Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:36 (11371): wrapper (7.7.26015): starting
22:04:36 (11371): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:04:36] Arguments: --nthreads 8
[2025-11-21 22:04:36] Threads: 8
[2025-11-21 22:04:36] Checking for CVMFS
[2025-11-21 22:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:04:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:04:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:04:38] 2.11.2.0 22738 278539 139512 153143 0 229 19176257 25165825 4364 130560 3 138708695 99.880 76302154 3038 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 22:04:38] CVMFS is ok
[2025-11-21 22:04:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:04:38] Checking for apptainer binary...
[2025-11-21 22:04:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:04:38] Running /usr/bin/apptainer --version
[2025-11-21 22:04:38] apptainer version 1.3.2-1.el7
[2025-11-21 22:04:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:04:41] cg-vwn395.simple-grid.lan
[2025-11-21 22:04:41] apptainer works
[2025-11-21 22:04:41] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:04:41] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:04:42] Starting ATLAS job with PandaID=6891565064
[2025-11-21 22:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:06:57]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:06:58] 2025-11-22 22:05:57,903 | INFO     | time since job start (89986s) is within the limit (172800.0s)
[2025-11-22 23:06:58] 2025-11-22 22:05:59,269 | INFO     | monitor loop #5987: job 0:6891565064 is in state 'finished'
[2025-11-22 23:06:58] 2025-11-22 22:05:59,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:06:58] 2025-11-22 22:05:59,910 | INFO     | time since job start (89988s) is within the limit (172800.0s)
[2025-11-22 23:06:58] 2025-11-22 22:06:01,774 | INFO     | monitor loop #5988: job 0:6891565064 is in state 'finished'
[2025-11-22 23:06:58] 2025-11-22 22:06:01,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:06:58] 2025-11-22 22:06:01,918 | INFO     | time since job start (89990s) is within the limit (172800.0s)
[2025-11-22 23:06:58] 2025-11-22 22:06:03,925 | INFO     | time since job start (89992s) is within the limit (172800.0s)
[2025-11-22 23:06:58] 2025-11-22 22:06:04,279 | INFO     | monitor loop #5989: job 0:6891565064 is in state 'finished'
[2025-11-22 23:06:58] 2025-11-22 22:06:04,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:06:58] 2025-11-22 22:06:05,932 | INFO     | time since job start (89994s) is within the limit (172800.0s)
[2025-11-22 23:06:58] 2025-11-22 22:06:06,790 | INFO     | monitor loop #5990: job 0:6891565064 is in state 'finished'
[2025-11-22 23:06:58] 2025-11-22 22:06:06,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:06:58] 2025-11-22 22:06:07,151 | INFO     | PID=15209 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:06:58] 2025-11-22 22:06:07,151 | INFO     | .. there are 9 such processes running
[2025-11-22 23:06:58] 2025-11-22 22:06:08,159 | INFO     | time since job start (89997s) is within the limit (172800.0s)
[2025-11-22 23:06:58] 2025-11-22 22:06:08,461 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 23:06:58] 2025-11-22 22:06:08,462 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 23:06:58] 2025-11-22 22:06:08,464 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6891565064/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:06:58] 2025-11-22 22:06:08,465 | INFO     | extracted standard info from prmon json
[2025-11-22 23:06:58] 2025-11-22 22:06:08,465 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:06:58] 2025-11-22 22:06:08,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:06:58] 2025-11-22 22:06:08,496 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:06:58] 2025-11-22 22:06:08,499 | INFO     | sum of square deviations: 991027299824.5426
[2025-11-22 23:06:58] 2025-11-22 22:06:08,572 | INFO     | sum of deviations: 2266759294397.01
[2025-11-22 23:06:58] 2025-11-22 22:06:08,573 | INFO     | mean x: 1763804143.2763069
[2025-11-22 23:06:58] 2025-11-22 22:06:08,573 | INFO     | mean y: 2854416.206381534
[2025-11-22 23:06:58] 2025-11-22 22:06:08,573 | INFO     | intersect: -4031463746.346128
[2025-11-22 23:06:58] 2025-11-22 22:06:08,575 | INFO     | chi2: 16.779084095004105
[2025-11-22 23:06:58] 2025-11-22 22:06:08,577 | INFO     | sum of square deviations: 980970140451.3699
[2025-11-22 23:06:58] 2025-11-22 22:06:08,663 | INFO     | sum of deviations: 2745417188690.011
[2025-11-22 23:06:58] 2025-11-22 22:06:08,663 | INFO     | mean x: 1763803990.780654
[2025-11-22 23:06:58] 2025-11-22 22:06:08,663 | INFO     | mean y: 2861672.8664850136
[2025-11-22 23:06:58] 2025-11-22 22:06:08,663 | INFO     | intersect: -4933453505.433582
[2025-11-22 23:06:58] 2025-11-22 22:06:08,665 | INFO     | chi2: 13.642507341281519
[2025-11-22 23:06:58] 2025-11-22 22:06:08,665 | INFO     | current chi2=13.642507341281519 (change=18.693372868048787 %)
[2025-11-22 23:06:58] 2025-11-22 22:06:08,665 | INFO     | right removable region: 1467
[2025-11-22 23:06:58] 2025-11-22 22:06:08,667 | INFO     | sum of square deviations: 980968993651.3694
[2025-11-22 23:06:58] 2025-11-22 22:06:08,753 | INFO     | sum of deviations: 1815445101704.2144
[2025-11-22 23:06:58] 2025-11-22 22:06:08,754 | INFO     | mean x: 1763804295.780654
[2025-11-22 23:06:58] 2025-11-22 22:06:08,754 | INFO     | mean y: 2861256.1341961855
[2025-11-22 23:06:58] 2025-11-22 22:06:08,754 | INFO     | intersect: -3261349835.004372
[2025-11-22 23:06:58] 2025-11-22 22:06:08,756 | INFO     | chi2: 14.318924795403877
[2025-11-22 23:06:58] 2025-11-22 22:06:08,756 | INFO     | current chi2=14.318924795403877 (change=14.662059535971508 %)
[2025-11-22 23:06:58] 2025-11-22 22:06:08,756 | INFO     | left removable region: 10
[2025-11-22 23:06:58] 2025-11-22 22:06:08,759 | INFO     | sum of square deviations: 959082739895.2239
[2025-11-22 23:06:58] 2025-11-22 22:06:08,876 | INFO     | sum of deviations: 2294048399223.4336
[2025-11-22 23:06:58] 2025-11-22 22:06:08,877 | INFO     | mean x: 1763804265.2855182
[2025-11-22 23:06:58] 2025-11-22 22:06:08,877 | INFO     | mean y: 2871796.006177076
[2025-11-22 23:06:58] 2025-11-22 22:06:08,877 | INFO     | intersect: -4216005453.065936
[2025-11-22 23:06:58] 2025-11-22 22:06:08,878 | INFO     | chi2: 10.361540512195097
[2025-11-22 23:06:58] 2025-11-22 22:06:08,879 | INFO     | current memory leak: 2.39 B/s (using 1457 data points, chi2=10.36)
[2025-11-22 23:06:58] 2025-11-22 22:06:08,881 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-22 23:06:58] 2025-11-22 22:06:08,881 | INFO     | ..............................
[2025-11-22 23:06:58] 2025-11-22 22:06:08,881 | INFO     | . Timing measurements:
[2025-11-22 23:06:58] 2025-11-22 22:06:08,881 | INFO     | . get job = 0 s
[2025-11-22 23:06:58] 2025-11-22 22:06:08,882 | INFO     | . initial setup = 2 s
[2025-11-22 23:06:58] 2025-11-22 22:06:08,882 | INFO     | . payload setup = 17 s
[2025-11-22 23:06:58] 2025-11-22 22:06:08,882 | INFO     | . stage-in = 0 s
[2025-11-22 23:06:58] 2025-11-22 22:06:08,882 | INFO     | . payload execution = 89832 s
[2025-11-22 23:06:58] 2025-11-22 22:06:08,882 | INFO     | . stage-out = 5 s
[2025-11-22 23:06:58] 2025-11-22 22:06:08,882 | INFO     | . log creation = 2 s
[2025-11-22 23:06:58] 2025-11-22 22:06:08,882 | INFO     | ..............................
[2025-11-22 23:06:58] 2025-11-22 22:06:09,021 | INFO     | 
[2025-11-22 23:06:58] 2025-11-22 22:06:09,021 | INFO     | job summary report
[2025-11-22 23:06:58] 2025-11-22 22:06:09,021 | INFO     | --------------------------------------------------
[2025-11-22 23:06:58] 2025-11-22 22:06:09,021 | INFO     | PanDA job id: 6891565064
[2025-11-22 23:06:58] 2025-11-22 22:06:09,021 | INFO     | task id: 47493068
[2025-11-22 23:06:58] 2025-11-22 22:06:09,021 | INFO     | errors: (none)
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | pilot state: finished 
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | transexitcode: 0
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | exeerrorcode: 0
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | exeerrordiag: 
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | exitcode: 0
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | exitmsg: OK
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | cpuconsumptiontime: 335955 s
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | nevents: 1000
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | neventsw: 0
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | pid: 21737
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | pgrp: 21737
[2025-11-22 23:06:58] 2025-11-22 22:06:09,022 | INFO     | corecount: 8
[2025-11-22 23:06:58] 2025-11-22 22:06:09,023 | INFO     | event service: False
[2025-11-22 23:06:58] 2025-11-22 22:06:09,023 | INFO     | sizes: {0: 2298619, 1: 2298818, 12: 2299108, 23: 2299108, 89853: 2362578, 89859: 2371572, 89863: 2371756, 89965: 2372002}
[2025-11-22 23:06:58] 2025-11-22 22:06:09,023 | INFO     | --------------------------------------------------
[2025-11-22 23:06:58] 2025-11-22 22:06:09,023 | INFO     | 
[2025-11-22 23:06:58] 2025-11-22 22:06:09,023 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-22 23:06:58] 2025-11-22 22:06:09,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,199 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:06:58] 2025-11-22 22:06:09,200 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,201 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:06:58] 2025-11-22 22:06:09,201 | INFO     | job 6891565064 has completed (purged errors)
[2025-11-22 23:06:58] 2025-11-22 22:06:09,201 | INFO     | overall cleanup function is called
[2025-11-22 23:06:58] 2025-11-22 22:06:10,219 | INFO     | --- collectZombieJob: --- 10, [21737]
[2025-11-22 23:06:58] 2025-11-22 22:06:10,219 | INFO     | zombie collector waiting for pid 21737
[2025-11-22 23:06:58] 2025-11-22 22:06:10,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:06:58] 2025-11-22 22:06:10,220 | INFO     | collected zombie processes
[2025-11-22 23:06:58] 2025-11-22 22:06:10,220 | INFO     | will attempt to kill all subprocesses of pid=21737
[2025-11-22 23:06:58] 2025-11-22 22:06:10,351 | INFO     | process IDs to be killed: [21737] (in reverse order)
[2025-11-22 23:06:58] 2025-11-22 22:06:11,248 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:06:58] 2025-11-22 22:06:11,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:06:58] 2025-11-22 22:06:11,252 | INFO     | did not find any defunct processes belonging to 21737
[2025-11-22 23:06:58] 2025-11-22 22:06:11,257 | INFO     | did not find any defunct processes belonging to 21737
[2025-11-22 23:06:58] 2025-11-22 22:06:11,294 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:06:58] 2025-11-22 22:06:11,295 | INFO     | ready for new job
[2025-11-22 23:06:58] 2025-11-22 22:06:11,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:06:58] 2025-11-22 22:06:11,302 | INFO     | ***************************************
[2025-11-22 23:06:58] 2025-11-22 22:06:11,302 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:06:58] 2025-11-22 22:06:11,302 | INFO     | ***************************************
[2025-11-22 23:06:58] 2025-11-22 22:06:11,302 | INFO     | 
[2025-11-22 23:06:58] 2025-11-22 22:06:11,303 | INFO     | pilot is running in a VM
[2025-11-22 23:06:58] 2025-11-22 22:06:11,303 | INFO     | architecture information:
[2025-11-22 23:06:58] 2025-11-22 22:06:11,307 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:06:58] 2025-11-22 22:06:11,447 | INFO     | cat /etc/os-release:
[2025-11-22 23:06:58] NAME="CentOS Linux"
[2025-11-22 23:06:58] VERSION="7 (Core)"
[2025-11-22 23:06:58] ID="centos"
[2025-11-22 23:06:58] ID_LIKE="rhel fedora"
[2025-11-22 23:06:58] VERSION_ID="7"
[2025-11-22 23:06:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:06:58] ANSI_COLOR="0;31"
[2025-11-22 23:06:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:06:58] HOME_URL="https://www.centos.org/"
[2025-11-22 23:06:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:06:58] 
[2025-11-22 23:06:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:06:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:06:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:06:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:06:58] 
[2025-11-22 23:06:58] 2025-11-22 22:06:11,447 | INFO     | ***************************************
[2025-11-22 23:06:58] 2025-11-22 22:06:11,950 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-22 23:06:58] 2025-11-22 22:06:12,174 | INFO     | sufficient remaining disk space (495018049536 B)
[2025-11-22 23:06:58] 2025-11-22 22:06:12,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:06:58] 2025-11-22 22:06:12,175 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:06:58] 2025-11-22 22:06:12,175 | INFO     | update_server=False
[2025-11-22 23:06:58] 2025-11-22 22:06:12,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:06:58] 2025-11-22 22:06:12,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:06:58] 2025-11-22 22:06:12,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:06:58] 2025-11-22 22:06:12,496 | INFO     | all payload control threads have been joined
[2025-11-22 23:06:58] 2025-11-22 22:06:12,597 | INFO     | all job control threads have been joined
[2025-11-22 23:06:58] 2025-11-22 22:06:12,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:06:58] 2025-11-22 22:06:12,835 | INFO     | aborting loop
[2025-11-22 23:06:58] 2025-11-22 22:06:12,947 | INFO     | all data control threads have been joined
[2025-11-22 23:06:58] 2025-11-22 22:06:13,180 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,372 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,388 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,459 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,502 | INFO     | [payload] control thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,510 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,603 | INFO     | [job] control thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,606 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,641 | INFO     | [job] validate thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,840 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:13,953 | INFO     | [data] control thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:14,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:06:58] 2025-11-22 22:06:14,185 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:14,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:14,536 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:15,041 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:16,184 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:06:58] 2025-11-22 22:06:41,378 | INFO     | PID=15209 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:06:58] 2025-11-22 22:06:41,378 | INFO     | .. there are 9 such processes running
[2025-11-22 23:06:58] 2025-11-22 22:06:41,379 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:06:58] 2025-11-22 22:06:41,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:06:58] 2025-11-22 22:06:41,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:06:58] 2025-11-22 22:06:48,526 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:06:58] 2025-11-22 22:06:48,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501159126848)>', '<ExcThread(monitor, started 140500940584704)>']
[2025-11-22 23:06:58] 2025-11-22 22:06:49,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:06:58] 2025-11-22 22:06:49,428 | INFO     | [monitor] control thread has ended
[2025-11-22 23:06:58] 2025-11-22 22:06:53,583 | INFO     | all workflow threads have been joined
[2025-11-22 23:06:58] 2025-11-22 22:06:53,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:06:58] 2025-11-22 22:06:53,584 | INFO     | traces error code: 0
[2025-11-22 23:06:58] 2025-11-22 22:06:53,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:06:58] 2025-11-22 22:06:53,946 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:06:58] 2025-11-22 22:06:53,974 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:06:58] 2025-11-22 22:06:54,032 [wrapper] pilotpid: 15209
[2025-11-22 23:06:58] 2025-11-22 22:06:54,109 [wrapper] Pilot exit status: 0
[2025-11-22 23:06:58] 2025-11-22 22:06:54,470 [wrapper] pandaids: 6891565064
[2025-11-22 23:06:58] 2025-11-22 22:06:54,780 [wrapper] cleanup supervisor_pilot 22196 15210
[2025-11-22 23:06:58] 2025-11-22 22:06:54,843 [wrapper] Test setup, not cleaning
[2025-11-22 23:06:58] 2025-11-22 22:06:54,960 [wrapper] apfmon messages muted
[2025-11-22 23:06:58] 2025-11-22 22:06:55,033 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:06:58] 2025-11-22 22:06:55,118 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:06:58]  *** Error codes and diagnostics ***
[2025-11-22 23:06:58]     "exeErrorCode": 0,
[2025-11-22 23:06:58]     "exeErrorDiag": "",
[2025-11-22 23:06:58]     "pilotErrorCode": 0,
[2025-11-22 23:06:58]     "pilotErrorDiag": "",
[2025-11-22 23:06:58]  *** Listing of results directory ***
[2025-11-22 23:06:58] total 1326464
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:27 queuedata.json
[2025-11-22 23:06:58] -rwx------. 1 boinc boinc     36292 Nov 18 16:27 runpilot2-wrapper.sh
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc       100 Nov 21 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:06:58] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 22:04 run_atlas
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc       105 Nov 21 22:04 job.xml
[2025-11-22 23:06:58] -rw-r--r--. 2 boinc boinc 409818175 Nov 21 22:04 EVNT.47493065._000129.pool.root.1
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc      6390 Nov 21 22:04 init_data.xml
[2025-11-22 23:06:58] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:04 start_atlas.sh
[2025-11-22 23:06:58] drwxrwx--x. 2 boinc boinc        68 Nov 21 22:04 shared
[2025-11-22 23:06:58] -rw-r--r--. 2 boinc boinc    590103 Nov 21 22:04 input.tar.gz
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc         0 Nov 21 22:04 boinc_lockfile
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc      2770 Nov 21 22:04 pandaJob.out
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc    989798 Nov 21 22:06 agis_schedconf.cvmfs.json
[2025-11-22 23:06:58] drwx------. 5 boinc boinc      4096 Nov 21 22:06 pilot3
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc       533 Nov 22 22:40 boinc_task_state.xml
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc 915607283 Nov 22 23:03 HITS.47493068._001281.pool.root.1
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc      1031 Nov 22 23:04 memory_monitor_summary.json
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc   1526164 Nov 22 23:04 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc   2540766 Nov 22 23:04 log.47493068._001281.job.log.tgz.1
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc      8623 Nov 22 23:06 heartbeat.json
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc        95 Nov 22 23:06 pilot_heartbeat.json
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc      4884 Nov 22 23:06 pilotlog.txt
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc        29 Nov 22 23:06 wrapper_checkpoint.txt
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc      8192 Nov 22 23:06 boinc_mmap_file
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc  11943617 Nov 22 23:06 log.47493068._001281.job.log.1
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc       353 Nov 22 23:06 output.list
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc       620 Nov 22 23:06 runtime_log
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc  14499840 Nov 22 23:06 result.tar.gz
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc       662 Nov 22 23:06 yiKNDmhncf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMEFKDm75FZAn.diag
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc      8703 Nov 22 23:06 runtime_log.err
[2025-11-22 23:06:58] -rw-r--r--. 1 boinc boinc     21462 Nov 22 23:06 stderr.txt
[2025-11-22 23:06:58] HITS file was successfully produced:
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc 915607283 Nov 22 23:03 shared/HITS.pool.root.1
[2025-11-22 23:06:58]  *** Contents of shared directory: ***
[2025-11-22 23:06:58] total 1309120
[2025-11-22 23:06:58] -rw-r--r--. 2 boinc boinc 409818175 Nov 21 22:04 ATLAS.root_0
[2025-11-22 23:06:58] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:04 start_atlas.sh
[2025-11-22 23:06:58] -rw-r--r--. 2 boinc boinc    590103 Nov 21 22:04 input.tar.gz
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc 915607283 Nov 22 23:03 HITS.pool.root.1
[2025-11-22 23:06:58] -rw-------. 1 boinc boinc  14499840 Nov 22 23:06 result.tar.gz
23:06:59 (11371): run_atlas exited; CPU time 336442.206105
23:06:59 (11371): called boinc_finish(0)

</stderr_txt>
]]>

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