Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:20:13 (18488): wrapper (7.7.26015): starting
21:20:13 (18488): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:20:13] Arguments: --nthreads 8
[2025-11-21 21:20:13] Threads: 8
[2025-11-21 21:20:13] Checking for CVMFS
[2025-11-21 21:20:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:20:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:20:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:20:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:20:15] 2.11.2.0 30743 74968 88240 153142 0 220 14067723 25165824 4358 130560 2 21546488 99.858 12829428 2042 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 21:20:15] CVMFS is ok
[2025-11-21 21:20:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:20:15] Checking for apptainer binary...
[2025-11-21 21:20:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:20:15] Running /usr/bin/apptainer --version
[2025-11-21 21:20:15] apptainer version 1.3.2-1.el7
[2025-11-21 21:20:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:20:18] cg-vwn349.simple-grid.lan
[2025-11-21 21:20:18] apptainer works
[2025-11-21 21:20:18] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:20:18] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:20:19] Starting ATLAS job with PandaID=6891572810
[2025-11-21 21:20:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:18:08]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:18:08] 2025-11-22 22:16:53,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:18:08] 2025-11-22 22:16:54,136 | INFO     | time since job start (93220s) is within the limit (172800.0s)
[2025-11-22 23:18:08] 2025-11-22 22:16:54,637 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 23:18:08] 2025-11-22 22:16:54,638 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 23:18:08] 2025-11-22 22:16:54,640 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891572810/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:18:08] 2025-11-22 22:16:54,641 | INFO     | extracted standard info from prmon json
[2025-11-22 23:18:08] 2025-11-22 22:16:54,641 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:18:08] 2025-11-22 22:16:54,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:18:08] 2025-11-22 22:16:54,670 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:18:08] 2025-11-22 22:16:54,673 | INFO     | sum of square deviations: 1084660909169.3751
[2025-11-22 23:18:08] 2025-11-22 22:16:54,735 | INFO     | sum of deviations: 4436943398762.688
[2025-11-22 23:18:08] 2025-11-22 22:16:54,736 | INFO     | mean x: 1763803387.842556
[2025-11-22 23:18:08] 2025-11-22 22:16:54,736 | INFO     | mean y: 2862078.4380764165
[2025-11-22 23:18:08] 2025-11-22 22:16:54,736 | INFO     | intersect: -7212200004.325011
[2025-11-22 23:18:08] 2025-11-22 22:16:54,738 | INFO     | chi2: 13.391807868146506
[2025-11-22 23:18:08] 2025-11-22 22:16:54,740 | INFO     | sum of square deviations: 1073978809522.8292
[2025-11-22 23:18:08] 2025-11-22 22:16:54,799 | INFO     | sum of deviations: 4957986410570.092
[2025-11-22 23:18:08] 2025-11-22 22:16:54,800 | INFO     | mean x: 1763803235.3469927
[2025-11-22 23:18:08] 2025-11-22 22:16:54,800 | INFO     | mean y: 2869516.108393919
[2025-11-22 23:18:08] 2025-11-22 22:16:54,800 | INFO     | intersect: -8139667742.755525
[2025-11-22 23:18:08] 2025-11-22 22:16:54,802 | INFO     | chi2: 10.145955420994373
[2025-11-22 23:18:08] 2025-11-22 22:16:54,802 | INFO     | current chi2=10.145955420994373 (change=24.23759718710313 %)
[2025-11-22 23:18:08] 2025-11-22 22:16:54,802 | INFO     | right removable region: 1512
[2025-11-22 23:18:08] 2025-11-22 22:16:54,804 | INFO     | sum of square deviations: 1073977566342.8291
[2025-11-22 23:18:08] 2025-11-22 22:16:54,873 | INFO     | sum of deviations: 3795672247166.0845
[2025-11-22 23:18:08] 2025-11-22 22:16:54,873 | INFO     | mean x: 1763803540.3469927
[2025-11-22 23:18:08] 2025-11-22 22:16:54,873 | INFO     | mean y: 2871232.028420357
[2025-11-22 23:18:08] 2025-11-22 22:16:54,873 | INFO     | intersect: -6230797288.950055
[2025-11-22 23:18:08] 2025-11-22 22:16:54,875 | INFO     | chi2: 8.665353930392845
[2025-11-22 23:18:08] 2025-11-22 22:16:54,876 | INFO     | current chi2=8.665353930392845 (change=35.29362117713705 %)
[2025-11-22 23:18:08] 2025-11-22 22:16:54,878 | INFO     | sum of square deviations: 1063364596928.7262
[2025-11-22 23:18:08] 2025-11-22 22:16:54,955 | INFO     | sum of deviations: 3287011740187.3096
[2025-11-22 23:18:08] 2025-11-22 22:16:54,956 | INFO     | mean x: 1763803692.8514588
[2025-11-22 23:18:08] 2025-11-22 22:16:54,956 | INFO     | mean y: 2878539.269230769
[2025-11-22 23:18:08] 2025-11-22 22:16:54,956 | INFO     | intersect: -5449290418.145356
[2025-11-22 23:18:08] 2025-11-22 22:16:54,958 | INFO     | chi2: 5.74156684404777
[2025-11-22 23:18:08] 2025-11-22 22:16:54,958 | INFO     | current chi2=5.74156684404777 (change=33.741115594715524 %)
[2025-11-22 23:18:08] 2025-11-22 22:16:54,960 | INFO     | sum of square deviations: 1052822319932.8108
[2025-11-22 23:18:08] 2025-11-22 22:16:55,027 | INFO     | sum of deviations: 3134594835041.804
[2025-11-22 23:18:08] 2025-11-22 22:16:55,028 | INFO     | mean x: 1763803845.3519628
[2025-11-22 23:18:08] 2025-11-22 22:16:55,028 | INFO     | mean y: 2880742.3047238854
[2025-11-22 23:18:08] 2025-11-22 22:16:55,028 | INFO     | intersect: -5248537582.508122
[2025-11-22 23:18:08] 2025-11-22 22:16:55,030 | INFO     | chi2: 5.4764535126339675
[2025-11-22 23:18:08] 2025-11-22 22:16:55,030 | INFO     | current chi2=5.4764535126339675 (change=4.617438734317673 %)
[2025-11-22 23:18:08] 2025-11-22 22:16:55,030 | INFO     | left removable region: 30
[2025-11-22 23:18:08] 2025-11-22 22:16:55,032 | INFO     | sum of square deviations: 1009306726585.0986
[2025-11-22 23:18:08] 2025-11-22 22:16:55,109 | INFO     | sum of deviations: 3489740504476.1943
[2025-11-22 23:18:08] 2025-11-22 22:16:55,110 | INFO     | mean x: 1763804119.8556006
[2025-11-22 23:18:08] 2025-11-22 22:16:55,110 | INFO     | mean y: 2893693.4588394063
[2025-11-22 23:18:08] 2025-11-22 22:16:55,110 | INFO     | intersect: -6095568267.502938
[2025-11-22 23:18:08] 2025-11-22 22:16:55,112 | INFO     | chi2: 1.4734668576386796
[2025-11-22 23:18:08] 2025-11-22 22:16:55,112 | INFO     | current memory leak: 3.46 B/s (using 1482 data points, chi2=1.47)
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | ..............................
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | . Timing measurements:
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | . get job = 0 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | . initial setup = 8 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | . payload setup = 158 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | . stage-in = 0 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,115 | INFO     | . payload execution = 92754 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,116 | INFO     | . stage-out = 6 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,116 | INFO     | . log creation = 2 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,116 | INFO     | ..............................
[2025-11-22 23:18:08] 2025-11-22 22:16:55,249 | INFO     | 
[2025-11-22 23:18:08] 2025-11-22 22:16:55,249 | INFO     | job summary report
[2025-11-22 23:18:08] 2025-11-22 22:16:55,249 | INFO     | --------------------------------------------------
[2025-11-22 23:18:08] 2025-11-22 22:16:55,249 | INFO     | PanDA job id: 6891572810
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | task id: 47493068
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | errors: (none)
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | pilot state: finished 
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | transexitcode: 0
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | exeerrorcode: 0
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | exeerrordiag: 
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | exitcode: 0
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | exitmsg: OK
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | cpuconsumptiontime: 343177 s
[2025-11-22 23:18:08] 2025-11-22 22:16:55,250 | INFO     | nevents: 1000
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | neventsw: 0
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | pid: 28811
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | pgrp: 28811
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | corecount: 8
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | event service: False
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | sizes: {0: 2298626, 1: 2298825, 12: 2298825, 23: 2298853, 34: 2298881, 44: 2298909, 55: 2299065, 66: 2299093, 77: 2299121, 88: 2299177, 94: 2299467, 98: 2299775, 9
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | --------------------------------------------------
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | 
[2025-11-22 23:18:08] 2025-11-22 22:16:55,251 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-22 23:18:08] 2025-11-22 22:16:55,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:18:08] 2025-11-22 22:16:55,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:18:08] 2025-11-22 22:16:55,548 | INFO     | job 6891572810 has completed (purged errors)
[2025-11-22 23:18:08] 2025-11-22 22:16:55,549 | INFO     | overall cleanup function is called
[2025-11-22 23:18:08] 2025-11-22 22:16:56,570 | INFO     | --- collectZombieJob: --- 10, [28811]
[2025-11-22 23:18:08] 2025-11-22 22:16:56,570 | INFO     | zombie collector waiting for pid 28811
[2025-11-22 23:18:08] 2025-11-22 22:16:56,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:18:08] 2025-11-22 22:16:56,570 | INFO     | collected zombie processes
[2025-11-22 23:18:08] 2025-11-22 22:16:56,570 | INFO     | will attempt to kill all subprocesses of pid=28811
[2025-11-22 23:18:08] 2025-11-22 22:16:56,695 | INFO     | process IDs to be killed: [28811] (in reverse order)
[2025-11-22 23:18:08] 2025-11-22 22:16:57,705 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:18:08] 2025-11-22 22:16:57,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:18:08] 2025-11-22 22:16:57,709 | INFO     | did not find any defunct processes belonging to 28811
[2025-11-22 23:18:08] 2025-11-22 22:16:57,712 | INFO     | did not find any defunct processes belonging to 28811
[2025-11-22 23:18:08] 2025-11-22 22:16:57,749 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:18:08] 2025-11-22 22:16:57,749 | INFO     | ready for new job
[2025-11-22 23:18:08] 2025-11-22 22:16:57,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:18:08] 2025-11-22 22:16:57,757 | INFO     | ***************************************
[2025-11-22 23:18:08] 2025-11-22 22:16:57,757 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:18:08] 2025-11-22 22:16:57,757 | INFO     | ***************************************
[2025-11-22 23:18:08] 2025-11-22 22:16:57,757 | INFO     | 
[2025-11-22 23:18:08] 2025-11-22 22:16:57,758 | INFO     | pilot is running in a VM
[2025-11-22 23:18:08] 2025-11-22 22:16:57,758 | INFO     | architecture information:
[2025-11-22 23:18:08] 2025-11-22 22:16:57,760 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:18:08] 2025-11-22 22:16:57,987 | INFO     | cat /etc/os-release:
[2025-11-22 23:18:08] NAME="CentOS Linux"
[2025-11-22 23:18:08] VERSION="7 (Core)"
[2025-11-22 23:18:08] ID="centos"
[2025-11-22 23:18:08] ID_LIKE="rhel fedora"
[2025-11-22 23:18:08] VERSION_ID="7"
[2025-11-22 23:18:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:18:08] ANSI_COLOR="0;31"
[2025-11-22 23:18:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:18:08] HOME_URL="https://www.centos.org/"
[2025-11-22 23:18:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:18:08] 
[2025-11-22 23:18:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:18:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:18:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:18:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:18:08] 
[2025-11-22 23:18:08] 2025-11-22 22:16:57,988 | INFO     | ***************************************
[2025-11-22 23:18:08] 2025-11-22 22:16:58,492 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-22 23:18:08] 2025-11-22 22:16:58,714 | INFO     | sufficient remaining disk space (495028535296 B)
[2025-11-22 23:18:08] 2025-11-22 22:16:58,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:18:08] 2025-11-22 22:16:58,714 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:18:08] 2025-11-22 22:16:58,715 | INFO     | update_server=False
[2025-11-22 23:18:08] 2025-11-22 22:16:58,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:18:08] 2025-11-22 22:16:58,992 | INFO     | all data control threads have been joined
[2025-11-22 23:18:08] 2025-11-22 22:16:59,129 | INFO     | all payload control threads have been joined
[2025-11-22 23:18:08] 2025-11-22 22:16:59,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:18:08] 2025-11-22 22:16:59,287 | INFO     | aborting loop
[2025-11-22 23:18:08] 2025-11-22 22:16:59,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:18:08] 2025-11-22 22:16:59,721 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:16:59,809 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:16:59,913 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:16:59,998 | INFO     | [data] control thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:00,100 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:00,135 | INFO     | [payload] control thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:00,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:18:08] 2025-11-22 22:17:00,293 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:00,378 | INFO     | all job control threads have been joined
[2025-11-22 23:18:08] 2025-11-22 22:17:00,445 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:00,470 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:00,538 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:00,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:01,117 | INFO     | [job] validate thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:01,269 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:01,384 | INFO     | [job] control thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:01,567 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:01,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:18:08] 2025-11-22 22:17:05,722 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:18:08] 2025-11-22 22:17:27,382 | INFO     | PID=22276 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:18:08] 2025-11-22 22:17:27,382 | INFO     | .. there are 9 such processes running
[2025-11-22 23:18:08] 2025-11-22 22:17:27,394 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:18:08] 2025-11-22 22:17:27,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:18:08] 2025-11-22 22:17:27,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:18:08] 2025-11-22 22:17:57,182 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:18:08] 2025-11-22 22:17:59,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969864795968)>', '<ExcThread(monitor, started 139969293186816)>']
[2025-11-22 23:18:08] 2025-11-22 22:17:59,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:18:08] 2025-11-22 22:17:59,585 | INFO     | [monitor] control thread has ended
[2025-11-22 23:18:08] 2025-11-22 22:18:04,297 | INFO     | all workflow threads have been joined
[2025-11-22 23:18:08] 2025-11-22 22:18:04,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:18:08] 2025-11-22 22:18:04,297 | INFO     | traces error code: 0
[2025-11-22 23:18:08] 2025-11-22 22:18:04,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:18:08] 2025-11-22 22:18:04,760 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:18:08] 2025-11-22 22:18:04,864 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:18:08] 2025-11-22 22:18:04,943 [wrapper] pilotpid: 22276
[2025-11-22 23:18:08] 2025-11-22 22:18:05,044 [wrapper] Pilot exit status: 0
[2025-11-22 23:18:08] 2025-11-22 22:18:05,454 [wrapper] pandaids: 6891572810
[2025-11-22 23:18:08] 2025-11-22 22:18:06,584 [wrapper] cleanup supervisor_pilot  5693 22277
[2025-11-22 23:18:08] 2025-11-22 22:18:06,702 [wrapper] Test setup, not cleaning
[2025-11-22 23:18:08] 2025-11-22 22:18:06,797 [wrapper] apfmon messages muted
[2025-11-22 23:18:08] 2025-11-22 22:18:06,905 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:18:08] 2025-11-22 22:18:06,963 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:18:08]  *** Error codes and diagnostics ***
[2025-11-22 23:18:08]     "exeErrorCode": 0,
[2025-11-22 23:18:08]     "exeErrorDiag": "",
[2025-11-22 23:18:08]     "pilotErrorCode": 0,
[2025-11-22 23:18:08]     "pilotErrorDiag": "",
[2025-11-22 23:18:08]  *** Listing of results directory ***
[2025-11-22 23:18:08] total 1344880
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:24 pilot3.tar.gz
[2025-11-22 23:18:08] -rwx------. 1 boinc boinc     36292 Nov 18 17:30 runpilot2-wrapper.sh
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:30 queuedata.json
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc       100 Nov 21 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:18:08] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 21:20 run_atlas
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc       105 Nov 21 21:20 job.xml
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc      6392 Nov 21 21:20 init_data.xml
[2025-11-22 23:18:08] -rw-r--r--. 2 boinc boinc 411591589 Nov 21 21:20 EVNT.47493065._000356.pool.root.1
[2025-11-22 23:18:08] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:20 start_atlas.sh
[2025-11-22 23:18:08] drwxrwx--x. 2 boinc boinc        68 Nov 21 21:20 shared
[2025-11-22 23:18:08] -rw-r--r--. 2 boinc boinc    590097 Nov 21 21:20 input.tar.gz
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc         0 Nov 21 21:20 boinc_lockfile
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc      2773 Nov 21 21:20 pandaJob.out
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc    989798 Nov 21 21:23 agis_schedconf.cvmfs.json
[2025-11-22 23:18:08] drwx------. 5 boinc boinc      4096 Nov 21 21:23 pilot3
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc       533 Nov 22 22:54 boinc_task_state.xml
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc 931683760 Nov 22 23:13 HITS.47493068._003555.pool.root.1
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc      1031 Nov 22 23:15 memory_monitor_summary.json
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc   1526164 Nov 22 23:15 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc   2584768 Nov 22 23:15 log.47493068._003555.job.log.tgz.1
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc      8629 Nov 22 23:16 heartbeat.json
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc        95 Nov 22 23:17 pilot_heartbeat.json
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc        29 Nov 22 23:17 wrapper_checkpoint.txt
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc      8192 Nov 22 23:17 boinc_mmap_file
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc      4885 Nov 22 23:18 pilotlog.txt
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc  12399072 Nov 22 23:18 log.47493068._003555.job.log.1
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc       353 Nov 22 23:18 output.list
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc       620 Nov 22 23:18 runtime_log
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc  15001600 Nov 22 23:18 result.tar.gz
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc       662 Nov 22 23:18 vHrLDmimdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFpFKDmtua9Fo.diag
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc      8717 Nov 22 23:18 runtime_log.err
[2025-11-22 23:18:08] -rw-r--r--. 1 boinc boinc     21016 Nov 22 23:18 stderr.txt
[2025-11-22 23:18:08] HITS file was successfully produced:
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc 931683760 Nov 22 23:13 shared/HITS.pool.root.1
[2025-11-22 23:18:08]  *** Contents of shared directory: ***
[2025-11-22 23:18:08] total 1327044
[2025-11-22 23:18:08] -rw-r--r--. 2 boinc boinc 411591589 Nov 21 21:20 ATLAS.root_0
[2025-11-22 23:18:08] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:20 start_atlas.sh
[2025-11-22 23:18:08] -rw-r--r--. 2 boinc boinc    590097 Nov 21 21:20 input.tar.gz
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc 931683760 Nov 22 23:13 HITS.pool.root.1
[2025-11-22 23:18:08] -rw-------. 1 boinc boinc  15001600 Nov 22 23:18 result.tar.gz
23:18:10 (18488): run_atlas exited; CPU time 343728.881167
23:18:10 (18488): called boinc_finish(0)

</stderr_txt>
]]>

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