Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:14:56 (30381): wrapper (7.7.26015): starting
23:14:56 (30381): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:14:56] Arguments: --nthreads 8
[2025-11-21 23:14:56] Threads: 8
[2025-11-21 23:14:56] Checking for CVMFS
[2025-11-21 23:14:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:14:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:14:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:14:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:14:57] 2.11.2.0 27053 165562 135120 153145 2 228 23680598 25165825 2967 130560 4 56680126 99.903 28028199 2704 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 23:14:57] CVMFS is ok
[2025-11-21 23:14:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:14:57] Checking for apptainer binary...
[2025-11-21 23:14:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:14:57] Running /usr/bin/apptainer --version
[2025-11-21 23:14:57] apptainer version 1.3.2-1.el7
[2025-11-21 23:14:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:14:59] cg-vwn373.simple-grid.lan
[2025-11-21 23:14:59] apptainer works
[2025-11-21 23:14:59] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:14:59] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:14:59] Starting ATLAS job with PandaID=6891568321
[2025-11-21 23:14:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:35:12]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:35:12] 2025-11-22 23:34:18,067 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:35:12] 2025-11-22 23:34:18,070 | INFO     | sum of square deviations: 1029875410898.8096
[2025-11-23 00:35:12] 2025-11-22 23:34:18,156 | INFO     | time since job start (91136s) is within the limit (172800.0s)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,178 | INFO     | sum of deviations: 3555019667269.2026
[2025-11-23 00:35:12] 2025-11-22 23:34:18,178 | INFO     | mean x: 1763808848.9410188
[2025-11-23 00:35:12] 2025-11-22 23:34:18,178 | INFO     | mean y: 2870126.3773458446
[2025-11-23 00:35:12] 2025-11-22 23:34:18,178 | INFO     | intersect: -6085609199.307683
[2025-11-23 00:35:12] 2025-11-22 23:34:18,180 | INFO     | chi2: 9.36949509888581
[2025-11-23 00:35:12] 2025-11-22 23:34:18,182 | INFO     | sum of square deviations: 1019556747573.3918
[2025-11-23 00:35:12] 2025-11-22 23:34:18,266 | INFO     | sum of deviations: 4048577386534.9814
[2025-11-23 00:35:12] 2025-11-22 23:34:18,266 | INFO     | mean x: 1763808696.4458642
[2025-11-23 00:35:12] 2025-11-22 23:34:18,267 | INFO     | mean y: 2877419.6395427035
[2025-11-23 00:35:12] 2025-11-22 23:34:18,267 | INFO     | intersect: -7001064263.449987
[2025-11-23 00:35:12] 2025-11-22 23:34:18,268 | INFO     | chi2: 6.2834908198250865
[2025-11-23 00:35:12] 2025-11-22 23:34:18,269 | INFO     | current chi2=6.2834908198250865 (change=32.936719070675444 %)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,271 | INFO     | sum of square deviations: 1009307248335.4049
[2025-11-23 00:35:12] 2025-11-22 23:34:18,333 | INFO     | sum of deviations: 4538633364957.867
[2025-11-23 00:35:12] 2025-11-22 23:34:18,333 | INFO     | mean x: 1763808543.9507422
[2025-11-23 00:35:12] 2025-11-22 23:34:18,334 | INFO     | mean y: 2884709.258434548
[2025-11-23 00:35:12] 2025-11-22 23:34:18,334 | INFO     | intersect: -7928575527.627076
[2025-11-23 00:35:12] 2025-11-22 23:34:18,336 | INFO     | chi2: 3.151827039186479
[2025-11-23 00:35:12] 2025-11-22 23:34:18,336 | INFO     | current chi2=3.151827039186479 (change=49.83955368818035 %)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,338 | INFO     | sum of square deviations: 999126319629.98
[2025-11-23 00:35:12] 2025-11-22 23:34:18,413 | INFO     | sum of deviations: 4613738864159.225
[2025-11-23 00:35:12] 2025-11-22 23:34:18,414 | INFO     | mean x: 1763808391.4529452
[2025-11-23 00:35:12] 2025-11-22 23:34:18,414 | INFO     | mean y: 2885832.096817874
[2025-11-23 00:35:12] 2025-11-22 23:34:18,414 | INFO     | intersect: -8141981503.1870575
[2025-11-23 00:35:12] 2025-11-22 23:34:18,416 | INFO     | chi2: 2.934957418208823
[2025-11-23 00:35:12] 2025-11-22 23:34:18,416 | INFO     | current chi2=2.934957418208823 (change=6.880758946519869 %)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,417 | INFO     | right removable region: 1476
[2025-11-23 00:35:12] 2025-11-22 23:34:18,419 | INFO     | sum of square deviations: 1019555436073.3917
[2025-11-23 00:35:12] 2025-11-22 23:34:18,492 | INFO     | sum of deviations: 3093510744038.3696
[2025-11-23 00:35:12] 2025-11-22 23:34:18,492 | INFO     | mean x: 1763809001.4458642
[2025-11-23 00:35:12] 2025-11-22 23:34:18,492 | INFO     | mean y: 2876943.296570276
[2025-11-23 00:35:12] 2025-11-22 23:34:18,492 | INFO     | intersect: -5348830186.448554
[2025-11-23 00:35:12] 2025-11-22 23:34:18,494 | INFO     | chi2: 6.8501576179446815
[2025-11-23 00:35:12] 2025-11-22 23:34:18,495 | INFO     | current chi2=6.8501576179446815 (change=26.8887219039233 %)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,497 | INFO     | sum of square deviations: 1009305351000.5734
[2025-11-23 00:35:12] 2025-11-22 23:34:18,568 | INFO     | sum of deviations: 2988282369239.8887
[2025-11-23 00:35:12] 2025-11-22 23:34:18,568 | INFO     | mean x: 1763809153.9453442
[2025-11-23 00:35:12] 2025-11-22 23:34:18,569 | INFO     | mean y: 2878508.665317139
[2025-11-23 00:35:12] 2025-11-22 23:34:18,569 | INFO     | intersect: -5219287203.8355
[2025-11-23 00:35:12] 2025-11-22 23:34:18,570 | INFO     | chi2: 6.7879462116986895
[2025-11-23 00:35:12] 2025-11-22 23:34:18,571 | INFO     | current chi2=6.7879462116986895 (change=0.9081748145914612 %)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,571 | INFO     | left removable region: 20
[2025-11-23 00:35:12] 2025-11-22 23:34:18,573 | INFO     | sum of square deviations: 957112154083.186
[2025-11-23 00:35:12] 2025-11-22 23:34:18,652 | INFO     | sum of deviations: 3895425137839.3276
[2025-11-23 00:35:12] 2025-11-22 23:34:18,652 | INFO     | mean x: 1763808970.956044
[2025-11-23 00:35:12] 2025-11-22 23:34:18,652 | INFO     | mean y: 2896547.911401099
[2025-11-23 00:35:12] 2025-11-22 23:34:18,652 | INFO     | intersect: -7175766657.332492
[2025-11-23 00:35:12] 2025-11-22 23:34:18,654 | INFO     | chi2: 0.296220867314298
[2025-11-23 00:35:12] 2025-11-22 23:34:18,655 | INFO     | current memory leak: 4.07 B/s (using 1456 data points, chi2=0.30)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,657 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,657 | INFO     | ..............................
[2025-11-23 00:35:12] 2025-11-22 23:34:18,657 | INFO     | . Timing measurements:
[2025-11-23 00:35:12] 2025-11-22 23:34:18,657 | INFO     | . get job = 0 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,657 | INFO     | . initial setup = 2 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,658 | INFO     | . payload setup = 13 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,658 | INFO     | . stage-in = 0 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,658 | INFO     | . payload execution = 90999 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,658 | INFO     | . stage-out = 5 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,658 | INFO     | . log creation = 1 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,658 | INFO     | ..............................
[2025-11-23 00:35:12] 2025-11-22 23:34:18,795 | INFO     | 
[2025-11-23 00:35:12] 2025-11-22 23:34:18,795 | INFO     | job summary report
[2025-11-23 00:35:12] 2025-11-22 23:34:18,795 | INFO     | --------------------------------------------------
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | PanDA job id: 6891568321
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | task id: 47493068
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | errors: (none)
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | pilot state: finished 
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | transexitcode: 0
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | exeerrorcode: 0
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | exeerrordiag: 
[2025-11-23 00:35:12] 2025-11-22 23:34:18,796 | INFO     | exitcode: 0
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | exitmsg: OK
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | cpuconsumptiontime: 333670 s
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | nevents: 1000
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | neventsw: 0
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | pid: 8376
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | pgrp: 8376
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | corecount: 8
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | event service: False
[2025-11-23 00:35:12] 2025-11-22 23:34:18,797 | INFO     | sizes: {0: 2298626, 1: 2298825, 11: 2299087, 12: 2299115, 91018: 2361804, 91023: 2370984, 91116: 2371174}
[2025-11-23 00:35:12] 2025-11-22 23:34:18,798 | INFO     | --------------------------------------------------
[2025-11-23 00:35:12] 2025-11-22 23:34:18,798 | INFO     | 
[2025-11-23 00:35:12] 2025-11-22 23:34:18,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-11-23 00:35:12] 2025-11-22 23:34:19,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:35:12] 2025-11-22 23:34:19,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,076 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:35:12] 2025-11-22 23:34:19,076 | INFO     | job 6891568321 has completed (purged errors)
[2025-11-23 00:35:12] 2025-11-22 23:34:19,076 | INFO     | overall cleanup function is called
[2025-11-23 00:35:12] 2025-11-22 23:34:20,096 | INFO     | --- collectZombieJob: --- 10, [8376]
[2025-11-23 00:35:12] 2025-11-22 23:34:20,096 | INFO     | zombie collector waiting for pid 8376
[2025-11-23 00:35:12] 2025-11-22 23:34:20,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:35:12] 2025-11-22 23:34:20,096 | INFO     | collected zombie processes
[2025-11-23 00:35:12] 2025-11-22 23:34:20,096 | INFO     | will attempt to kill all subprocesses of pid=8376
[2025-11-23 00:35:12] 2025-11-22 23:34:20,229 | INFO     | process IDs to be killed: [8376] (in reverse order)
[2025-11-23 00:35:12] 2025-11-22 23:34:21,187 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:35:12] 2025-11-22 23:34:21,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:35:12] 2025-11-22 23:34:21,190 | INFO     | did not find any defunct processes belonging to 8376
[2025-11-23 00:35:12] 2025-11-22 23:34:21,194 | INFO     | did not find any defunct processes belonging to 8376
[2025-11-23 00:35:12] 2025-11-22 23:34:21,196 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:35:12] 2025-11-22 23:34:21,196 | INFO     | ready for new job
[2025-11-23 00:35:12] 2025-11-22 23:34:21,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:35:12] 2025-11-22 23:34:21,203 | INFO     | ***************************************
[2025-11-23 00:35:12] 2025-11-22 23:34:21,204 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:35:12] 2025-11-22 23:34:21,204 | INFO     | ***************************************
[2025-11-23 00:35:12] 2025-11-22 23:34:21,204 | INFO     | 
[2025-11-23 00:35:12] 2025-11-22 23:34:21,204 | INFO     | pilot is running in a VM
[2025-11-23 00:35:12] 2025-11-22 23:34:21,205 | INFO     | architecture information:
[2025-11-23 00:35:12] 2025-11-22 23:34:21,205 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:35:12] 2025-11-22 23:34:21,339 | INFO     | cat /etc/os-release:
[2025-11-23 00:35:12] NAME="CentOS Linux"
[2025-11-23 00:35:12] VERSION="7 (Core)"
[2025-11-23 00:35:12] ID="centos"
[2025-11-23 00:35:12] ID_LIKE="rhel fedora"
[2025-11-23 00:35:12] VERSION_ID="7"
[2025-11-23 00:35:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:35:12] ANSI_COLOR="0;31"
[2025-11-23 00:35:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:35:12] HOME_URL="https://www.centos.org/"
[2025-11-23 00:35:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:35:12] 
[2025-11-23 00:35:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:35:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:35:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:35:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:35:12] 
[2025-11-23 00:35:12] 2025-11-22 23:34:21,339 | INFO     | ***************************************
[2025-11-23 00:35:12] 2025-11-22 23:34:21,843 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-11-23 00:35:12] 2025-11-22 23:34:22,122 | INFO     | sufficient remaining disk space (493213450240 B)
[2025-11-23 00:35:12] 2025-11-22 23:34:22,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:35:12] 2025-11-22 23:34:22,123 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:35:12] 2025-11-22 23:34:22,123 | INFO     | update_server=False
[2025-11-23 00:35:12] 2025-11-22 23:34:22,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:35:12] 2025-11-22 23:34:22,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:35:12] 2025-11-22 23:34:22,125 | INFO     | aborting loop
[2025-11-23 00:35:12] 2025-11-22 23:34:22,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:35:12] 2025-11-22 23:34:22,290 | INFO     | all data control threads have been joined
[2025-11-23 00:35:12] 2025-11-22 23:34:22,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:35:12] 2025-11-22 23:34:22,713 | INFO     | all job control threads have been joined
[2025-11-23 00:35:12] 2025-11-22 23:34:23,130 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:23,131 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:23,277 | INFO     | all payload control threads have been joined
[2025-11-23 00:35:12] 2025-11-22 23:34:23,296 | INFO     | [data] control thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:23,382 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:23,518 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:23,647 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:23,720 | INFO     | [job] control thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:23,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:35:12] 2025-11-22 23:34:23,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:24,141 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:24,284 | INFO     | [payload] control thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:24,496 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:24,549 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:24,602 | INFO     | [job] validate thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:24,623 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:24,815 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:26,329 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:35:12] 2025-11-22 23:34:51,329 | INFO     | PID=1767 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 00:35:12] 2025-11-22 23:34:51,329 | INFO     | .. there are 9 such processes running
[2025-11-23 00:35:12] 2025-11-22 23:34:51,330 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:35:12] 2025-11-22 23:34:51,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:35:12] 2025-11-22 23:34:51,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:35:12] 2025-11-22 23:35:01,751 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:35:12] 2025-11-22 23:35:03,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677958768448)>', '<ExcThread(monitor, started 140677643998976)>']
[2025-11-23 00:35:12] 2025-11-22 23:35:03,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:35:12] 2025-11-22 23:35:03,403 | INFO     | [monitor] control thread has ended
[2025-11-23 00:35:12] 2025-11-22 23:35:08,048 | INFO     | all workflow threads have been joined
[2025-11-23 00:35:12] 2025-11-22 23:35:08,049 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:35:12] 2025-11-22 23:35:08,049 | INFO     | traces error code: 0
[2025-11-23 00:35:12] 2025-11-22 23:35:08,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:35:12] 2025-11-22 23:35:08,516 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:35:12] 2025-11-22 23:35:08,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:35:12] 2025-11-22 23:35:08,643 [wrapper] pilotpid: 1767
[2025-11-23 00:35:12] 2025-11-22 23:35:08,681 [wrapper] Pilot exit status: 0
[2025-11-23 00:35:12] 2025-11-22 23:35:08,966 [wrapper] pandaids: 6891568321
[2025-11-23 00:35:12] 2025-11-22 23:35:10,003 [wrapper] cleanup supervisor_pilot 28272 1768
[2025-11-23 00:35:12] 2025-11-22 23:35:10,052 [wrapper] Test setup, not cleaning
[2025-11-23 00:35:12] 2025-11-22 23:35:10,150 [wrapper] apfmon messages muted
[2025-11-23 00:35:12] 2025-11-22 23:35:10,255 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:35:12] 2025-11-22 23:35:10,332 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:35:12]  *** Error codes and diagnostics ***
[2025-11-23 00:35:12]     "exeErrorCode": 0,
[2025-11-23 00:35:12]     "exeErrorDiag": "",
[2025-11-23 00:35:12]     "pilotErrorCode": 0,
[2025-11-23 00:35:12]     "pilotErrorDiag": "",
[2025-11-23 00:35:12]  *** Listing of results directory ***
[2025-11-23 00:35:12] total 1331252
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:32 queuedata.json
[2025-11-23 00:35:12] -rwx------. 1 boinc boinc     36292 Nov 18 16:33 runpilot2-wrapper.sh
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc       100 Nov 21 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:35:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 23:14 run_atlas
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc       105 Nov 21 23:14 job.xml
[2025-11-23 00:35:12] -rw-r--r--. 2 boinc boinc 410435181 Nov 21 23:14 EVNT.47493065._000186.pool.root.1
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc      6392 Nov 21 23:14 init_data.xml
[2025-11-23 00:35:12] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:14 start_atlas.sh
[2025-11-23 00:35:12] drwxrwx--x. 2 boinc boinc        68 Nov 21 23:14 shared
[2025-11-23 00:35:12] -rw-r--r--. 2 boinc boinc    590106 Nov 21 23:14 input.tar.gz
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc         0 Nov 21 23:14 boinc_lockfile
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc      2773 Nov 21 23:14 pandaJob.out
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc    989798 Nov 21 23:15 agis_schedconf.cvmfs.json
[2025-11-23 00:35:12] drwx------. 5 boinc boinc      4096 Nov 21 23:15 pilot3
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc       533 Nov 23 00:18 boinc_task_state.xml
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc 919541043 Nov 23 00:31 HITS.47493068._001858.pool.root.1
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc      1031 Nov 23 00:32 memory_monitor_summary.json
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc   1526164 Nov 23 00:32 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc   2546786 Nov 23 00:32 log.47493068._001858.job.log.tgz.1
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc      7954 Nov 23 00:34 heartbeat.json
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc        95 Nov 23 00:34 pilot_heartbeat.json
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc      8192 Nov 23 00:34 boinc_mmap_file
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc        29 Nov 23 00:34 wrapper_checkpoint.txt
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc      4884 Nov 23 00:35 pilotlog.txt
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc  12114779 Nov 23 00:35 log.47493068._001858.job.log.1
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc       353 Nov 23 00:35 output.list
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc       620 Nov 23 00:35 runtime_log
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc  14684160 Nov 23 00:35 result.tar.gz
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc      8717 Nov 23 00:35 runtime_log.err
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc       662 Nov 23 00:35 4IxMDmYtcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpKFKDmY2Budn.diag
[2025-11-23 00:35:12] -rw-r--r--. 1 boinc boinc     20780 Nov 23 00:35 stderr.txt
[2025-11-23 00:35:12] HITS file was successfully produced:
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc 919541043 Nov 23 00:31 shared/HITS.pool.root.1
[2025-11-23 00:35:12]  *** Contents of shared directory: ***
[2025-11-23 00:35:12] total 1313744
[2025-11-23 00:35:12] -rw-r--r--. 2 boinc boinc 410435181 Nov 21 23:14 ATLAS.root_0
[2025-11-23 00:35:12] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:14 start_atlas.sh
[2025-11-23 00:35:12] -rw-r--r--. 2 boinc boinc    590106 Nov 21 23:14 input.tar.gz
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc 919541043 Nov 23 00:31 HITS.pool.root.1
[2025-11-23 00:35:12] -rw-------. 1 boinc boinc  14684160 Nov 23 00:35 result.tar.gz
00:35:14 (30381): run_atlas exited; CPU time 334163.432490
00:35:14 (30381): called boinc_finish(0)

</stderr_txt>
]]>

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