Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
15:54:19 (3507163): wrapper (7.7.26015): starting
15:54:19 (3507163): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 15:54:19] Arguments: --nthreads 4
[2025-11-20 15:54:19] Threads: 4
[2025-11-20 15:54:19] Checking for CVMFS
[2025-11-20 15:54:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 15:54:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 15:54:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 15:54:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 15:54:19] 2.13.3.0 1629328 2356 46376 153083 3 81 33544471 33554432 0 130560 0 1018933 99.509 361678 209 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-11-20 15:54:19] CVMFS is ok
[2025-11-20 15:54:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 15:54:19] Checking for apptainer binary...
[2025-11-20 15:54:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 15:54:19] Running /usr/bin/apptainer --version
[2025-11-20 15:54:19] apptainer version 1.4.4
[2025-11-20 15:54:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 15:54:20] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2025-11-20 15:54:20] apptainer works
[2025-11-20 15:54:20] Set ATHENA_PROC_NUMBER=4
[2025-11-20 15:54:20] Set ATHENA_CORE_NUMBER=4
[2025-11-20 15:54:20] Starting ATLAS job with PandaID=6891576578
[2025-11-20 15:54:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 21:28:02]  *** The last 200 lines of the pilot log: ***
[2025-11-20 21:28:02] 2025-11-20 19:27:11,698 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6891576578/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,698 | INFO     | extracted standard info from prmon json
[2025-11-20 21:28:02] 2025-11-20 19:27:11,698 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 21:28:02] 2025-11-20 19:27:11,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 21:28:02] 2025-11-20 19:27:11,700 | INFO     | fitting pss+swap vs Time
[2025-11-20 21:28:02] 2025-11-20 19:27:11,700 | INFO     | sum of square deviations: 10842205148.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,701 | INFO     | sum of deviations: 89854934675.99998
[2025-11-20 21:28:02] 2025-11-20 19:27:11,701 | INFO     | mean x: 1763656827.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,701 | INFO     | mean y: 2312068.2752293576
[2025-11-20 21:28:02] 2025-11-20 19:27:11,701 | INFO     | intersect: -14614019832.638773
[2025-11-20 21:28:02] 2025-11-20 19:27:11,701 | INFO     | chi2: 2.4780922560547873
[2025-11-20 21:28:02] 2025-11-20 19:27:11,701 | INFO     | sum of square deviations: 10352419220.5
[2025-11-20 21:28:02] 2025-11-20 19:27:11,702 | INFO     | sum of deviations: 121449864088.50002
[2025-11-20 21:28:02] 2025-11-20 19:27:11,702 | INFO     | mean x: 1763656674.5
[2025-11-20 21:28:02] 2025-11-20 19:27:11,702 | INFO     | mean y: 2321822.263975155
[2025-11-20 21:28:02] 2025-11-20 19:27:11,702 | INFO     | intersect: -20688094480.87871
[2025-11-20 21:28:02] 2025-11-20 19:27:11,703 | INFO     | chi2: 1.6493464090188195
[2025-11-20 21:28:02] 2025-11-20 19:27:11,703 | INFO     | current chi2=1.6493464090188195 (change=33.44289725336381 %)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,703 | INFO     | sum of square deviations: 9877610318.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | sum of deviations: 117922347151.99997
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | mean x: 1763656522.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | mean y: 2320688.8044164036
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | intersect: -21052824224.655094
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | chi2: 1.6494559290429727
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | current chi2=1.6494559290429727 (change=-0.006640207512160012 %)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | right removable region: 316
[2025-11-20 21:28:02] 2025-11-20 19:27:11,704 | INFO     | sum of square deviations: 10352419220.5
[2025-11-20 21:28:02] 2025-11-20 19:27:11,705 | INFO     | sum of deviations: 39071637192.49997
[2025-11-20 21:28:02] 2025-11-20 19:27:11,705 | INFO     | mean x: 1763656979.5
[2025-11-20 21:28:02] 2025-11-20 19:27:11,705 | INFO     | mean y: 2327772.9223602484
[2025-11-20 21:28:02] 2025-11-20 19:27:11,705 | INFO     | intersect: -6653987448.411595
[2025-11-20 21:28:02] 2025-11-20 19:27:11,705 | INFO     | chi2: 0.8808048055230218
[2025-11-20 21:28:02] 2025-11-20 19:27:11,705 | INFO     | current chi2=0.8808048055230218 (change=64.45633517594317 %)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,705 | INFO     | sum of square deviations: 9877610318.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,706 | INFO     | sum of deviations: 38523996608.00001
[2025-11-20 21:28:02] 2025-11-20 19:27:11,706 | INFO     | mean x: 1763657132.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,706 | INFO     | mean y: 2327946.85488959
[2025-11-20 21:28:02] 2025-11-20 19:27:11,706 | INFO     | intersect: -6876169906.723122
[2025-11-20 21:28:02] 2025-11-20 19:27:11,706 | INFO     | chi2: 0.8794143121825633
[2025-11-20 21:28:02] 2025-11-20 19:27:11,706 | INFO     | current chi2=0.8794143121825633 (change=0.15786623003638275 %)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,706 | INFO     | left removable region: 20
[2025-11-20 21:28:02] 2025-11-20 19:27:11,707 | INFO     | sum of square deviations: 8041713570.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,707 | INFO     | sum of deviations: 69530920699.0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,707 | INFO     | mean x: 1763657101.5
[2025-11-20 21:28:02] 2025-11-20 19:27:11,707 | INFO     | mean y: 2336184.3513513515
[2025-11-20 21:28:02] 2025-11-20 19:27:11,707 | INFO     | intersect: -15246739898.40009
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | chi2: 0.01715319938870198
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | current memory leak: 8.65 B/s (using 296 data points, chi2=0.02)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | could have reported an average CPU frequency of 3969 MHz (15 samples)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | ..............................
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . Timing measurements:
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . get job = 0 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . initial setup = 2 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . payload setup = 2 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . stage-in = 0 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . payload execution = 19942 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . stage-out = 1 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | . log creation = 0 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,708 | INFO     | ..............................
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | 
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | job summary report
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | --------------------------------------------------
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | PanDA job id: 6891576578
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | task id: 47493068
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | errors: (none)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | pilot state: finished 
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | transexitcode: 0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | exeerrorcode: 0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | exeerrordiag: 
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | exitcode: 0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | exitmsg: OK
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | cpuconsumptiontime: 78304 s
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | nevents: 1000
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | neventsw: 0
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | pid: 3517689
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | pgrp: 3517689
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | corecount: 4
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | event service: False
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | sizes: {0: 2298796, 2: 2299058, 11: 2299086, 19948: 2333698, 19949: 2333697, 19950: 2342931, 19952: 2343121}
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | --------------------------------------------------
[2025-11-20 21:28:02] 2025-11-20 19:27:11,738 | INFO     | 
[2025-11-20 21:28:02] 2025-11-20 19:27:11,739 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,748 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,748 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 21:28:02] 2025-11-20 19:27:11,748 | INFO     | job 6891576578 has completed (purged errors)
[2025-11-20 21:28:02] 2025-11-20 19:27:11,748 | INFO     | overall cleanup function is called
[2025-11-20 21:28:02] 2025-11-20 19:27:12,036 | WARNING  | process 3517689 can no longer be monitored (due to stat problems) - aborting
[2025-11-20 21:28:02] 2025-11-20 19:27:12,095 | INFO     | using path: /home/ek/BOINC/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 21:28:02] 2025-11-20 19:27:12,181 | INFO     | number of running child processes to parent process 3517689: 1
[2025-11-20 21:28:02] 2025-11-20 19:27:12,181 | INFO     | maximum number of monitored processes: 10
[2025-11-20 21:28:02] 2025-11-20 19:27:12,181 | INFO     | aborting job monitoring since job object (job id=6891576578) has expired
[2025-11-20 21:28:02] 2025-11-20 19:27:12,757 | INFO     | --- collectZombieJob: --- 10, [3517689]
[2025-11-20 21:28:02] 2025-11-20 19:27:12,757 | INFO     | zombie collector waiting for pid 3517689
[2025-11-20 21:28:02] 2025-11-20 19:27:12,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 21:28:02] 2025-11-20 19:27:12,757 | INFO     | collected zombie processes
[2025-11-20 21:28:02] 2025-11-20 19:27:12,757 | INFO     | will attempt to kill all subprocesses of pid=3517689
[2025-11-20 21:28:02] 2025-11-20 19:27:12,838 | INFO     | process IDs to be killed: [3517689] (in reverse order)
[2025-11-20 21:28:02] 2025-11-20 19:27:12,865 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 21:28:02] 2025-11-20 19:27:12,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 21:28:02] 2025-11-20 19:27:12,868 | INFO     | did not find any defunct processes belonging to 3517689
[2025-11-20 21:28:02] 2025-11-20 19:27:12,870 | INFO     | did not find any defunct processes belonging to 3517689
[2025-11-20 21:28:02] 2025-11-20 19:27:12,870 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 21:28:02] 2025-11-20 19:27:12,870 | INFO     | ready for new job
[2025-11-20 21:28:02] 2025-11-20 19:27:12,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 21:28:02] 2025-11-20 19:27:12,871 | INFO     | ***************************************
[2025-11-20 21:28:02] 2025-11-20 19:27:12,871 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 21:28:02] 2025-11-20 19:27:12,871 | INFO     | ***************************************
[2025-11-20 21:28:02] 2025-11-20 19:27:12,871 | INFO     | 
[2025-11-20 21:28:02] 2025-11-20 19:27:12,872 | INFO     | architecture information:
[2025-11-20 21:28:02] 2025-11-20 19:27:12,872 | INFO     | executing command: cat /etc/os-release
[2025-11-20 21:28:02] 2025-11-20 19:27:12,878 | INFO     | cat /etc/os-release:
[2025-11-20 21:28:02] NAME="CentOS Linux"
[2025-11-20 21:28:02] VERSION="7 (Core)"
[2025-11-20 21:28:02] ID="centos"
[2025-11-20 21:28:02] ID_LIKE="rhel fedora"
[2025-11-20 21:28:02] VERSION_ID="7"
[2025-11-20 21:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 21:28:02] ANSI_COLOR="0;31"
[2025-11-20 21:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 21:28:02] HOME_URL="https://www.centos.org/"
[2025-11-20 21:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 21:28:02] 
[2025-11-20 21:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 21:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 21:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 21:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 21:28:02] 
[2025-11-20 21:28:02] 2025-11-20 19:27:12,878 | INFO     | ***************************************
[2025-11-20 21:28:02] 2025-11-20 19:27:13,381 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2025-11-20 21:28:02] 2025-11-20 19:27:13,388 | INFO     | sufficient remaining disk space (76692848640 B)
[2025-11-20 21:28:02] 2025-11-20 19:27:13,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 21:28:02] 2025-11-20 19:27:13,388 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 21:28:02] 2025-11-20 19:27:13,388 | INFO     | update_server=False
[2025-11-20 21:28:02] 2025-11-20 19:27:13,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 21:28:02] 2025-11-20 19:27:13,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:28:02] 2025-11-20 19:27:13,388 | INFO     | aborting loop
[2025-11-20 21:28:02] 2025-11-20 19:27:13,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 21:28:02] 2025-11-20 19:27:13,389 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-20 21:28:02] 2025-11-20 19:27:13,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:28:02] 2025-11-20 19:27:13,389 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 21:28:02] 2025-11-20 19:27:13,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 21:28:02] 2025-11-20 19:27:13,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 21:28:02] 2025-11-20 19:27:13,487 | INFO     | all job control threads have been joined
[2025-11-20 21:28:02] 2025-11-20 19:27:13,684 | INFO     | all data control threads have been joined
[2025-11-20 21:28:02] 2025-11-20 19:27:14,393 | INFO     | [job] retrieve thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:14,394 | INFO     | [job] job monitor thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:14,394 | INFO     | [job] queue monitor thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:14,492 | INFO     | [job] control thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:14,505 | INFO     | [data] copytool_in thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:14,689 | INFO     | [data] control thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:14,885 | INFO     | all payload control threads have been joined
[2025-11-20 21:28:02] 2025-11-20 19:27:15,017 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:15,160 | INFO     | [payload] failed_post thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:15,394 | INFO     | [data] copytool_out thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:15,588 | INFO     | [job] validate thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:15,589 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:15,640 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:15,734 | INFO     | [payload] validate_post thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:15,890 | INFO     | [payload] control thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:16,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 21:28:02] 2025-11-20 19:27:20,019 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:24,329 | INFO     | job.realtimelogging is not enabled
[2025-11-20 21:28:02] 2025-11-20 19:27:25,334 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 21:28:02] 2025-11-20 19:27:56,649 | INFO     | [monitor] cgroup control has ended
[2025-11-20 21:28:02] 2025-11-20 19:27:57,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074915698496)>', '<ExcThread(monitor, started 140074410813184)>']
[2025-11-20 21:28:02] 2025-11-20 19:27:58,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 21:28:02] 2025-11-20 19:27:58,605 | INFO     | [monitor] control thread has ended
[2025-11-20 21:28:02] 2025-11-20 19:28:02,789 | INFO     | all workflow threads have been joined
[2025-11-20 21:28:02] 2025-11-20 19:28:02,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 21:28:02] 2025-11-20 19:28:02,789 | INFO     | traces error code: 0
[2025-11-20 21:28:02] 2025-11-20 19:28:02,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 21:28:02] 2025-11-20 19:28:02,839 [wrapper] ==== pilot stdout END ====
[2025-11-20 21:28:02] 2025-11-20 19:28:02,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 21:28:02] 2025-11-20 19:28:02,842 [wrapper] pilotpid: 3511001
[2025-11-20 21:28:02] 2025-11-20 19:28:02,843 [wrapper] Pilot exit status: 0
[2025-11-20 21:28:02] 2025-11-20 19:28:02,848 [wrapper] pandaids: 6891576578
[2025-11-20 21:28:02] 2025-11-20 19:28:02,869 [wrapper] cleanup supervisor_pilot 3764955 3511002
[2025-11-20 21:28:02] 2025-11-20 19:28:02,870 [wrapper] Test setup, not cleaning
[2025-11-20 21:28:02] 2025-11-20 19:28:02,872 [wrapper] apfmon messages muted
[2025-11-20 21:28:02] 2025-11-20 19:28:02,873 [wrapper] ==== wrapper stdout END ====
[2025-11-20 21:28:02] 2025-11-20 19:28:02,874 [wrapper] ==== wrapper stderr END ====
[2025-11-20 21:28:02]  *** Error codes and diagnostics ***
[2025-11-20 21:28:02]     "exeErrorCode": 0,
[2025-11-20 21:28:02]     "exeErrorDiag": "",
[2025-11-20 21:28:02]     "pilotErrorCode": 0,
[2025-11-20 21:28:02]     "pilotErrorDiag": "",
[2025-11-20 21:28:02]  *** Listing of results directory ***
[2025-11-20 21:28:02] total 1313944
[2025-11-20 21:28:02] -rw-r--r-- 1 ek ek    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-20 21:28:02] -rw-r--r-- 1 ek ek      5112 Nov 18 18:38 queuedata.json
[2025-11-20 21:28:02] -rwx------ 1 ek ek     36292 Nov 18 18:39 runpilot2-wrapper.sh
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek       100 Nov 20 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 21:28:02] -rwxr-xr-x 1 ek ek      7986 Nov 20 15:54 run_atlas
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek       105 Nov 20 15:54 job.xml
[2025-11-20 21:28:02] -rw-r--r-- 2 ek ek 409901214 Nov 20 15:54 EVNT.47493065._000369.pool.root.1
[2025-11-20 21:28:02] -rw-r--r-- 2 ek ek    590104 Nov 20 15:54 input.tar.gz
[2025-11-20 21:28:02] -rw-r--r-- 2 ek ek     15120 Nov 20 15:54 start_atlas.sh
[2025-11-20 21:28:02] drwxrwx--x 2 ek ek      4096 Nov 20 15:54 shared
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek         0 Nov 20 15:54 boinc_setup_complete
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek      9843 Nov 20 15:54 init_data.xml
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek         0 Nov 20 15:54 boinc_lockfile
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek      2773 Nov 20 15:54 pandaJob.out
[2025-11-20 21:28:02] -rw------- 1 ek ek    989448 Nov 20 15:54 agis_schedconf.cvmfs.json
[2025-11-20 21:28:02] drwx------ 5 ek ek      4096 Nov 20 15:54 pilot3
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek       531 Nov 20 21:24 boinc_task_state.xml
[2025-11-20 21:28:02] -rw------- 1 ek ek        95 Nov 20 21:26 pilot_heartbeat.json
[2025-11-20 21:28:02] -rw------- 1 ek ek 923672672 Nov 20 21:26 HITS.47493068._003687.pool.root.1
[2025-11-20 21:28:02] -rw------- 1 ek ek      1042 Nov 20 21:27 memory_monitor_summary.json
[2025-11-20 21:28:02] -rw------- 1 ek ek   1526164 Nov 20 21:27 agis_ddmendpoints.agis.ALL.json
[2025-11-20 21:28:02] -rw------- 1 ek ek   1182826 Nov 20 21:27 log.47493068._003687.job.log.tgz.1
[2025-11-20 21:28:02] -rw------- 1 ek ek      8603 Nov 20 21:27 heartbeat.json
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek      8192 Nov 20 21:27 boinc_mmap_file
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek        28 Nov 20 21:27 wrapper_checkpoint.txt
[2025-11-20 21:28:02] -rw------- 1 ek ek      4624 Nov 20 21:28 pilotlog.txt
[2025-11-20 21:28:02] -rw------- 1 ek ek   2805935 Nov 20 21:28 log.47493068._003687.job.log.1
[2025-11-20 21:28:02] -rw------- 1 ek ek       353 Nov 20 21:28 output.list
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek       620 Nov 20 21:28 runtime_log
[2025-11-20 21:28:02] -rw------- 1 ek ek   4003840 Nov 20 21:28 result.tar.gz
[2025-11-20 21:28:02] -rw------- 1 ek ek       673 Nov 20 21:28 zXANDmbudf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJrFKDmHBixbm.diag
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek      8899 Nov 20 21:28 runtime_log.err
[2025-11-20 21:28:02] -rw-rw-r-- 1 ek ek     21032 Nov 20 21:28 stderr.txt
[2025-11-20 21:28:02] HITS file was successfully produced:
[2025-11-20 21:28:02] -rw------- 1 ek ek 923672672 Nov 20 21:26 shared/HITS.pool.root.1
[2025-11-20 21:28:02]  *** Contents of shared directory: ***
[2025-11-20 21:28:02] total 1306840
[2025-11-20 21:28:02] -rw-r--r-- 2 ek ek 409901214 Nov 20 15:54 ATLAS.root_0
[2025-11-20 21:28:02] -rw-r--r-- 2 ek ek    590104 Nov 20 15:54 input.tar.gz
[2025-11-20 21:28:02] -rw-r--r-- 2 ek ek     15120 Nov 20 15:54 start_atlas.sh
[2025-11-20 21:28:02] -rw------- 1 ek ek 923672672 Nov 20 21:26 HITS.pool.root.1
[2025-11-20 21:28:02] -rw------- 1 ek ek   4003840 Nov 20 21:28 result.tar.gz
21:28:03 (3507163): run_atlas exited; CPU time 78386.769811
21:28:03 (3507163): called boinc_finish(0)

</stderr_txt>
]]>

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