Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:34:02 (4134): wrapper (7.7.26015): starting
23:34:02 (4134): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:34:02] Arguments: --nthreads 8
[2025-11-21 23:34:02] Threads: 8
[2025-11-21 23:34:02] Checking for CVMFS
[2025-11-21 23:34:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:34:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:34:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:34:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:34:04] 2.11.2.0 18802 278726 140752 153145 2 247 25073459 25165824 3871 130560 2 137315020 99.892 73138032 2826 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 23:34:04] CVMFS is ok
[2025-11-21 23:34:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:34:04] Checking for apptainer binary...
[2025-11-21 23:34:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:34:04] Running /usr/bin/apptainer --version
[2025-11-21 23:34:04] apptainer version 1.3.2-1.el7
[2025-11-21 23:34:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:34:08] cg-vwn230.simple-grid.lan
[2025-11-21 23:34:08] apptainer works
[2025-11-21 23:34:08] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:34:08] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:34:09] Starting ATLAS job with PandaID=6891591944
[2025-11-21 23:34:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:36:22]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:36:22] 2025-11-23 00:35:33,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:36:22] 2025-11-23 00:35:34,538 | INFO     | time since job start (93483s) is within the limit (172800.0s)
[2025-11-23 01:36:22] 2025-11-23 00:35:35,993 | INFO     | monitor loop #6269: job 0:6891591944 is in state 'finished'
[2025-11-23 01:36:22] 2025-11-23 00:35:35,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:36:22] 2025-11-23 00:35:36,545 | INFO     | time since job start (93485s) is within the limit (172800.0s)
[2025-11-23 01:36:22] 2025-11-23 00:35:38,500 | INFO     | monitor loop #6270: job 0:6891591944 is in state 'finished'
[2025-11-23 01:36:22] 2025-11-23 00:35:38,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:36:22] 2025-11-23 00:35:38,557 | INFO     | time since job start (93487s) is within the limit (172800.0s)
[2025-11-23 01:36:22] 2025-11-23 00:35:40,565 | INFO     | time since job start (93489s) is within the limit (172800.0s)
[2025-11-23 01:36:22] 2025-11-23 00:35:41,010 | INFO     | monitor loop #6271: job 0:6891591944 is in state 'finished'
[2025-11-23 01:36:22] 2025-11-23 00:35:41,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:36:22] 2025-11-23 00:35:42,574 | INFO     | time since job start (93491s) is within the limit (172800.0s)
[2025-11-23 01:36:22] 2025-11-23 00:35:43,518 | INFO     | monitor loop #6272: job 0:6891591944 is in state 'finished'
[2025-11-23 01:36:22] 2025-11-23 00:35:43,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:36:22] 2025-11-23 00:35:43,770 | INFO     | PID=7916 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 01:36:22] 2025-11-23 00:35:43,771 | INFO     | .. there are 9 such processes running
[2025-11-23 01:36:22] 2025-11-23 00:35:43,938 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:36:22] 2025-11-23 00:35:43,939 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 01:36:22] 2025-11-23 00:35:43,941 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6891591944/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:36:22] 2025-11-23 00:35:43,942 | INFO     | extracted standard info from prmon json
[2025-11-23 01:36:22] 2025-11-23 00:35:43,942 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:36:22] 2025-11-23 00:35:43,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:36:22] 2025-11-23 00:35:43,971 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:36:22] 2025-11-23 00:35:43,974 | INFO     | sum of square deviations: 1097571358214.6426
[2025-11-23 01:36:22] 2025-11-23 00:35:44,057 | INFO     | sum of deviations: 3036713723512.713
[2025-11-23 01:36:22] 2025-11-23 00:35:44,058 | INFO     | mean x: 1763811536.6627297
[2025-11-23 01:36:22] 2025-11-23 00:35:44,058 | INFO     | mean y: 2856967.2854330707
[2025-11-23 01:36:22] 2025-11-23 00:35:44,058 | INFO     | intersect: -4877181728.13604
[2025-11-23 01:36:22] 2025-11-23 00:35:44,060 | INFO     | chi2: 16.93599457471709
[2025-11-23 01:36:22] 2025-11-23 00:35:44,062 | INFO     | sum of square deviations: 1086804422362.86
[2025-11-23 01:36:22] 2025-11-23 00:35:44,134 | INFO     | sum of deviations: 3538108844268.646
[2025-11-23 01:36:22] 2025-11-23 00:35:44,135 | INFO     | mean x: 1763811384.1665568
[2025-11-23 01:36:22] 2025-11-23 00:35:44,135 | INFO     | mean y: 2864067.8630678076
[2025-11-23 01:36:22] 2025-11-23 00:35:44,135 | INFO     | intersect: -5739251559.872051
[2025-11-23 01:36:22] 2025-11-23 00:35:44,137 | INFO     | chi2: 13.745140905698124
[2025-11-23 01:36:22] 2025-11-23 00:35:44,137 | INFO     | current chi2=13.745140905698124 (change=18.840663032464793 %)
[2025-11-23 01:36:22] 2025-11-23 00:35:44,137 | INFO     | right removable region: 1518
[2025-11-23 01:36:22] 2025-11-23 00:35:44,139 | INFO     | sum of square deviations: 1086803341442.8601
[2025-11-23 01:36:22] 2025-11-23 00:35:44,201 | INFO     | sum of deviations: 2521021882721.6484
[2025-11-23 01:36:22] 2025-11-23 00:35:44,201 | INFO     | mean x: 1763811689.1665568
[2025-11-23 01:36:22] 2025-11-23 00:35:44,201 | INFO     | mean y: 2864267.926267281
[2025-11-23 01:36:22] 2025-11-23 00:35:44,201 | INFO     | intersect: -4088591560.214384
[2025-11-23 01:36:22] 2025-11-23 00:35:44,203 | INFO     | chi2: 13.924834293889008
[2025-11-23 01:36:22] 2025-11-23 00:35:44,203 | INFO     | current chi2=13.924834293889008 (change=17.77964835512698 %)
[2025-11-23 01:36:22] 2025-11-23 00:35:44,204 | INFO     | left removable region: 10
[2025-11-23 01:36:22] 2025-11-23 00:35:44,206 | INFO     | sum of square deviations: 1063363924230.8589
[2025-11-23 01:36:22] 2025-11-23 00:35:44,270 | INFO     | sum of deviations: 2982267638534.1772
[2025-11-23 01:36:22] 2025-11-23 00:35:44,270 | INFO     | mean x: 1763811658.6710875
[2025-11-23 01:36:22] 2025-11-23 00:35:44,271 | INFO     | mean y: 2875186.072944297
[2025-11-23 01:36:22] 2025-11-23 00:35:44,271 | INFO     | intersect: -4943839960.323239
[2025-11-23 01:36:22] 2025-11-23 00:35:44,272 | INFO     | chi2: 9.757544782012417
[2025-11-23 01:36:22] 2025-11-23 00:35:44,273 | INFO     | current memory leak: 2.80 B/s (using 1508 data points, chi2=9.76)
[2025-11-23 01:36:22] 2025-11-23 00:35:44,275 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 01:36:22] 2025-11-23 00:35:44,275 | INFO     | ..............................
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . Timing measurements:
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . get job = 0 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . initial setup = 7 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . payload setup = 133 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . stage-in = 0 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . payload execution = 93066 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . stage-out = 6 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | . log creation = 2 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,276 | INFO     | ..............................
[2025-11-23 01:36:22] 2025-11-23 00:35:44,410 | INFO     | 
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | job summary report
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | --------------------------------------------------
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | PanDA job id: 6891591944
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | task id: 47493068
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | errors: (none)
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | pilot state: finished 
[2025-11-23 01:36:22] 2025-11-23 00:35:44,411 | INFO     | transexitcode: 0
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | exeerrorcode: 0
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | exeerrordiag: 
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | exitcode: 0
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | exitmsg: OK
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | cpuconsumptiontime: 344849 s
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | nevents: 1000
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | neventsw: 0
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | pid: 14460
[2025-11-23 01:36:22] 2025-11-23 00:35:44,412 | INFO     | pgrp: 14460
[2025-11-23 01:36:22] 2025-11-23 00:35:44,413 | INFO     | corecount: 8
[2025-11-23 01:36:22] 2025-11-23 00:35:44,413 | INFO     | event service: False
[2025-11-23 01:36:22] 2025-11-23 00:35:44,413 | INFO     | sizes: {0: 2298569, 1: 2298824, 12: 2298824, 23: 2298852, 34: 2298880, 44: 2298908, 55: 2299064, 66: 2299092, 77: 2299120, 88: 2299466, 98: 2299466, 93203: 2364311
[2025-11-23 01:36:22] 2025-11-23 00:35:44,413 | INFO     | --------------------------------------------------
[2025-11-23 01:36:22] 2025-11-23 00:35:44,413 | INFO     | 
[2025-11-23 01:36:22] 2025-11-23 00:35:44,413 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-23 01:36:22] 2025-11-23 00:35:44,540 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,540 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:36:22] 2025-11-23 00:35:44,543 | INFO     | job 6891591944 has completed (purged errors)
[2025-11-23 01:36:22] 2025-11-23 00:35:44,543 | INFO     | overall cleanup function is called
[2025-11-23 01:36:22] 2025-11-23 00:35:45,565 | INFO     | --- collectZombieJob: --- 10, [14460]
[2025-11-23 01:36:22] 2025-11-23 00:35:45,566 | INFO     | zombie collector waiting for pid 14460
[2025-11-23 01:36:22] 2025-11-23 00:35:45,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:36:22] 2025-11-23 00:35:45,566 | INFO     | collected zombie processes
[2025-11-23 01:36:22] 2025-11-23 00:35:45,566 | INFO     | will attempt to kill all subprocesses of pid=14460
[2025-11-23 01:36:22] 2025-11-23 00:35:45,691 | INFO     | process IDs to be killed: [14460] (in reverse order)
[2025-11-23 01:36:22] 2025-11-23 00:35:46,238 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:36:22] 2025-11-23 00:35:46,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:36:22] 2025-11-23 00:35:46,242 | INFO     | did not find any defunct processes belonging to 14460
[2025-11-23 01:36:22] 2025-11-23 00:35:46,246 | INFO     | did not find any defunct processes belonging to 14460
[2025-11-23 01:36:22] 2025-11-23 00:35:46,249 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:36:22] 2025-11-23 00:35:46,249 | INFO     | ready for new job
[2025-11-23 01:36:22] 2025-11-23 00:35:46,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:36:22] 2025-11-23 00:35:46,256 | INFO     | ***************************************
[2025-11-23 01:36:22] 2025-11-23 00:35:46,256 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:36:22] 2025-11-23 00:35:46,256 | INFO     | ***************************************
[2025-11-23 01:36:22] 2025-11-23 00:35:46,256 | INFO     | 
[2025-11-23 01:36:22] 2025-11-23 00:35:46,257 | INFO     | pilot is running in a VM
[2025-11-23 01:36:22] 2025-11-23 00:35:46,257 | INFO     | architecture information:
[2025-11-23 01:36:22] 2025-11-23 00:35:46,258 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:36:22] 2025-11-23 00:35:46,280 | INFO     | cat /etc/os-release:
[2025-11-23 01:36:22] NAME="CentOS Linux"
[2025-11-23 01:36:22] VERSION="7 (Core)"
[2025-11-23 01:36:22] ID="centos"
[2025-11-23 01:36:22] ID_LIKE="rhel fedora"
[2025-11-23 01:36:22] VERSION_ID="7"
[2025-11-23 01:36:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:36:22] ANSI_COLOR="0;31"
[2025-11-23 01:36:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:36:22] HOME_URL="https://www.centos.org/"
[2025-11-23 01:36:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:36:22] 
[2025-11-23 01:36:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:36:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:36:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:36:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:36:22] 
[2025-11-23 01:36:22] 2025-11-23 00:35:46,280 | INFO     | ***************************************
[2025-11-23 01:36:22] 2025-11-23 00:35:46,784 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-23 01:36:22] 2025-11-23 00:35:46,942 | INFO     | sufficient remaining disk space (495074672640 B)
[2025-11-23 01:36:22] 2025-11-23 00:35:46,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:36:22] 2025-11-23 00:35:46,943 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:36:22] 2025-11-23 00:35:46,943 | INFO     | update_server=False
[2025-11-23 01:36:22] 2025-11-23 00:35:46,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:36:22] 2025-11-23 00:35:46,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:36:22] 2025-11-23 00:35:47,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:36:22] 2025-11-23 00:35:47,029 | INFO     | aborting loop
[2025-11-23 01:36:22] 2025-11-23 00:35:47,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:36:22] 2025-11-23 00:35:47,158 | INFO     | all payload control threads have been joined
[2025-11-23 01:36:22] 2025-11-23 00:35:47,850 | INFO     | all data control threads have been joined
[2025-11-23 01:36:22] 2025-11-23 00:35:47,950 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,035 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,041 | INFO     | all job control threads have been joined
[2025-11-23 01:36:22] 2025-11-23 00:35:48,072 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,108 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,165 | INFO     | [payload] control thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,611 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,617 | INFO     | [job] validate thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,658 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,781 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:48,856 | INFO     | [data] control thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:49,047 | INFO     | [job] control thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:49,090 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:49,142 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:49,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:36:22] 2025-11-23 00:35:50,429 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:35:50,960 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:36:22] 2025-11-23 00:36:13,589 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:36:22] 2025-11-23 00:36:14,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497823713088)>', '<ExcThread(monitor, started 140497163118336)>']
[2025-11-23 01:36:22] 2025-11-23 00:36:15,979 | INFO     | PID=7916 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 01:36:22] 2025-11-23 00:36:15,980 | INFO     | .. there are 9 such processes running
[2025-11-23 01:36:22] 2025-11-23 00:36:15,980 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:36:22] 2025-11-23 00:36:15,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:36:22] 2025-11-23 00:36:15,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:36:22] 2025-11-23 00:36:15,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:36:22] 2025-11-23 00:36:15,981 | INFO     | [monitor] control thread has ended
[2025-11-23 01:36:22] 2025-11-23 00:36:19,772 | INFO     | all workflow threads have been joined
[2025-11-23 01:36:22] 2025-11-23 00:36:19,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:36:22] 2025-11-23 00:36:19,773 | INFO     | traces error code: 0
[2025-11-23 01:36:22] 2025-11-23 00:36:19,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:36:22] 2025-11-23 00:36:20,090 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:36:22] 2025-11-23 00:36:20,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:36:22] 2025-11-23 00:36:20,115 [wrapper] pilotpid: 7916
[2025-11-23 01:36:22] 2025-11-23 00:36:20,127 [wrapper] Pilot exit status: 0
[2025-11-23 01:36:22] 2025-11-23 00:36:20,148 [wrapper] pandaids: 6891591944
[2025-11-23 01:36:22] 2025-11-23 00:36:20,191 [wrapper] cleanup supervisor_pilot 23280 7917
[2025-11-23 01:36:22] 2025-11-23 00:36:20,312 [wrapper] Test setup, not cleaning
[2025-11-23 01:36:22] 2025-11-23 00:36:20,357 [wrapper] apfmon messages muted
[2025-11-23 01:36:22] 2025-11-23 00:36:20,410 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:36:22] 2025-11-23 00:36:20,468 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:36:22]  *** Error codes and diagnostics ***
[2025-11-23 01:36:22]     "exeErrorCode": 0,
[2025-11-23 01:36:22]     "exeErrorDiag": "",
[2025-11-23 01:36:22]     "pilotErrorCode": 0,
[2025-11-23 01:36:22]     "pilotErrorDiag": "",
[2025-11-23 01:36:22]  *** Listing of results directory ***
[2025-11-23 01:36:22] total 1342808
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc      5112 Nov 18 19:15 queuedata.json
[2025-11-23 01:36:22] -rwx------. 1 boinc boinc     36292 Nov 18 19:16 runpilot2-wrapper.sh
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc       100 Nov 21 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:36:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 23:34 run_atlas
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc       105 Nov 21 23:34 job.xml
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc      6391 Nov 21 23:34 init_data.xml
[2025-11-23 01:36:22] -rw-r--r--. 2 boinc boinc 409451931 Nov 21 23:34 EVNT.47493065._000629.pool.root.1
[2025-11-23 01:36:22] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:34 start_atlas.sh
[2025-11-23 01:36:22] drwxrwx--x. 2 boinc boinc        68 Nov 21 23:34 shared
[2025-11-23 01:36:22] -rw-r--r--. 2 boinc boinc    590099 Nov 21 23:34 input.tar.gz
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc         0 Nov 21 23:34 boinc_lockfile
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc      2773 Nov 21 23:34 pandaJob.out
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc    989798 Nov 21 23:37 agis_schedconf.cvmfs.json
[2025-11-23 01:36:22] drwx------. 5 boinc boinc      4096 Nov 21 23:37 pilot3
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc       533 Nov 23 01:08 boinc_task_state.xml
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc 931687713 Nov 23 01:32 HITS.47493068._005787.pool.root.1
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc      1031 Nov 23 01:33 memory_monitor_summary.json
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc   1526164 Nov 23 01:34 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc   2581756 Nov 23 01:34 log.47493068._005787.job.log.tgz.1
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc        95 Nov 23 01:35 pilot_heartbeat.json
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc      8624 Nov 23 01:35 heartbeat.json
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc      8192 Nov 23 01:36 boinc_mmap_file
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc        29 Nov 23 01:36 wrapper_checkpoint.txt
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc      4883 Nov 23 01:36 pilotlog.txt
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc  12414754 Nov 23 01:36 log.47493068._005787.job.log.1
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc       353 Nov 23 01:36 output.list
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc       620 Nov 23 01:36 runtime_log
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc  15011840 Nov 23 01:36 result.tar.gz
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc       662 Nov 23 01:36 zizNDmPQff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8CGKDmZNlONn.diag
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc      8703 Nov 23 01:36 runtime_log.err
[2025-11-23 01:36:22] -rw-r--r--. 1 boinc boinc     21519 Nov 23 01:36 stderr.txt
[2025-11-23 01:36:22] HITS file was successfully produced:
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc 931687713 Nov 23 01:32 shared/HITS.pool.root.1
[2025-11-23 01:36:22]  *** Contents of shared directory: ***
[2025-11-23 01:36:22] total 1324964
[2025-11-23 01:36:22] -rw-r--r--. 2 boinc boinc 409451931 Nov 21 23:34 ATLAS.root_0
[2025-11-23 01:36:22] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:34 start_atlas.sh
[2025-11-23 01:36:22] -rw-r--r--. 2 boinc boinc    590099 Nov 21 23:34 input.tar.gz
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc 931687713 Nov 23 01:32 HITS.pool.root.1
[2025-11-23 01:36:22] -rw-------. 1 boinc boinc  15011840 Nov 23 01:36 result.tar.gz
01:36:23 (4134): run_atlas exited; CPU time 345483.764717
01:36:23 (4134): called boinc_finish(0)

</stderr_txt>
]]>

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