Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:54:19 (9054): wrapper (7.7.26015): starting
23:54:19 (9054): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:54:19] Arguments: --nthreads 8
[2025-11-21 23:54:19] Threads: 8
[2025-11-21 23:54:19] Checking for CVMFS
[2025-11-21 23:54:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:54:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:54:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:54:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:54:21] 2.11.2.0 22322 203993 138448 153148 3 170 21620844 25165824 4632 130560 2 81445732 99.902 34267832 2527 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 23:54:21] CVMFS is ok
[2025-11-21 23:54:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:54:21] Checking for apptainer binary...
[2025-11-21 23:54:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:54:21] Running /usr/bin/apptainer --version
[2025-11-21 23:54:21] apptainer version 1.3.2-1.el7
[2025-11-21 23:54:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:54:34] cg-vwn447.simple-grid.lan
[2025-11-21 23:54:34] apptainer works
[2025-11-21 23:54:34] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:54:34] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:54:35] Starting ATLAS job with PandaID=6891585304
[2025-11-21 23:54:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:12:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:12:05] 2025-11-23 00:11:09,734 | INFO     | monitor loop #6099: job 0:6891585304 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 00:11:09,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 00:11:10,177 | INFO     | time since job start (90772s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 00:11:12,185 | INFO     | time since job start (90774s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 00:11:12,240 | INFO     | monitor loop #6100: job 0:6891585304 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 00:11:12,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 00:11:13,396 | INFO     | PID=12843 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 01:12:05] 2025-11-23 00:11:13,396 | INFO     | .. there are 9 such processes running
[2025-11-23 01:12:05] 2025-11-23 00:11:14,398 | INFO     | time since job start (90776s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 00:11:14,754 | INFO     | monitor loop #6101: job 0:6891585304 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 00:11:14,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 00:11:16,406 | INFO     | time since job start (90778s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 00:11:17,259 | INFO     | monitor loop #6102: job 0:6891585304 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 00:11:17,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 00:11:18,414 | INFO     | time since job start (90780s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 00:11:19,465 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:12:05] 2025-11-23 00:11:19,466 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 01:12:05] 2025-11-23 00:11:19,468 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891585304/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:12:05] 2025-11-23 00:11:19,469 | INFO     | extracted standard info from prmon json
[2025-11-23 01:12:05] 2025-11-23 00:11:19,470 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:12:05] 2025-11-23 00:11:19,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:12:05] 2025-11-23 00:11:19,500 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:12:05] 2025-11-23 00:11:19,502 | INFO     | sum of square deviations: 1001154243537.066
[2025-11-23 01:12:05] 2025-11-23 00:11:19,567 | INFO     | sum of deviations: 3699939365809.5337
[2025-11-23 01:12:05] 2025-11-23 00:11:19,567 | INFO     | mean x: 1763811499.638701
[2025-11-23 01:12:05] 2025-11-23 00:11:19,567 | INFO     | mean y: 2828764.5290933694
[2025-11-23 01:12:05] 2025-11-23 00:11:19,567 | INFO     | intersect: -6515642933.023236
[2025-11-23 01:12:05] 2025-11-23 00:11:19,569 | INFO     | chi2: 26.761996257081243
[2025-11-23 01:12:05] 2025-11-23 00:11:19,572 | INFO     | sum of square deviations: 991028511168.0613
[2025-11-23 01:12:05] 2025-11-23 00:11:19,634 | INFO     | sum of deviations: 4185839468160.779
[2025-11-23 01:12:05] 2025-11-23 00:11:19,634 | INFO     | mean x: 1763811347.1425662
[2025-11-23 01:12:05] 2025-11-23 00:11:19,634 | INFO     | mean y: 2836080.782077393
[2025-11-23 01:12:05] 2025-11-23 00:11:19,635 | INFO     | intersect: -7447031474.04466
[2025-11-23 01:12:05] 2025-11-23 00:11:19,636 | INFO     | chi2: 23.52929571513951
[2025-11-23 01:12:05] 2025-11-23 00:11:19,637 | INFO     | current chi2=23.52929571513951 (change=12.079444712897144 %)
[2025-11-23 01:12:05] 2025-11-23 00:11:19,637 | INFO     | right removable region: 1472
[2025-11-23 01:12:05] 2025-11-23 00:11:19,639 | INFO     | sum of square deviations: 991027484538.0616
[2025-11-23 01:12:05] 2025-11-23 00:11:19,702 | INFO     | sum of deviations: 3080540904425.5137
[2025-11-23 01:12:05] 2025-11-23 00:11:19,703 | INFO     | mean x: 1763811652.1425662
[2025-11-23 01:12:05] 2025-11-23 00:11:19,703 | INFO     | mean y: 2838091.854718262
[2025-11-23 01:12:05] 2025-11-23 00:11:19,703 | INFO     | intersect: -5479849348.100779
[2025-11-23 01:12:05] 2025-11-23 00:11:19,705 | INFO     | chi2: 22.007684258403657
[2025-11-23 01:12:05] 2025-11-23 00:11:19,706 | INFO     | current chi2=22.007684258403657 (change=17.76516203427684 %)
[2025-11-23 01:12:05] 2025-11-23 00:11:19,706 | INFO     | left removable region: 10
[2025-11-23 01:12:05] 2025-11-23 00:11:19,708 | INFO     | sum of square deviations: 968990684700.0924
[2025-11-23 01:12:05] 2025-11-23 00:11:19,768 | INFO     | sum of deviations: 3130377270093.017
[2025-11-23 01:12:05] 2025-11-23 00:11:19,768 | INFO     | mean x: 1763811621.6511629
[2025-11-23 01:12:05] 2025-11-23 00:11:19,768 | INFO     | mean y: 2855309.7804377563
[2025-11-23 01:12:05] 2025-11-23 00:11:19,768 | INFO     | intersect: -5695234358.492901
[2025-11-23 01:12:05] 2025-11-23 00:11:19,770 | INFO     | chi2: 14.494194682581915
[2025-11-23 01:12:05] 2025-11-23 00:11:19,770 | INFO     | current memory leak: 3.23 B/s (using 1462 data points, chi2=14.49)
[2025-11-23 01:12:05] 2025-11-23 00:11:19,773 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 01:12:05] 2025-11-23 00:11:19,773 | INFO     | ..............................
[2025-11-23 01:12:05] 2025-11-23 00:11:19,773 | INFO     | . Timing measurements:
[2025-11-23 01:12:05] 2025-11-23 00:11:19,773 | INFO     | . get job = 0 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,773 | INFO     | . initial setup = 12 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,773 | INFO     | . payload setup = 181 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,773 | INFO     | . stage-in = 0 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,774 | INFO     | . payload execution = 90276 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,774 | INFO     | . stage-out = 7 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,774 | INFO     | . log creation = 2 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,774 | INFO     | ..............................
[2025-11-23 01:12:05] 2025-11-23 00:11:19,901 | INFO     | 
[2025-11-23 01:12:05] 2025-11-23 00:11:19,901 | INFO     | job summary report
[2025-11-23 01:12:05] 2025-11-23 00:11:19,901 | INFO     | --------------------------------------------------
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | PanDA job id: 6891585304
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | task id: 47493068
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | errors: (none)
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | pilot state: finished 
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | transexitcode: 0
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | exeerrorcode: 0
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | exeerrordiag: 
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | exitcode: 0
[2025-11-23 01:12:05] 2025-11-23 00:11:19,902 | INFO     | exitmsg: OK
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | cpuconsumptiontime: 336093 s
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | nevents: 1000
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | neventsw: 0
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | pid: 19424
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | pgrp: 19424
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | corecount: 8
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | event service: False
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | sizes: {0: 2298569, 1: 2298653, 2: 2298852, 12: 2298852, 23: 2298880, 34: 2298908, 45: 2299064, 55: 2299092, 66: 2299120, 77: 2299148, 88: 2299204, 98: 2299714, 99
[2025-11-23 01:12:05] 2025-11-23 00:11:19,903 | INFO     | --------------------------------------------------
[2025-11-23 01:12:05] 2025-11-23 00:11:19,904 | INFO     | 
[2025-11-23 01:12:05] 2025-11-23 00:11:19,904 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-23 01:12:05] 2025-11-23 00:11:20,422 | INFO     | time since job start (90782s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 00:11:20,543 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | job 6891585304 has completed (purged errors)
[2025-11-23 01:12:05] 2025-11-23 00:11:20,545 | INFO     | overall cleanup function is called
[2025-11-23 01:12:05] 2025-11-23 00:11:21,564 | INFO     | --- collectZombieJob: --- 10, [19424]
[2025-11-23 01:12:05] 2025-11-23 00:11:21,565 | INFO     | zombie collector waiting for pid 19424
[2025-11-23 01:12:05] 2025-11-23 00:11:21,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:12:05] 2025-11-23 00:11:21,565 | INFO     | collected zombie processes
[2025-11-23 01:12:05] 2025-11-23 00:11:21,565 | INFO     | will attempt to kill all subprocesses of pid=19424
[2025-11-23 01:12:05] 2025-11-23 00:11:21,669 | INFO     | process IDs to be killed: [19424] (in reverse order)
[2025-11-23 01:12:05] 2025-11-23 00:11:22,702 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:12:05] 2025-11-23 00:11:22,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:12:05] 2025-11-23 00:11:22,706 | INFO     | did not find any defunct processes belonging to 19424
[2025-11-23 01:12:05] 2025-11-23 00:11:22,713 | INFO     | did not find any defunct processes belonging to 19424
[2025-11-23 01:12:05] 2025-11-23 00:11:22,778 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:12:05] 2025-11-23 00:11:22,778 | INFO     | ready for new job
[2025-11-23 01:12:05] 2025-11-23 00:11:22,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:12:05] 2025-11-23 00:11:22,785 | INFO     | ***************************************
[2025-11-23 01:12:05] 2025-11-23 00:11:22,785 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:12:05] 2025-11-23 00:11:22,785 | INFO     | ***************************************
[2025-11-23 01:12:05] 2025-11-23 00:11:22,785 | INFO     | 
[2025-11-23 01:12:05] 2025-11-23 00:11:22,786 | INFO     | pilot is running in a VM
[2025-11-23 01:12:05] 2025-11-23 00:11:22,786 | INFO     | architecture information:
[2025-11-23 01:12:05] 2025-11-23 00:11:22,795 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:12:05] 2025-11-23 00:11:23,039 | INFO     | cat /etc/os-release:
[2025-11-23 01:12:05] NAME="CentOS Linux"
[2025-11-23 01:12:05] VERSION="7 (Core)"
[2025-11-23 01:12:05] ID="centos"
[2025-11-23 01:12:05] ID_LIKE="rhel fedora"
[2025-11-23 01:12:05] VERSION_ID="7"
[2025-11-23 01:12:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:12:05] ANSI_COLOR="0;31"
[2025-11-23 01:12:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:12:05] HOME_URL="https://www.centos.org/"
[2025-11-23 01:12:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:12:05] 
[2025-11-23 01:12:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:12:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:12:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:12:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:12:05] 
[2025-11-23 01:12:05] 2025-11-23 00:11:23,039 | INFO     | ***************************************
[2025-11-23 01:12:05] 2025-11-23 00:11:23,543 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-23 01:12:05] 2025-11-23 00:11:23,848 | INFO     | sufficient remaining disk space (495017000960 B)
[2025-11-23 01:12:05] 2025-11-23 00:11:23,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:12:05] 2025-11-23 00:11:23,849 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:12:05] 2025-11-23 00:11:23,849 | INFO     | update_server=False
[2025-11-23 01:12:05] 2025-11-23 00:11:23,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:12:05] 2025-11-23 00:11:23,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 00:11:23,852 | INFO     | aborting loop
[2025-11-23 01:12:05] 2025-11-23 00:11:23,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 00:11:24,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 00:11:24,779 | INFO     | all data control threads have been joined
[2025-11-23 01:12:05] 2025-11-23 00:11:24,855 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:24,858 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:24,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 00:11:25,054 | INFO     | [job] validate thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:25,095 | INFO     | all payload control threads have been joined
[2025-11-23 01:12:05] 2025-11-23 00:11:25,162 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:25,382 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:25,434 | INFO     | all job control threads have been joined
[2025-11-23 01:12:05] 2025-11-23 00:11:25,540 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:25,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:25,717 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:25,786 | INFO     | [data] control thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:25,925 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:26,013 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:26,101 | INFO     | [payload] control thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:26,263 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:26,336 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:26,440 | INFO     | [job] control thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:27,896 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:12:05] 2025-11-23 00:11:53,612 | INFO     | PID=12843 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 01:12:05] 2025-11-23 00:11:53,613 | INFO     | .. there are 9 such processes running
[2025-11-23 01:12:05] 2025-11-23 00:11:53,614 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:12:05] 2025-11-23 00:11:53,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:12:05] 2025-11-23 00:11:53,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:12:05] 2025-11-23 00:11:55,591 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:12:05] 2025-11-23 00:11:56,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910616356672)>', '<ExcThread(monitor, started 139910321248000)>']
[2025-11-23 01:12:05] 2025-11-23 00:11:56,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:12:05] 2025-11-23 00:11:56,633 | INFO     | [monitor] control thread has ended
[2025-11-23 01:12:05] 2025-11-23 00:12:01,635 | INFO     | all workflow threads have been joined
[2025-11-23 01:12:05] 2025-11-23 00:12:01,636 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:12:05] 2025-11-23 00:12:01,636 | INFO     | traces error code: 0
[2025-11-23 01:12:05] 2025-11-23 00:12:01,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:12:05] 2025-11-23 00:12:02,002 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:12:05] 2025-11-23 00:12:02,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:12:05] 2025-11-23 00:12:02,223 [wrapper] pilotpid: 12843
[2025-11-23 01:12:05] 2025-11-23 00:12:02,318 [wrapper] Pilot exit status: 0
[2025-11-23 01:12:05] 2025-11-23 00:12:02,776 [wrapper] pandaids: 6891585304
[2025-11-23 01:12:05] 2025-11-23 00:12:03,619 [wrapper] cleanup supervisor_pilot 32132 12844
[2025-11-23 01:12:05] 2025-11-23 00:12:03,665 [wrapper] Test setup, not cleaning
[2025-11-23 01:12:05] 2025-11-23 00:12:03,753 [wrapper] apfmon messages muted
[2025-11-23 01:12:05] 2025-11-23 00:12:03,833 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:12:05] 2025-11-23 00:12:03,919 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:12:05]  *** Error codes and diagnostics ***
[2025-11-23 01:12:05]     "exeErrorCode": 0,
[2025-11-23 01:12:05]     "exeErrorDiag": "",
[2025-11-23 01:12:05]     "pilotErrorCode": 0,
[2025-11-23 01:12:05]     "pilotErrorDiag": "",
[2025-11-23 01:12:05]  *** Listing of results directory ***
[2025-11-23 01:12:05] total 1325568
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:24 queuedata.json
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-23 01:12:05] -rwx------. 1 boinc boinc     36292 Nov 18 18:25 runpilot2-wrapper.sh
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc       100 Nov 21 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:12:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 23:54 run_atlas
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc       105 Nov 21 23:54 job.xml
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc      6389 Nov 21 23:54 init_data.xml
[2025-11-23 01:12:05] -rw-r--r--. 2 boinc boinc 411979224 Nov 21 23:54 EVNT.47493065._000477.pool.root.1
[2025-11-23 01:12:05] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:54 start_atlas.sh
[2025-11-23 01:12:05] drwxrwx--x. 2 boinc boinc        68 Nov 21 23:54 shared
[2025-11-23 01:12:05] -rw-r--r--. 2 boinc boinc    590101 Nov 21 23:54 input.tar.gz
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc         0 Nov 21 23:54 boinc_lockfile
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc      2773 Nov 21 23:54 pandaJob.out
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc    989798 Nov 21 23:58 agis_schedconf.cvmfs.json
[2025-11-23 01:12:05] drwx------. 5 boinc boinc      4096 Nov 21 23:58 pilot3
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc       533 Nov 23 00:44 boinc_task_state.xml
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc 912145295 Nov 23 01:08 HITS.47493068._004767.pool.root.1
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc      1029 Nov 23 01:09 memory_monitor_summary.json
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc   1526164 Nov 23 01:09 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc   2567614 Nov 23 01:09 log.47493068._004767.job.log.tgz.1
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc      8631 Nov 23 01:11 heartbeat.json
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc      8192 Nov 23 01:11 boinc_mmap_file
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc        29 Nov 23 01:11 wrapper_checkpoint.txt
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc        95 Nov 23 01:11 pilot_heartbeat.json
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc      4884 Nov 23 01:12 pilotlog.txt
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc  12107174 Nov 23 01:12 log.47493068._004767.job.log.1
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc       353 Nov 23 01:12 output.list
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc       620 Nov 23 01:12 runtime_log
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc  14694400 Nov 23 01:12 result.tar.gz
[2025-11-23 01:12:05] -rw-------. 1 boinc boinc       662 Nov 23 01:12 UjPNDm4cef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK2FKDmQ3xJ3m.diag
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc      8703 Nov 23 01:12 runtime_log.err
[2025-11-23 01:12:05] -rw-r--r--. 1 boinc boinc     21501 Nov 23 01:12 stderr.txt
[2025-11-23 01:12:06] HITS file was successfully produced:
[2025-11-23 01:12:06] -rw-------. 1 boinc boinc 912145295 Nov 23 01:08 shared/HITS.pool.root.1
[2025-11-23 01:12:06]  *** Contents of shared directory: ***
[2025-11-23 01:12:06] total 1308040
[2025-11-23 01:12:06] -rw-r--r--. 2 boinc boinc 411979224 Nov 21 23:54 ATLAS.root_0
[2025-11-23 01:12:06] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:54 start_atlas.sh
[2025-11-23 01:12:06] -rw-r--r--. 2 boinc boinc    590101 Nov 21 23:54 input.tar.gz
[2025-11-23 01:12:06] -rw-------. 1 boinc boinc 912145295 Nov 23 01:08 HITS.pool.root.1
[2025-11-23 01:12:06] -rw-------. 1 boinc boinc  14694400 Nov 23 01:12 result.tar.gz
01:12:07 (9054): run_atlas exited; CPU time 336733.802319
01:12:07 (9054): called boinc_finish(0)

</stderr_txt>
]]>

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