Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:37:23 (32221): wrapper (7.7.26015): starting
22:37:23 (32221): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:37:23] Arguments: --nthreads 8
[2025-11-21 22:37:23] Threads: 8
[2025-11-21 22:37:23] Checking for CVMFS
[2025-11-21 22:37:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:37:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:37:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:37:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:37:27] 2.11.2.0 32728 278545 144188 153143 3 128 17663724 25165824 4296 130560 2 137544916 99.888 74698109 3107 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 22:37:27] CVMFS is ok
[2025-11-21 22:37:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:37:27] Checking for apptainer binary...
[2025-11-21 22:37:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:37:27] Running /usr/bin/apptainer --version
[2025-11-21 22:37:27] apptainer version 1.3.2-1.el7
[2025-11-21 22:37:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:37:58] cg-vwn337.simple-grid.lan
[2025-11-21 22:37:58] apptainer works
[2025-11-21 22:37:58] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:37:58] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:37:58] Starting ATLAS job with PandaID=6891589879
[2025-11-21 22:37:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:39:30]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:39:30] 2025-11-22 23:38:49,254 | INFO     | sum of deviations: 3889939639117.951
[2025-11-23 00:39:30] 2025-11-22 23:38:49,254 | INFO     | mean x: 1763807969.4512753
[2025-11-23 00:39:30] 2025-11-22 23:38:49,255 | INFO     | mean y: 2874463.334859385
[2025-11-23 00:39:30] 2025-11-22 23:38:49,255 | INFO     | intersect: -6187160987.541438
[2025-11-23 00:39:30] 2025-11-22 23:38:49,257 | INFO     | chi2: 8.991120595598039
[2025-11-23 00:39:30] 2025-11-22 23:38:49,259 | INFO     | sum of square deviations: 1097573824638.0547
[2025-11-23 00:39:30] 2025-11-22 23:38:49,302 | INFO     | time since job start (93432s) is within the limit (172800.0s)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,339 | INFO     | sum of deviations: 4370810317717.6904
[2025-11-23 00:39:30] 2025-11-22 23:38:49,340 | INFO     | mean x: 1763807816.9560368
[2025-11-23 00:39:30] 2025-11-22 23:38:49,340 | INFO     | mean y: 2881230.05511811
[2025-11-23 00:39:30] 2025-11-22 23:38:49,340 | INFO     | intersect: -7021037554.965867
[2025-11-23 00:39:30] 2025-11-22 23:38:49,342 | INFO     | chi2: 6.221246599271221
[2025-11-23 00:39:30] 2025-11-22 23:38:49,342 | INFO     | current chi2=6.221246599271221 (change=30.806771713004494 %)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,344 | INFO     | sum of square deviations: 1086807025117.42
[2025-11-23 00:39:30] 2025-11-22 23:38:49,417 | INFO     | sum of deviations: 4804215781559.02
[2025-11-23 00:39:30] 2025-11-22 23:38:49,417 | INFO     | mean x: 1763807664.4608295
[2025-11-23 00:39:30] 2025-11-22 23:38:49,417 | INFO     | mean y: 2887365.655694536
[2025-11-23 00:39:30] 2025-11-22 23:38:49,417 | INFO     | intersect: -7794000601.940909
[2025-11-23 00:39:30] 2025-11-22 23:38:49,419 | INFO     | chi2: 3.7605939039373952
[2025-11-23 00:39:30] 2025-11-22 23:38:49,420 | INFO     | current chi2=3.7605939039373952 (change=39.552405712740516 %)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,422 | INFO     | sum of square deviations: 1076110508183.9287
[2025-11-23 00:39:30] 2025-11-22 23:38:49,503 | INFO     | sum of deviations: 4915411240207.181
[2025-11-23 00:39:30] 2025-11-22 23:38:49,503 | INFO     | mean x: 1763807511.963012
[2025-11-23 00:39:30] 2025-11-22 23:38:49,503 | INFO     | mean y: 2888947.645970938
[2025-11-23 00:39:30] 2025-11-22 23:38:49,503 | INFO     | intersect: -8053755053.067571
[2025-11-23 00:39:30] 2025-11-22 23:38:49,505 | INFO     | chi2: 3.344528376523496
[2025-11-23 00:39:30] 2025-11-22 23:38:49,505 | INFO     | current chi2=3.344528376523496 (change=11.063824971323621 %)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,505 | INFO     | right removable region: 1513
[2025-11-23 00:39:30] 2025-11-22 23:38:49,508 | INFO     | sum of square deviations: 1097572471048.0553
[2025-11-23 00:39:30] 2025-11-22 23:38:49,578 | INFO     | sum of deviations: 3390316017084.4253
[2025-11-23 00:39:30] 2025-11-22 23:38:49,579 | INFO     | mean x: 1763808121.9560368
[2025-11-23 00:39:30] 2025-11-22 23:38:49,580 | INFO     | mean y: 2881490.1108923885
[2025-11-23 00:39:30] 2025-11-22 23:38:49,580 | INFO     | intersect: -5445384646.904249
[2025-11-23 00:39:30] 2025-11-22 23:38:49,582 | INFO     | chi2: 6.1836680553051
[2025-11-23 00:39:30] 2025-11-22 23:38:49,582 | INFO     | current chi2=6.1836680553051 (change=31.22472344178588 %)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,584 | INFO     | sum of square deviations: 1086805154866.6597
[2025-11-23 00:39:30] 2025-11-22 23:38:49,650 | INFO     | sum of deviations: 3254707662923.0605
[2025-11-23 00:39:30] 2025-11-22 23:38:49,650 | INFO     | mean x: 1763808274.4549046
[2025-11-23 00:39:30] 2025-11-22 23:38:49,650 | INFO     | mean y: 2883410.5483870967
[2025-11-23 00:39:30] 2025-11-22 23:38:49,651 | INFO     | intersect: -5279278052.423145
[2025-11-23 00:39:30] 2025-11-22 23:38:49,652 | INFO     | chi2: 6.064317804144273
[2025-11-23 00:39:30] 2025-11-22 23:38:49,652 | INFO     | current chi2=6.064317804144273 (change=1.9300882598061515 %)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,653 | INFO     | left removable region: 20
[2025-11-23 00:39:30] 2025-11-22 23:38:49,655 | INFO     | sum of square deviations: 1031949493417.6073
[2025-11-23 00:39:30] 2025-11-22 23:38:49,733 | INFO     | sum of deviations: 4063858731917.2856
[2025-11-23 00:39:30] 2025-11-22 23:38:49,734 | INFO     | mean x: 1763808091.4668453
[2025-11-23 00:39:30] 2025-11-22 23:38:49,734 | INFO     | mean y: 2901061.1975887474
[2025-11-23 00:39:30] 2025-11-22 23:38:49,734 | INFO     | intersect: -6943046351.592335
[2025-11-23 00:39:30] 2025-11-22 23:38:49,736 | INFO     | chi2: 0.2891467565373797
[2025-11-23 00:39:30] 2025-11-22 23:38:49,736 | INFO     | current memory leak: 3.94 B/s (using 1493 data points, chi2=0.29)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,739 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,739 | INFO     | ..............................
[2025-11-23 00:39:30] 2025-11-22 23:38:49,739 | INFO     | . Timing measurements:
[2025-11-23 00:39:30] 2025-11-22 23:38:49,739 | INFO     | . get job = 0 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,739 | INFO     | . initial setup = 9 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,739 | INFO     | . payload setup = 13 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,739 | INFO     | . stage-in = 0 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,740 | INFO     | . payload execution = 93273 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,740 | INFO     | . stage-out = 5 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,740 | INFO     | . log creation = 1 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,740 | INFO     | ..............................
[2025-11-23 00:39:30] 2025-11-22 23:38:49,867 | INFO     | 
[2025-11-23 00:39:30] 2025-11-22 23:38:49,867 | INFO     | job summary report
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | --------------------------------------------------
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | PanDA job id: 6891589879
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | task id: 47493068
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | errors: (none)
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | pilot state: finished 
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | transexitcode: 0
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | exeerrorcode: 0
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | exeerrordiag: 
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | exitcode: 0
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | exitmsg: OK
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | cpuconsumptiontime: 344683 s
[2025-11-23 00:39:30] 2025-11-22 23:38:49,868 | INFO     | nevents: 1000
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | neventsw: 0
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | pid: 10225
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | pgrp: 10225
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | corecount: 8
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | event service: False
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | sizes: {0: 2297968, 1: 2298653, 2: 2298852, 13: 2298852, 17: 2299170, 23: 2299198, 93288: 2362679, 93294: 2371701, 93296: 2371757, 93400: 2372003}
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | --------------------------------------------------
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | 
[2025-11-23 00:39:30] 2025-11-22 23:38:49,869 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-23 00:39:30] 2025-11-22 23:38:50,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:39:30] 2025-11-22 23:38:50,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:39:30] 2025-11-22 23:38:50,415 | INFO     | job 6891589879 has completed (purged errors)
[2025-11-23 00:39:30] 2025-11-22 23:38:50,415 | INFO     | overall cleanup function is called
[2025-11-23 00:39:30] 2025-11-22 23:38:50,551 | INFO     | PID=3648 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 00:39:30] 2025-11-22 23:38:50,551 | INFO     | .. there are 9 such processes running
[2025-11-23 00:39:30] 2025-11-22 23:38:51,492 | INFO     | --- collectZombieJob: --- 10, [10225]
[2025-11-23 00:39:30] 2025-11-22 23:38:51,492 | INFO     | zombie collector waiting for pid 10225
[2025-11-23 00:39:30] 2025-11-22 23:38:51,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:39:30] 2025-11-22 23:38:51,492 | INFO     | collected zombie processes
[2025-11-23 00:39:30] 2025-11-22 23:38:51,492 | INFO     | will attempt to kill all subprocesses of pid=10225
[2025-11-23 00:39:30] 2025-11-22 23:38:51,649 | INFO     | process IDs to be killed: [10225] (in reverse order)
[2025-11-23 00:39:30] 2025-11-22 23:38:52,596 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:39:30] 2025-11-22 23:38:52,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:39:30] 2025-11-22 23:38:52,600 | INFO     | did not find any defunct processes belonging to 10225
[2025-11-23 00:39:30] 2025-11-22 23:38:52,604 | INFO     | did not find any defunct processes belonging to 10225
[2025-11-23 00:39:30] 2025-11-22 23:38:52,642 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:39:30] 2025-11-22 23:38:52,642 | INFO     | ready for new job
[2025-11-23 00:39:30] 2025-11-22 23:38:52,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:39:30] 2025-11-22 23:38:52,650 | INFO     | ***************************************
[2025-11-23 00:39:30] 2025-11-22 23:38:52,650 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:39:30] 2025-11-22 23:38:52,650 | INFO     | ***************************************
[2025-11-23 00:39:30] 2025-11-22 23:38:52,650 | INFO     | 
[2025-11-23 00:39:30] 2025-11-22 23:38:52,651 | INFO     | pilot is running in a VM
[2025-11-23 00:39:30] 2025-11-22 23:38:52,651 | INFO     | architecture information:
[2025-11-23 00:39:30] 2025-11-22 23:38:52,658 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:39:30] 2025-11-22 23:38:52,882 | INFO     | cat /etc/os-release:
[2025-11-23 00:39:30] NAME="CentOS Linux"
[2025-11-23 00:39:30] VERSION="7 (Core)"
[2025-11-23 00:39:30] ID="centos"
[2025-11-23 00:39:30] ID_LIKE="rhel fedora"
[2025-11-23 00:39:30] VERSION_ID="7"
[2025-11-23 00:39:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:39:30] ANSI_COLOR="0;31"
[2025-11-23 00:39:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:39:30] HOME_URL="https://www.centos.org/"
[2025-11-23 00:39:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:39:30] 
[2025-11-23 00:39:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:39:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:39:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:39:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:39:30] 
[2025-11-23 00:39:30] 2025-11-22 23:38:52,882 | INFO     | ***************************************
[2025-11-23 00:39:30] 2025-11-22 23:38:53,386 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-23 00:39:30] 2025-11-22 23:38:53,616 | INFO     | sufficient remaining disk space (492893634560 B)
[2025-11-23 00:39:30] 2025-11-22 23:38:53,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:39:30] 2025-11-22 23:38:53,617 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:39:30] 2025-11-22 23:38:53,617 | INFO     | update_server=False
[2025-11-23 00:39:30] 2025-11-22 23:38:53,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:39:30] 2025-11-22 23:38:53,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:39:30] 2025-11-22 23:38:53,714 | INFO     | aborting loop
[2025-11-23 00:39:30] 2025-11-22 23:38:53,768 | INFO     | all job control threads have been joined
[2025-11-23 00:39:30] 2025-11-22 23:38:54,101 | INFO     | all data control threads have been joined
[2025-11-23 00:39:30] 2025-11-22 23:38:54,520 | INFO     | all payload control threads have been joined
[2025-11-23 00:39:30] 2025-11-22 23:38:54,624 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:54,627 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:54,720 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:54,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:54,775 | INFO     | [job] control thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:54,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:39:30] 2025-11-22 23:38:55,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:39:30] 2025-11-22 23:38:55,046 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:55,108 | INFO     | [data] control thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:55,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:39:30] 2025-11-22 23:38:55,527 | INFO     | [payload] control thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:55,737 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:55,888 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:55,950 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:56,019 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:56,061 | INFO     | [job] validate thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:56,081 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:57,053 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:38:59,315 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:39:30] 2025-11-22 23:39:19,398 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:39:30] 2025-11-22 23:39:20,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686102591296)>', '<ExcThread(monitor, started 140685009221376)>']
[2025-11-23 00:39:30] 2025-11-22 23:39:22,745 | INFO     | PID=3648 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 00:39:30] 2025-11-22 23:39:22,745 | INFO     | .. there are 9 such processes running
[2025-11-23 00:39:30] 2025-11-22 23:39:22,747 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:39:30] 2025-11-22 23:39:22,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:39:30] 2025-11-22 23:39:22,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:39:30] 2025-11-22 23:39:22,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:39:30] 2025-11-22 23:39:22,748 | INFO     | [monitor] control thread has ended
[2025-11-23 00:39:30] 2025-11-22 23:39:26,014 | INFO     | all workflow threads have been joined
[2025-11-23 00:39:30] 2025-11-22 23:39:26,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:39:30] 2025-11-22 23:39:26,014 | INFO     | traces error code: 0
[2025-11-23 00:39:30] 2025-11-22 23:39:26,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:39:30] 2025-11-22 23:39:26,387 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:39:30] 2025-11-22 23:39:26,471 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:39:30] 2025-11-22 23:39:26,542 [wrapper] pilotpid: 3648
[2025-11-23 00:39:30] 2025-11-22 23:39:26,636 [wrapper] Pilot exit status: 0
[2025-11-23 00:39:30] 2025-11-22 23:39:26,944 [wrapper] pandaids: 6891589879
[2025-11-23 00:39:30] 2025-11-22 23:39:27,760 [wrapper] cleanup supervisor_pilot 16444 3649
[2025-11-23 00:39:30] 2025-11-22 23:39:27,802 [wrapper] Test setup, not cleaning
[2025-11-23 00:39:30] 2025-11-22 23:39:27,892 [wrapper] apfmon messages muted
[2025-11-23 00:39:30] 2025-11-22 23:39:27,946 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:39:30] 2025-11-22 23:39:28,025 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:39:30]  *** Error codes and diagnostics ***
[2025-11-23 00:39:30]     "exeErrorCode": 0,
[2025-11-23 00:39:30]     "exeErrorDiag": "",
[2025-11-23 00:39:30]     "pilotErrorCode": 0,
[2025-11-23 00:39:30]     "pilotErrorDiag": "",
[2025-11-23 00:39:30]  *** Listing of results directory ***
[2025-11-23 00:39:30] total 1347544
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:46 pilot3.tar.gz
[2025-11-23 00:39:30] -rwx------. 1 boinc boinc     36292 Nov 18 18:59 runpilot2-wrapper.sh
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:59 queuedata.json
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc       100 Nov 21 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:39:30] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 22:37 run_atlas
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc       105 Nov 21 22:37 job.xml
[2025-11-23 00:39:30] -rw-r--r--. 2 boinc boinc 411831008 Nov 21 22:37 EVNT.47493065._000543.pool.root.1
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc      6390 Nov 21 22:37 init_data.xml
[2025-11-23 00:39:30] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:37 start_atlas.sh
[2025-11-23 00:39:30] drwxrwx--x. 2 boinc boinc        68 Nov 21 22:37 shared
[2025-11-23 00:39:30] -rw-r--r--. 2 boinc boinc    590097 Nov 21 22:37 input.tar.gz
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc         0 Nov 21 22:37 boinc_lockfile
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc      2773 Nov 21 22:37 pandaJob.out
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc    989798 Nov 21 22:41 agis_schedconf.cvmfs.json
[2025-11-23 00:39:30] drwx------. 5 boinc boinc      4096 Nov 21 22:41 pilot3
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc       533 Nov 23 00:23 boinc_task_state.xml
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc 934062379 Nov 23 00:36 HITS.47493068._005429.pool.root.1
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc      1029 Nov 23 00:36 memory_monitor_summary.json
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc   1526164 Nov 23 00:37 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc   2592539 Nov 23 00:37 log.47493068._005429.job.log.tgz.1
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc      7943 Nov 23 00:38 heartbeat.json
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc      8192 Nov 23 00:39 boinc_mmap_file
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc        29 Nov 23 00:39 wrapper_checkpoint.txt
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc        95 Nov 23 00:39 pilot_heartbeat.json
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc      4883 Nov 23 00:39 pilotlog.txt
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc  12452300 Nov 23 00:39 log.47493068._005429.job.log.1
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc       353 Nov 23 00:39 output.list
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc       620 Nov 23 00:39 runtime_log
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc  15063040 Nov 23 00:39 result.tar.gz
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc      8703 Nov 23 00:39 runtime_log.err
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc       662 Nov 23 00:39 IxDLDm59ef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5dFKDmTAvuPo.diag
[2025-11-23 00:39:30] -rw-r--r--. 1 boinc boinc     20958 Nov 23 00:39 stderr.txt
[2025-11-23 00:39:30] HITS file was successfully produced:
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc 934062379 Nov 23 00:36 shared/HITS.pool.root.1
[2025-11-23 00:39:30]  *** Contents of shared directory: ***
[2025-11-23 00:39:30] total 1329660
[2025-11-23 00:39:30] -rw-r--r--. 2 boinc boinc 411831008 Nov 21 22:37 ATLAS.root_0
[2025-11-23 00:39:30] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:37 start_atlas.sh
[2025-11-23 00:39:30] -rw-r--r--. 2 boinc boinc    590097 Nov 21 22:37 input.tar.gz
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc 934062379 Nov 23 00:36 HITS.pool.root.1
[2025-11-23 00:39:30] -rw-------. 1 boinc boinc  15063040 Nov 23 00:39 result.tar.gz
00:39:32 (32221): run_atlas exited; CPU time 345149.630822
00:39:32 (32221): called boinc_finish(0)

</stderr_txt>
]]>

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