Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-20 21:04:54 (7740): vboxwrapper version 26210
2025-11-20 21:04:54 (7740): BOINC client version: 8.2.4
2025-11-20 21:04:55 (7740): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-11-20 21:04:55 (7740): Successfully copied 'init_data.xml' to the shared directory.
2025-11-20 21:04:55 (7740): Create VM. (boinc_8c88c883d92b306c, slot#0)
2025-11-20 21:04:56 (7740): Setting Memory Size for VM. (4800MB)
2025-11-20 21:04:56 (7740): Setting CPU Count for VM. (8)
2025-11-20 21:04:56 (7740): Setting Chipset Options for VM.
2025-11-20 21:04:56 (7740): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-20 21:04:57 (7740): Setting Boot Options for VM.
2025-11-20 21:04:57 (7740): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-20 21:04:57 (7740): Enabling VM Network Access.
2025-11-20 21:04:58 (7740): Disabling USB Support for VM.
2025-11-20 21:04:58 (7740): Disabling COM Port Support for VM.
2025-11-20 21:04:58 (7740): Disabling LPT Port Support for VM.
2025-11-20 21:04:58 (7740): Disabling Audio Support for VM.
2025-11-20 21:04:59 (7740): Disabling Clipboard Support for VM.
2025-11-20 21:04:59 (7740): Disabling Drag and Drop Support for VM.
2025-11-20 21:04:59 (7740): Adding storage controller(s) to VM.
2025-11-20 21:04:59 (7740): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-20 21:05:01 (7740): Adding VirtualBox Guest Additions to VM.
2025-11-20 21:05:02 (7740): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-20 21:05:02 (7740): forwarding host port 58484 to guest port 80
2025-11-20 21:05:02 (7740): Enabling remote desktop for VM.
2025-11-20 21:05:02 (7740): Required extension pack not installed, remote desktop not enabled.
2025-11-20 21:05:02 (7740): Enabling shared directory for VM.
2025-11-20 21:05:03 (7740): Starting VM using VBoxManage interface. (boinc_8c88c883d92b306c, slot#0)
2025-11-20 21:05:09 (7740): Successfully started VM. (PID = '6312')
2025-11-20 21:05:09 (7740): Reporting VM Process ID to BOINC.
2025-11-20 21:05:09 (7740): Guest Log: BIOS: VirtualBox 7.0.6
2025-11-20 21:05:09 (7740): Guest Log: CPUID EDX: 0x178bfbff
2025-11-20 21:05:09 (7740): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-20 21:05:09 (7740): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-20 21:05:09 (7740): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-20 21:05:09 (7740): Detected: Web Application Enabled (http://localhost:58484)
2025-11-20 21:05:09 (7740): Preference change detected
2025-11-20 21:05:09 (7740): Setting CPU throttle for VM. (100%)
2025-11-20 21:05:10 (7740): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-20 21:05:11 (7740): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-20 21:05:11 (7740): Guest Log: BIOS: Booting from Hard Disk...
2025-11-20 21:05:14 (7740): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-20 21:05:14 (7740): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-20 21:05:14 (7740): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-20 21:05:19 (7740): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-20 21:05:19 (7740): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-20 21:05:25 (7740): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.000138 main     Log opened 2025-11-20T21:05:23.558639000Z
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.000235 main     OS Product: Linux
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.000260 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.000281 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.000302 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.000303 main     Process ID: 1370
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.000304 main     Package type: LINUX_64BITS_GENERIC
2025-11-20 21:05:25 (7740): Guest Log: 00:00:00.001463 main     5.2.32 r132073 started. Verbose level = 0
2025-11-20 21:05:25 (7740): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-20 21:05:25 (7740): Guest Log: [INFO] Mounting shared directory
2025-11-20 21:05:25 (7740): Guest Log: [INFO] Checking for init_data.xml
2025-11-20 21:05:30 (7740): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-20 21:05:30 (7740): Guest Log: [INFO] Detected branch: prod
2025-11-20 21:05:30 (7740): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-20 21:05:30 (7740): Guest Log: Copying input files
2025-11-20 21:05:32 (7740): Guest Log: Copied input files into RunAtlas.
2025-11-20 21:05:32 (7740): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-20 21:05:32 (7740): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-20 21:05:32 (7740): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-20 21:05:32 (7740): Guest Log: Further information can be found at the LHC@home message board.
2025-11-20 21:05:35 (7740): Guest Log: 00:00:10.003735 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 384 311 000ns (GuestNow=1 763 701 534 945 748 000 ns GuestLast=1 763 672 723 561 437 000 ns fSetTimeLastLoop=true )
2025-11-20 21:05:41 (7740): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-20 21:05:42 (7740): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-20 21:05:42 (7740): Guest Log: 2.6.3.0 1650 0 30024 153108 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-20 21:05:42 (7740): Guest Log: copied the webapp to /var/www
2025-11-20 21:05:42 (7740): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-20 21:05:42 (7740): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-20 21:05:42 (7740): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-20 21:05:42 (7740): Guest Log:  *** Starting ATLAS job. (PandaID=6891588126 taskID=47493068) ***
2025-11-20 22:45:35 (7740): Status Report: Elapsed Time: '6000.000000'
2025-11-20 22:45:35 (7740): Status Report: CPU Time: '32038.765625'
2025-11-21 00:25:38 (7740): Status Report: Elapsed Time: '12000.000000'
2025-11-21 00:25:38 (7740): Status Report: CPU Time: '79694.359375'
2025-11-21 01:55:48 (7740): VM state change detected. (old = 'running', new = 'paused')
2025-11-21 01:59:24 (7740): Preference change detected
2025-11-21 01:59:24 (7740): Setting CPU throttle for VM. (100%)
2025-11-21 01:59:24 (7740): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-21 01:59:24 (7740): VM state change detected. (old = 'paused', new = 'running')
2025-11-21 02:01:35 (7740): VM state change detected. (old = 'running', new = 'paused')
2025-11-21 02:04:35 (7740): VM state change detected. (old = 'paused', new = 'running')
2025-11-21 02:12:19 (7740): Status Report: Elapsed Time: '18000.000000'
2025-11-21 02:12:19 (7740): Status Report: CPU Time: '127340.828125'
2025-11-21 03:52:27 (7740): Status Report: Elapsed Time: '24000.000000'
2025-11-21 03:52:27 (7740): Status Report: CPU Time: '175102.515625'
2025-11-21 05:32:30 (7740): Status Report: Elapsed Time: '30000.000000'
2025-11-21 05:32:30 (7740): Status Report: CPU Time: '222822.125000'
2025-11-21 07:12:34 (7740): Status Report: Elapsed Time: '36000.000000'
2025-11-21 07:12:34 (7740): Status Report: CPU Time: '270541.875000'
2025-11-21 08:39:45 (7740): Guest Log:  *** Job finished ***
2025-11-21 08:39:45 (7740): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:12,815 | INFO     | all workflow threads have been joined
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:12,815 | INFO     | end of generic workflow (traces error code: 0)
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:12,815 | INFO     | traces error code: 0
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:12,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,874 | INFO     | PID=6089 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,875 | INFO     | found 0 job(s) in 20 queues
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,875 | INFO     | [monitor] control thread has ended
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,973 [wrapper] ==== pilot stdout END ====
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,978 [wrapper] ==== wrapper stdout RESUME ====
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,982 [wrapper] pilotpid: 6089
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:17,986 [wrapper] Pilot exit status: 0
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:18,000 [wrapper] pandaids: 6891588126
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:18,027 [wrapper] cleanup supervisor_pilot 24388 6090
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:18,032 [wrapper] Test setup, not cleaning
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:18,036 [wrapper] apfmon messages muted
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:18,040 [wrapper] ==== wrapper stdout END ====
2025-11-21 08:39:45 (7740): Guest Log: 2025-11-21 16:33:18,043 [wrapper] ==== wrapper stderr END ====
2025-11-21 08:39:45 (7740): Guest Log:  *** Error codes and diagnostics ***
2025-11-21 08:39:45 (7740): Guest Log:     "exeErrorCode": 0,
2025-11-21 08:39:45 (7740): Guest Log:     "exeErrorDiag": "",
2025-11-21 08:39:45 (7740): Guest Log:     "pilotErrorCode": 0,
2025-11-21 08:39:45 (7740): Guest Log:     "pilotErrorDiag": "",
2025-11-21 08:39:45 (7740): Guest Log:  *** Listing of results directory ***
2025-11-21 08:39:45 (7740): Guest Log: total 921648
2025-11-21 08:39:45 (7740): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 18 17:24 pilot3.tar.gz
2025-11-21 08:39:45 (7740): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 18 17:35 queuedata.json
2025-11-21 08:39:45 (7740): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 18 17:37 runpilot2-wrapper.sh
2025-11-21 08:39:45 (7740): Guest Log: -rwxr-xr-x. 1 atlas atlas      8875 Nov 21 05:05 init_data.xml
2025-11-21 08:39:45 (7740): Guest Log: -rwxr-xr-x. 1 atlas atlas    590101 Nov 21 05:05 input.tar.gz
2025-11-21 08:39:45 (7740): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 21 05:05 start_atlas.sh
2025-11-21 08:39:45 (7740): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 21 05:05 EVNT.47493065._000509.pool.root.1 -> /data/./ATLAS.root_0
2025-11-21 08:39:45 (7740): Guest Log: -rw-r--r--. 1 atlas atlas      2773 Nov 21 05:05 pandaJob.out
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas    989817 Nov 21 05:06 agis_schedconf.cvmfs.json
2025-11-21 08:39:45 (7740): Guest Log: drwx------. 5 atlas atlas      4096 Nov 21 05:06 pilot3
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas 925453222 Nov 21 16:32 HITS.47493068._005084.pool.root.1
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas      1056 Nov 21 16:32 memory_monitor_summary.json
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas        95 Nov 21 16:32 pilot_heartbeat.json
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 21 16:32 agis_ddmendpoints.agis.ALL.json
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas   1914728 Nov 21 16:32 log.47493068._005084.job.log.tgz.1
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas      8695 Nov 21 16:32 heartbeat.json
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas       744 Nov 21 16:33 pilotlog.txt
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas   5318692 Nov 21 16:33 log.47493068._005084.job.log.1
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas       353 Nov 21 16:33 output.list
2025-11-21 08:39:45 (7740): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 21 16:33 runtime_log
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas   7249920 Nov 21 16:33 result.tar.gz
2025-11-21 08:39:45 (7740): Guest Log: -rw-r--r--. 1 atlas atlas      8652 Nov 21 16:33 runtime_log.err
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas       665 Nov 21 16:33 qicNDmRpef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW6FKDmngJkln.diag
2025-11-21 08:39:45 (7740): Guest Log: Looking for outputfile HITS.47493068._005084.pool.root.1
2025-11-21 08:39:45 (7740): Guest Log: HITS file was successfully produced
2025-11-21 08:39:45 (7740): Guest Log: -rw-------. 1 atlas atlas 925453222 Nov 21 16:32 /home/atlas/RunAtlas/HITS.47493068._005084.pool.root.1
2025-11-21 08:39:48 (7740): Guest Log: Successfully finished the ATLAS job!
2025-11-21 08:39:48 (7740): Guest Log: Copying the results back to the shared directory!
2025-11-21 08:39:49 (7740): Guest Log:  *** Contents of shared directory: ***
2025-11-21 08:39:49 (7740): Guest Log: total 1309400
2025-11-21 08:39:49 (7740): Guest Log: -rwxrwxrwx. 1 root root 407495797 Nov 21 05:04 ATLAS.root_0
2025-11-21 08:39:49 (7740): Guest Log: -rwxrwxrwx. 1 root root 925453222 Nov 21  2025 HITS.pool.root.1
2025-11-21 08:39:49 (7740): Guest Log: -rwxrwxrwx. 1 root root      8875 Nov 21 05:04 init_data.xml
2025-11-21 08:39:49 (7740): Guest Log: -rwxrwxrwx. 1 root root    590101 Nov 18 22:59 input.tar.gz
2025-11-21 08:39:49 (7740): Guest Log: -rwxrwxrwx. 1 root root   7249920 Nov 21  2025 result.tar.gz
2025-11-21 08:39:49 (7740): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 18 22:59 start_atlas.sh
2025-11-21 08:39:49 (7740): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-21 08:39:49 (7740): VM Completion File Detected.
2025-11-21 08:39:49 (7740): Powering off VM.
2025-11-21 08:39:49 (7740): Successfully stopped VM.
2025-11-21 08:39:49 (7740): Deregistering VM. (boinc_8c88c883d92b306c, slot#0)
2025-11-21 08:39:49 (7740): Removing network bandwidth throttle group from VM.
2025-11-21 08:39:49 (7740): Removing VM from VirtualBox.
2025-11-21 08:39:55 (7740): called boinc_finish(0)

</stderr_txt>
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