Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-19 21:04:52 (8732): vboxwrapper version 26210
2025-11-19 21:04:52 (8732): BOINC client version: 8.2.4
2025-11-19 21:04:53 (8732): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-11-19 21:04:53 (8732): Successfully copied 'init_data.xml' to the shared directory.
2025-11-19 21:04:53 (8732): Create VM. (boinc_4c3063049e43538c, slot#0)
2025-11-19 21:04:54 (8732): Setting Memory Size for VM. (4800MB)
2025-11-19 21:04:54 (8732): Setting CPU Count for VM. (8)
2025-11-19 21:04:54 (8732): Setting Chipset Options for VM.
2025-11-19 21:04:55 (8732): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-19 21:04:55 (8732): Setting Boot Options for VM.
2025-11-19 21:04:55 (8732): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-19 21:04:56 (8732): Enabling VM Network Access.
2025-11-19 21:04:56 (8732): Disabling USB Support for VM.
2025-11-19 21:04:56 (8732): Disabling COM Port Support for VM.
2025-11-19 21:04:56 (8732): Disabling LPT Port Support for VM.
2025-11-19 21:04:57 (8732): Disabling Audio Support for VM.
2025-11-19 21:04:57 (8732): Disabling Clipboard Support for VM.
2025-11-19 21:04:57 (8732): Disabling Drag and Drop Support for VM.
2025-11-19 21:04:58 (8732): Adding storage controller(s) to VM.
2025-11-19 21:04:58 (8732): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-19 21:04:58 (8732): Adding VirtualBox Guest Additions to VM.
2025-11-19 21:04:59 (8732): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-19 21:04:59 (8732): forwarding host port 63619 to guest port 80
2025-11-19 21:04:59 (8732): Enabling remote desktop for VM.
2025-11-19 21:04:59 (8732): Required extension pack not installed, remote desktop not enabled.
2025-11-19 21:04:59 (8732): Enabling shared directory for VM.
2025-11-19 21:05:00 (8732): Starting VM using VBoxManage interface. (boinc_4c3063049e43538c, slot#0)
2025-11-19 21:05:06 (8732): Successfully started VM. (PID = '6832')
2025-11-19 21:05:06 (8732): Reporting VM Process ID to BOINC.
2025-11-19 21:05:06 (8732): Guest Log: BIOS: VirtualBox 7.0.6
2025-11-19 21:05:06 (8732): Guest Log: CPUID EDX: 0x178bfbff
2025-11-19 21:05:06 (8732): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-19 21:05:06 (8732): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-19 21:05:06 (8732): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-19 21:05:06 (8732): Detected: Web Application Enabled (http://localhost:63619)
2025-11-19 21:05:06 (8732): Preference change detected
2025-11-19 21:05:06 (8732): Setting CPU throttle for VM. (100%)
2025-11-19 21:05:06 (8732): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-19 21:05:08 (8732): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-19 21:05:08 (8732): Guest Log: BIOS: Booting from Hard Disk...
2025-11-19 21:05:11 (8732): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-19 21:05:11 (8732): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-19 21:05:11 (8732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-19 21:05:17 (8732): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-19 21:05:17 (8732): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-19 21:05:22 (8732): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.000119 main     Log opened 2025-11-19T21:05:20.286800000Z
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.000211 main     OS Product: Linux
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.000239 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.000260 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.000281 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.000282 main     Process ID: 1370
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.000282 main     Package type: LINUX_64BITS_GENERIC
2025-11-19 21:05:22 (8732): Guest Log: 00:00:00.001171 main     5.2.32 r132073 started. Verbose level = 0
2025-11-19 21:05:22 (8732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-19 21:05:22 (8732): Guest Log: [INFO] Mounting shared directory
2025-11-19 21:05:22 (8732): Guest Log: [INFO] Checking for init_data.xml
2025-11-19 21:05:29 (8732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-19 21:05:29 (8732): Guest Log: [INFO] Detected branch: prod
2025-11-19 21:05:29 (8732): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-19 21:05:29 (8732): Guest Log: Copying input files
2025-11-19 21:05:31 (8732): Guest Log: Copied input files into RunAtlas.
2025-11-19 21:05:31 (8732): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-19 21:05:31 (8732): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-19 21:05:31 (8732): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-19 21:05:31 (8732): Guest Log: Further information can be found at the LHC@home message board.
2025-11-19 21:05:32 (8732): Guest Log: 00:00:10.014609 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 781 472 000ns (GuestNow=1 763 615 132 070 854 000 ns GuestLast=1 763 586 320 289 382 000 ns fSetTimeLastLoop=true )
2025-11-19 21:05:40 (8732): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-19 21:05:40 (8732): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-19 21:05:40 (8732): Guest Log: 2.6.3.0 1652 0 30164 153069 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-19 21:05:41 (8732): Guest Log: copied the webapp to /var/www
2025-11-19 21:05:41 (8732): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-19 21:05:41 (8732): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-19 21:05:42 (8732): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-19 21:05:42 (8732): Guest Log:  *** Starting ATLAS job. (PandaID=6891588711 taskID=47493068) ***
2025-11-19 22:45:25 (8732): Status Report: Elapsed Time: '6000.000000'
2025-11-19 22:45:25 (8732): Status Report: CPU Time: '39610.796875'
2025-11-20 00:25:49 (8732): Status Report: Elapsed Time: '12000.000000'
2025-11-20 00:25:49 (8732): Status Report: CPU Time: '86920.187500'
2025-11-20 02:06:13 (8732): Status Report: Elapsed Time: '18000.000000'
2025-11-20 02:06:13 (8732): Status Report: CPU Time: '134248.234375'
2025-11-20 03:46:36 (8732): Status Report: Elapsed Time: '24000.000000'
2025-11-20 03:46:36 (8732): Status Report: CPU Time: '181586.171875'
2025-11-20 05:27:37 (8732): Status Report: Elapsed Time: '30000.983465'
2025-11-20 05:27:37 (8732): Status Report: CPU Time: '229152.250000'
2025-11-20 07:07:56 (8732): Status Report: Elapsed Time: '36000.983465'
2025-11-20 07:07:56 (8732): Status Report: CPU Time: '276540.187500'
2025-11-20 08:48:19 (8732): Status Report: Elapsed Time: '42000.983465'
2025-11-20 08:48:19 (8732): Status Report: CPU Time: '323819.296875'
2025-11-20 09:47:12 (8732): Guest Log:  *** Job finished ***
2025-11-20 09:47:12 (8732): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:46:55,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:46:55,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:04,725 | INFO     | [monitor] cgroup control has ended
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:05,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065572083520)>', '<ExcThread(monitor, started 140064378054400)>']
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:06,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:06,730 | INFO     | [monitor] control thread has ended
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,868 | INFO     | all workflow threads have been joined
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,869 | INFO     | end of generic workflow (traces error code: 0)
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,869 | INFO     | traces error code: 0
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,969 [wrapper] ==== pilot stdout END ====
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,974 [wrapper] ==== wrapper stdout RESUME ====
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,980 [wrapper] pilotpid: 6094
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:10,984 [wrapper] Pilot exit status: 0
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:11,001 [wrapper] pandaids: 6891588711
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:11,035 [wrapper] cleanup supervisor_pilot 30350 6095
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:11,045 [wrapper] Test setup, not cleaning
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:11,049 [wrapper] apfmon messages muted
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:11,054 [wrapper] ==== wrapper stdout END ====
2025-11-20 09:47:12 (8732): Guest Log: 2025-11-20 17:47:11,058 [wrapper] ==== wrapper stderr END ====
2025-11-20 09:47:12 (8732): Guest Log:  *** Error codes and diagnostics ***
2025-11-20 09:47:12 (8732): Guest Log:     "exeErrorCode": 0,
2025-11-20 09:47:12 (8732): Guest Log:     "exeErrorDiag": "",
2025-11-20 09:47:12 (8732): Guest Log:     "pilotErrorCode": 0,
2025-11-20 09:47:12 (8732): Guest Log:     "pilotErrorDiag": "",
2025-11-20 09:47:12 (8732): Guest Log:  *** Listing of results directory ***
2025-11-20 09:47:12 (8732): Guest Log: total 915280
2025-11-20 09:47:12 (8732): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 18 17:24 pilot3.tar.gz
2025-11-20 09:47:12 (8732): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 18 17:40 queuedata.json
2025-11-20 09:47:12 (8732): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 18 17:43 runpilot2-wrapper.sh
2025-11-20 09:47:12 (8732): Guest Log: -rwxr-xr-x. 1 atlas atlas      8875 Nov 20 05:05 init_data.xml
2025-11-20 09:47:12 (8732): Guest Log: -rwxr-xr-x. 1 atlas atlas    590101 Nov 20 05:05 input.tar.gz
2025-11-20 09:47:12 (8732): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 20 05:05 start_atlas.sh
2025-11-20 09:47:12 (8732): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 20 05:05 EVNT.47493065._000520.pool.root.1 -> /data/./ATLAS.root_0
2025-11-20 09:47:12 (8732): Guest Log: -rw-r--r--. 1 atlas atlas      2773 Nov 20 05:05 pandaJob.out
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas    989427 Nov 20 05:07 agis_schedconf.cvmfs.json
2025-11-20 09:47:12 (8732): Guest Log: drwx------. 5 atlas atlas      4096 Nov 20 05:08 pilot3
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas 917582836 Nov 20 17:45 HITS.47493068._005195.pool.root.1
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas      1044 Nov 20 17:45 memory_monitor_summary.json
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 20 17:46 agis_ddmendpoints.agis.ALL.json
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas   1974228 Nov 20 17:46 log.47493068._005195.job.log.tgz.1
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas        95 Nov 20 17:46 pilot_heartbeat.json
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas      8669 Nov 20 17:46 heartbeat.json
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 20 17:47 pilotlog.txt
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas   5932903 Nov 20 17:47 log.47493068._005195.job.log.1
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas       353 Nov 20 17:47 output.list
2025-11-20 09:47:12 (8732): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 20 17:47 runtime_log
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas   7925760 Nov 20 17:47 result.tar.gz
2025-11-20 09:47:12 (8732): Guest Log: -rw-r--r--. 1 atlas atlas      8652 Nov 20 17:47 runtime_log.err
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas       668 Nov 20 17:47 roOODmhuef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmM7FKDmYlSDbn.diag
2025-11-20 09:47:12 (8732): Guest Log: Looking for outputfile HITS.47493068._005195.pool.root.1
2025-11-20 09:47:12 (8732): Guest Log: HITS file was successfully produced
2025-11-20 09:47:12 (8732): Guest Log: -rw-------. 1 atlas atlas 917582836 Nov 20 17:45 /home/atlas/RunAtlas/HITS.47493068._005195.pool.root.1
2025-11-20 09:47:16 (8732): Guest Log: Successfully finished the ATLAS job!
2025-11-20 09:47:16 (8732): Guest Log: Copying the results back to the shared directory!
2025-11-20 09:47:16 (8732): Guest Log:  *** Contents of shared directory: ***
2025-11-20 09:47:16 (8732): Guest Log: total 1305016
2025-11-20 09:47:16 (8732): Guest Log: -rwxrwxrwx. 1 root root 410199922 Nov 20 05:04 ATLAS.root_0
2025-11-20 09:47:16 (8732): Guest Log: -rwxrwxrwx. 1 root root 917582836 Nov 20 17:47 HITS.pool.root.1
2025-11-20 09:47:16 (8732): Guest Log: -rwxrwxrwx. 1 root root      8875 Nov 20 05:04 init_data.xml
2025-11-20 09:47:16 (8732): Guest Log: -rwxrwxrwx. 1 root root    590101 Nov 18 22:58 input.tar.gz
2025-11-20 09:47:16 (8732): Guest Log: -rwxrwxrwx. 1 root root   7925760 Nov 20  2025 result.tar.gz
2025-11-20 09:47:16 (8732): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 18 22:58 start_atlas.sh
2025-11-20 09:47:16 (8732): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-20 09:47:16 (8732): VM Completion File Detected.
2025-11-20 09:47:16 (8732): Powering off VM.
2025-11-20 09:47:17 (8732): Successfully stopped VM.
2025-11-20 09:47:17 (8732): Deregistering VM. (boinc_4c3063049e43538c, slot#0)
2025-11-20 09:47:17 (8732): Removing network bandwidth throttle group from VM.
2025-11-20 09:47:17 (8732): Removing VM from VirtualBox.
2025-11-20 09:47:23 (8732): called boinc_finish(0)

</stderr_txt>
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