 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-20 11:35:03] CVMFS is ok
[2025-11-20 11:35:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 11:35:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 11:35:03] Further information can be found at the LHC@home message board.
[2025-11-20 11:35:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 11:35:03] Checking for apptainer binary...
[2025-11-20 11:35:03] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-20 11:35:03] apptainer is not installed, using version from CVMFS
[2025-11-20 11:35:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 11:35:06] pckeatlas07
[2025-11-20 11:35:06] apptainer works
[2025-11-20 11:35:06] Set ATHENA_PROC_NUMBER=4
[2025-11-20 11:35:06] Set ATHENA_CORE_NUMBER=4
[2025-11-20 11:35:06] Starting ATLAS job with PandaID=6891592037
[2025-11-20 11:35:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 01:43:45]  *** The last 200 lines of the pilot log: ***
[2025-11-21 01:43:45] 2025-11-21 00:42:51,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-21 01:43:45] 2025-11-21 00:42:52,326 | INFO     | monitor loop #3833: job 0:6891592037 is in state 'finished'
[2025-11-21 01:43:45] 2025-11-21 00:42:52,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 01:43:45] 2025-11-21 00:42:52,513 | INFO     | time since job start (50857s) is within the limit (172800.0s)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,378 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 01:43:45] 2025-11-21 00:42:54,379 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3793.5822500000004
[2025-11-21 01:43:45] 2025-11-21 00:42:54,380 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6891592037/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,380 | INFO     | extracted standard info from prmon json
[2025-11-21 01:43:45] 2025-11-21 00:42:54,380 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 01:43:45] 2025-11-21 00:42:54,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 01:43:45] 2025-11-21 00:42:54,388 | INFO     | fitting pss+swap vs Time
[2025-11-21 01:43:45] 2025-11-21 00:42:54,389 | INFO     | sum of square deviations: 179877130772.5
[2025-11-21 01:43:45] 2025-11-21 00:42:54,397 | INFO     | sum of deviations: 423061240461.5
[2025-11-21 01:43:45] 2025-11-21 00:42:54,397 | INFO     | mean x: 1763660343.5
[2025-11-21 01:43:45] 2025-11-21 00:42:54,397 | INFO     | mean y: 2357520.3944844124
[2025-11-21 01:43:45] 2025-11-21 00:42:54,397 | INFO     | intersect: -4145675803.627916
[2025-11-21 01:43:45] 2025-11-21 00:42:54,398 | INFO     | chi2: 3.1658008471958627
[2025-11-21 01:43:45] 2025-11-21 00:42:54,398 | INFO     | sum of square deviations: 176661284430.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,406 | INFO     | sum of deviations: 576085459059.0005
[2025-11-21 01:43:45] 2025-11-21 00:42:54,406 | INFO     | mean x: 1763660191.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,406 | INFO     | mean y: 2364763.638118215
[2025-11-21 01:43:45] 2025-11-21 00:42:54,406 | INFO     | intersect: -5748861341.360034
[2025-11-21 01:43:45] 2025-11-21 00:42:54,407 | INFO     | chi2: 1.3035306767531014
[2025-11-21 01:43:45] 2025-11-21 00:42:54,407 | INFO     | current chi2=1.3035306767531014 (change=58.8246153289233 %)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,408 | INFO     | sum of square deviations: 173483996950.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,416 | INFO     | sum of deviations: 579584906296.5
[2025-11-21 01:43:45] 2025-11-21 00:42:54,416 | INFO     | mean x: 1763660038.5
[2025-11-21 01:43:45] 2025-11-21 00:42:54,416 | INFO     | mean y: 2364929.375
[2025-11-21 01:43:45] 2025-11-21 00:42:54,416 | INFO     | intersect: -5889767809.805034
[2025-11-21 01:43:45] 2025-11-21 00:42:54,417 | INFO     | chi2: 1.2752966429305201
[2025-11-21 01:43:45] 2025-11-21 00:42:54,417 | INFO     | current chi2=1.2752966429305201 (change=2.165966196737924 %)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,417 | INFO     | right removable region: 823
[2025-11-21 01:43:45] 2025-11-21 00:42:54,417 | INFO     | sum of square deviations: 176661284430.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,425 | INFO     | sum of deviations: 324791018608.00006
[2025-11-21 01:43:45] 2025-11-21 00:42:54,426 | INFO     | mean x: 1763660496.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,426 | INFO     | mean y: 2362165.4016887816
[2025-11-21 01:43:45] 2025-11-21 00:42:54,426 | INFO     | intersect: -3240120140.909768
[2025-11-21 01:43:45] 2025-11-21 00:42:54,426 | INFO     | chi2: 2.002134247695931
[2025-11-21 01:43:45] 2025-11-21 00:42:54,426 | INFO     | current chi2=2.002134247695931 (change=36.7574163905686 %)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,427 | INFO     | sum of square deviations: 173483996950.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,435 | INFO     | sum of deviations: 315469906196.5006
[2025-11-21 01:43:45] 2025-11-21 00:42:54,435 | INFO     | mean x: 1763660648.5
[2025-11-21 01:43:45] 2025-11-21 00:42:54,435 | INFO     | mean y: 2362612.4089805824
[2025-11-21 01:43:45] 2025-11-21 00:42:54,435 | INFO     | intersect: -3204745069.71982
[2025-11-21 01:43:45] 2025-11-21 00:42:54,435 | INFO     | chi2: 2.0016012161154557
[2025-11-21 01:43:45] 2025-11-21 00:42:54,435 | INFO     | current chi2=2.0016012161154557 (change=0.026623168805432442 %)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,435 | INFO     | left removable region: 20
[2025-11-21 01:43:45] 2025-11-21 00:42:54,436 | INFO     | sum of square deviations: 160555203842.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,444 | INFO     | sum of deviations: 460878873021.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,444 | INFO     | mean x: 1763660618.0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,444 | INFO     | mean y: 2370588.8567870487
[2025-11-21 01:43:45] 2025-11-21 00:42:54,444 | INFO     | intersect: -5060273900.793379
[2025-11-21 01:43:45] 2025-11-21 00:42:54,444 | INFO     | chi2: 0.10064471715824685
[2025-11-21 01:43:45] 2025-11-21 00:42:54,444 | INFO     | current memory leak: 2.87 B/s (using 803 data points, chi2=0.10)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | could have reported an average CPU frequency of 3710 MHz (31 samples)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | ..............................
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . Timing measurements:
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . get job = 0 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . initial setup = 1 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . payload setup = 6 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . stage-in = 0 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . payload execution = 50829 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . stage-out = 1 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | . log creation = 0 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,445 | INFO     | ..............................
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | 
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | job summary report
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | --------------------------------------------------
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | PanDA job id: 6891592037
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | task id: 47493068
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | errors: (none)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | pilot state: finished 
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | transexitcode: 0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | exeerrorcode: 0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | exeerrordiag: 
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | exitcode: 0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | exitmsg: OK
[2025-11-21 01:43:45] 2025-11-21 00:42:54,495 | INFO     | cpuconsumptiontime: 196377 s
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | nevents: 1000
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | neventsw: 0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | pid: 3142107
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | pgrp: 3142107
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | corecount: 4
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | event service: False
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | sizes: {0: 2297200, 2: 2297462, 10: 2297490, 50839: 2346772, 50842: 2357362, 50844: 2357418, 50847: 2357792}
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | --------------------------------------------------
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | 
[2025-11-21 01:43:45] 2025-11-21 00:42:54,496 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | job 6891592037 has completed (purged errors)
[2025-11-21 01:43:45] 2025-11-21 00:42:54,508 | INFO     | overall cleanup function is called
[2025-11-21 01:43:45] 2025-11-21 00:42:55,517 | INFO     | --- collectZombieJob: --- 10, [3142107]
[2025-11-21 01:43:45] 2025-11-21 00:42:55,518 | INFO     | zombie collector waiting for pid 3142107
[2025-11-21 01:43:45] 2025-11-21 00:42:55,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 01:43:45] 2025-11-21 00:42:55,518 | INFO     | collected zombie processes
[2025-11-21 01:43:45] 2025-11-21 00:42:55,518 | INFO     | will attempt to kill all subprocesses of pid=3142107
[2025-11-21 01:43:45] 2025-11-21 00:42:55,578 | INFO     | process IDs to be killed: [3142107] (in reverse order)
[2025-11-21 01:43:45] 2025-11-21 00:42:55,601 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 01:43:45] 2025-11-21 00:42:55,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 01:43:45] 2025-11-21 00:42:55,604 | INFO     | did not find any defunct processes belonging to 3142107
[2025-11-21 01:43:45] 2025-11-21 00:42:55,606 | INFO     | did not find any defunct processes belonging to 3142107
[2025-11-21 01:43:45] 2025-11-21 00:42:55,606 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 01:43:45] 2025-11-21 00:42:55,606 | INFO     | ready for new job
[2025-11-21 01:43:45] 2025-11-21 00:42:55,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 01:43:45] 2025-11-21 00:42:55,608 | INFO     | ***************************************
[2025-11-21 01:43:45] 2025-11-21 00:42:55,608 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 01:43:45] 2025-11-21 00:42:55,608 | INFO     | ***************************************
[2025-11-21 01:43:45] 2025-11-21 00:42:55,608 | INFO     | 
[2025-11-21 01:43:45] 2025-11-21 00:42:55,608 | INFO     | architecture information:
[2025-11-21 01:43:45] 2025-11-21 00:42:55,608 | INFO     | executing command: cat /etc/os-release
[2025-11-21 01:43:45] 2025-11-21 00:42:55,643 | INFO     | cat /etc/os-release:
[2025-11-21 01:43:45] NAME="CentOS Linux"
[2025-11-21 01:43:45] VERSION="7 (Core)"
[2025-11-21 01:43:45] ID="centos"
[2025-11-21 01:43:45] ID_LIKE="rhel fedora"
[2025-11-21 01:43:45] VERSION_ID="7"
[2025-11-21 01:43:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 01:43:45] ANSI_COLOR="0;31"
[2025-11-21 01:43:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 01:43:45] HOME_URL="https://www.centos.org/"
[2025-11-21 01:43:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 01:43:45] 
[2025-11-21 01:43:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 01:43:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 01:43:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 01:43:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 01:43:45] 
[2025-11-21 01:43:45] 2025-11-21 00:42:55,643 | INFO     | ***************************************
[2025-11-21 01:43:45] 2025-11-21 00:42:56,146 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-21 01:43:45] 2025-11-21 00:42:56,155 | INFO     | sufficient remaining disk space (329003302912 B)
[2025-11-21 01:43:45] 2025-11-21 00:42:56,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 01:43:45] 2025-11-21 00:42:56,155 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 01:43:45] 2025-11-21 00:42:56,155 | INFO     | update_server=False
[2025-11-21 01:43:45] 2025-11-21 00:42:56,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 01:43:45] 2025-11-21 00:42:56,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 01:43:45] 2025-11-21 00:42:56,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 01:43:45] 2025-11-21 00:42:56,156 | INFO     | aborting loop
[2025-11-21 01:43:45] 2025-11-21 00:42:56,370 | INFO     | all job control threads have been joined
[2025-11-21 01:43:45] 2025-11-21 00:42:57,028 | INFO     | all data control threads have been joined
[2025-11-21 01:43:45] 2025-11-21 00:42:57,160 | INFO     | [job] retrieve thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,161 | INFO     | [job] queue monitor thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,161 | INFO     | [job] job monitor thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,309 | INFO     | all payload control threads have been joined
[2025-11-21 01:43:45] 2025-11-21 00:42:57,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 01:43:45] 2025-11-21 00:42:57,357 | INFO     | [data] copytool_in thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,372 | INFO     | [job] control thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 01:43:45] 2025-11-21 00:42:57,658 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,796 | INFO     | [job] validate thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,802 | INFO     | [payload] failed_post thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,803 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:57,985 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:58,033 | INFO     | [data] control thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:58,314 | INFO     | [payload] control thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:58,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:58,724 | INFO     | [payload] validate_post thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:42:59,321 | INFO     | [data] copytool_out thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:43:01,550 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 01:43:45] 2025-11-21 00:43:25,666 | INFO     | PID=3134921 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 01:43:45] 2025-11-21 00:43:25,666 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 01:43:45] 2025-11-21 00:43:25,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 01:43:45] 2025-11-21 00:43:25,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 01:43:45] 2025-11-21 00:43:38,984 | INFO     | [monitor] cgroup control has ended
[2025-11-21 01:43:45] 2025-11-21 00:43:39,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060460787520)>', '<ExcThread(monitor, started 140059621717760)>']
[2025-11-21 01:43:45] 2025-11-21 00:43:39,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 01:43:45] 2025-11-21 00:43:39,733 | INFO     | [monitor] control thread has ended
[2025-11-21 01:43:45] 2025-11-21 00:43:44,628 | INFO     | all workflow threads have been joined
[2025-11-21 01:43:45] 2025-11-21 00:43:44,629 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 01:43:45] 2025-11-21 00:43:44,629 | INFO     | traces error code: 0
[2025-11-21 01:43:45] 2025-11-21 00:43:44,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 01:43:45] 2025-11-21 00:43:44,833 [wrapper] ==== pilot stdout END ====
[2025-11-21 01:43:45] 2025-11-21 00:43:44,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 01:43:45] 2025-11-21 00:43:44,835 [wrapper] pilotpid: 3134921
[2025-11-21 01:43:45] 2025-11-21 00:43:44,836 [wrapper] Pilot exit status: 0
[2025-11-21 01:43:45] 2025-11-21 00:43:44,877 [wrapper] pandaids: 6891592037
[2025-11-21 01:43:45] 2025-11-21 00:43:44,892 [wrapper] cleanup supervisor_pilot 3312642 3134922
[2025-11-21 01:43:45] 2025-11-21 00:43:44,893 [wrapper] Test setup, not cleaning
[2025-11-21 01:43:45] 2025-11-21 00:43:44,894 [wrapper] apfmon messages muted
[2025-11-21 01:43:45] 2025-11-21 00:43:44,895 [wrapper] ==== wrapper stdout END ====
[2025-11-21 01:43:45] 2025-11-21 00:43:44,896 [wrapper] ==== wrapper stderr END ====
[2025-11-21 01:43:45]  *** Error codes and diagnostics ***
[2025-11-21 01:43:45]     "exeErrorCode": 0,
[2025-11-21 01:43:45]     "exeErrorDiag": "",
[2025-11-21 01:43:45]     "pilotErrorCode": 0,
[2025-11-21 01:43:45]     "pilotErrorDiag": "",
[2025-11-21 01:43:45]  *** Listing of results directory ***
[2025-11-21 01:43:45] total 1328576
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-21 01:43:45] -rwx------ 1 boinc boinc     36292 Nov 18 19:18 runpilot2-wrapper.sh
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc      5112 Nov 18 19:18 queuedata.json
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc       100 Nov 20 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 01:43:45] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 11:34 run_atlas
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc       105 Nov 20 11:34 job.xml
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc      6312 Nov 20 11:35 init_data.xml
[2025-11-21 01:43:45] -rw-r--r-- 2 boinc boinc 408063486 Nov 20 11:35 EVNT.47493065._000635.pool.root.1
[2025-11-21 01:43:45] drwxrwx--x 2 boinc boinc        68 Nov 20 11:35 shared
[2025-11-21 01:43:45] -rw-r--r-- 2 boinc boinc    590092 Nov 20 11:35 input.tar.gz
[2025-11-21 01:43:45] -rw-r--r-- 2 boinc boinc     15120 Nov 20 11:35 start_atlas.sh
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc         0 Nov 20 11:35 boinc_lockfile
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc      2773 Nov 20 11:35 pandaJob.out
[2025-11-21 01:43:45] -rw------- 1 boinc boinc    989443 Nov 20 11:35 agis_schedconf.cvmfs.json
[2025-11-21 01:43:45] drwx------ 5 boinc boinc      4096 Nov 20 11:35 pilot3
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc       532 Nov 21 01:37 boinc_task_state.xml
[2025-11-21 01:43:45] -rw------- 1 boinc boinc 931163352 Nov 21 01:42 HITS.47493068._005844.pool.root.1
[2025-11-21 01:43:45] -rw------- 1 boinc boinc      1037 Nov 21 01:42 memory_monitor_summary.json
[2025-11-21 01:43:45] -rw------- 1 boinc boinc   1526164 Nov 21 01:42 agis_ddmendpoints.agis.ALL.json
[2025-11-21 01:43:45] -rw------- 1 boinc boinc   1565706 Nov 21 01:42 log.47493068._005844.job.log.tgz.1
[2025-11-21 01:43:45] -rw------- 1 boinc boinc      8612 Nov 21 01:42 heartbeat.json
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc      8192 Nov 21 01:43 boinc_mmap_file
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc        29 Nov 21 01:43 wrapper_checkpoint.txt
[2025-11-21 01:43:45] -rw------- 1 boinc boinc        95 Nov 21 01:43 pilot_heartbeat.json
[2025-11-21 01:43:45] -rw------- 1 boinc boinc      4749 Nov 21 01:43 pilotlog.txt
[2025-11-21 01:43:45] -rw------- 1 boinc boinc   7096192 Nov 21 01:43 log.47493068._005844.job.log.1
[2025-11-21 01:43:45] -rw------- 1 boinc boinc       353 Nov 21 01:43 output.list
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc       620 Nov 21 01:43 runtime_log
[2025-11-21 01:43:45] -rw------- 1 boinc boinc   8683520 Nov 21 01:43 result.tar.gz
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc      8703 Nov 21 01:43 runtime_log.err
[2025-11-21 01:43:45] -rw------- 1 boinc boinc       663 Nov 21 01:43 5W7NDmzSff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwDGKDmnu9MEn.diag
[2025-11-21 01:43:45] -rw-r--r-- 1 boinc boinc     21491 Nov 21 01:43 stderr.txt
[2025-11-21 01:43:45] HITS file was successfully produced:
[2025-11-21 01:43:45] -rw------- 1 boinc boinc 931163352 Nov 21 01:42 shared/HITS.pool.root.1
[2025-11-21 01:43:45]  *** Contents of shared directory: ***
[2025-11-21 01:43:45] total 1316916
[2025-11-21 01:43:45] -rw-r--r-- 2 boinc boinc 408063486 Nov 20 11:35 ATLAS.root_0
[2025-11-21 01:43:45] -rw-r--r-- 2 boinc boinc    590092 Nov 20 11:35 input.tar.gz
[2025-11-21 01:43:45] -rw-r--r-- 2 boinc boinc     15120 Nov 20 11:35 start_atlas.sh
[2025-11-21 01:43:45] -rw------- 1 boinc boinc 931163352 Nov 21 01:42 HITS.pool.root.1
[2025-11-21 01:43:45] -rw------- 1 boinc boinc   8683520 Nov 21 01:43 result.tar.gz
01:43:46 (3131236): run_atlas exited; CPU time 196664.322906
01:43:46 (3131236): called boinc_finish(0)

</stderr_txt>
]]>

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