Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:00:07 (1209839): wrapper (7.7.26015): starting
00:00:07 (1209839): wrapper: running run_atlas (--nthreads 3)
[2025-11-20 00:00:07] Arguments: --nthreads 3
[2025-11-20 00:00:07] Threads: 3
[2025-11-20 00:00:07] Checking for CVMFS
[2025-11-20 00:00:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 00:00:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 00:00:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 00:00:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 00:00:43] 2.9.2.0 1210049 0 30044 153059 3 1 36115382 36864001 0 130560 0 0 0.000 1292 3845 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 00:00:43] CVMFS is ok
[2025-11-20 00:00:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 00:00:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 00:00:43] Further information can be found at the LHC@home message board.
[2025-11-20 00:00:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 00:00:43] Checking for apptainer binary...
[2025-11-20 00:00:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 00:00:43] Running /usr/bin/apptainer --version
[2025-11-20 00:00:43] apptainer version 1.4.1-1.1
[2025-11-20 00:00:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 00:00:43] atlasA215
[2025-11-20 00:00:43] apptainer works
[2025-11-20 00:00:43] Set ATHENA_PROC_NUMBER=3
[2025-11-20 00:00:43] Set ATHENA_CORE_NUMBER=3
[2025-11-20 00:00:43] Starting ATLAS job with PandaID=6891589274
[2025-11-20 00:00:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 07:53:12]  *** The last 200 lines of the pilot log: ***
[2025-11-20 07:53:12] 2025-11-20 06:52:40,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,548 | INFO     | PID=1214133 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 07:53:12] 2025-11-20 06:52:40,707 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 07:53:12] 2025-11-20 06:52:40,708 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3792.8315
[2025-11-20 07:53:12] 2025-11-20 06:52:40,709 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891589274/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,709 | INFO     | extracted standard info from prmon json
[2025-11-20 07:53:12] 2025-11-20 06:52:40,709 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 07:53:12] 2025-11-20 06:52:40,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 07:53:12] 2025-11-20 06:52:40,712 | INFO     | fitting pss+swap vs Time
[2025-11-20 07:53:12] 2025-11-20 06:52:40,712 | INFO     | sum of square deviations: 30976357540.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,714 | INFO     | sum of deviations: 156707262293.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,714 | INFO     | mean x: 1763607418.5
[2025-11-20 07:53:12] 2025-11-20 06:52:40,714 | INFO     | mean y: 2146332.2844827585
[2025-11-20 07:53:12] 2025-11-20 06:52:40,714 | INFO     | intersect: -8919822299.95
[2025-11-20 07:53:12] 2025-11-20 06:52:40,715 | INFO     | chi2: 4.277584538379165
[2025-11-20 07:53:12] 2025-11-20 06:52:40,715 | INFO     | sum of square deviations: 29985715710.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,716 | INFO     | sum of deviations: 232600612983.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,716 | INFO     | mean x: 1763607266.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,716 | INFO     | mean y: 2157968.8017429193
[2025-11-20 07:53:12] 2025-11-20 06:52:40,716 | INFO     | intersect: -13678226888.447767
[2025-11-20 07:53:12] 2025-11-20 06:52:40,717 | INFO     | chi2: 2.2696110520262183
[2025-11-20 07:53:12] 2025-11-20 06:52:40,717 | INFO     | current chi2=2.2696110520262183 (change=46.941760433653414 %)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,717 | INFO     | sum of square deviations: 29016423117.5
[2025-11-20 07:53:12] 2025-11-20 06:52:40,718 | INFO     | sum of deviations: 227866673700.9998
[2025-11-20 07:53:12] 2025-11-20 06:52:40,719 | INFO     | mean x: 1763607113.5
[2025-11-20 07:53:12] 2025-11-20 06:52:40,719 | INFO     | mean y: 2157224.026431718
[2025-11-20 07:53:12] 2025-11-20 06:52:40,719 | INFO     | intersect: -13847492163.885124
[2025-11-20 07:53:12] 2025-11-20 06:52:40,719 | INFO     | chi2: 2.2694355178113654
[2025-11-20 07:53:12] 2025-11-20 06:52:40,719 | INFO     | current chi2=2.2694355178113654 (change=0.007734109978717499 %)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,719 | INFO     | right removable region: 453
[2025-11-20 07:53:12] 2025-11-20 06:52:40,719 | INFO     | sum of square deviations: 29985715710.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,721 | INFO     | sum of deviations: 64599504531.000015
[2025-11-20 07:53:12] 2025-11-20 06:52:40,721 | INFO     | mean x: 1763607571.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,721 | INFO     | mean y: 2160488.6013071896
[2025-11-20 07:53:12] 2025-11-20 06:52:40,721 | INFO     | intersect: -3797254418.6682324
[2025-11-20 07:53:12] 2025-11-20 06:52:40,721 | INFO     | chi2: 2.279951416545018
[2025-11-20 07:53:12] 2025-11-20 06:52:40,721 | INFO     | current chi2=2.279951416545018 (change=46.700026706919914 %)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,721 | INFO     | sum of square deviations: 29016423117.5
[2025-11-20 07:53:12] 2025-11-20 06:52:40,723 | INFO     | sum of deviations: 39668815175.5
[2025-11-20 07:53:12] 2025-11-20 06:52:40,723 | INFO     | mean x: 1763607723.5
[2025-11-20 07:53:12] 2025-11-20 06:52:40,723 | INFO     | mean y: 2164394.4823788544
[2025-11-20 07:53:12] 2025-11-20 06:52:40,723 | INFO     | intersect: -2408891873.2838683
[2025-11-20 07:53:12] 2025-11-20 06:52:40,723 | INFO     | chi2: 2.0591163984259593
[2025-11-20 07:53:12] 2025-11-20 06:52:40,723 | INFO     | current chi2=2.0591163984259593 (change=9.685952802174475 %)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,723 | INFO     | left removable region: 20
[2025-11-20 07:53:12] 2025-11-20 06:52:40,724 | INFO     | sum of square deviations: 25173279432.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,725 | INFO     | sum of deviations: 97409898623.99998
[2025-11-20 07:53:12] 2025-11-20 06:52:40,725 | INFO     | mean x: 1763607693.0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,725 | INFO     | mean y: 2178180.277136259
[2025-11-20 07:53:12] 2025-11-20 06:52:40,725 | INFO     | intersect: -6822234469.322077
[2025-11-20 07:53:12] 2025-11-20 06:52:40,725 | INFO     | chi2: 0.0205485674981771
[2025-11-20 07:53:12] 2025-11-20 06:52:40,725 | INFO     | current memory leak: 3.87 B/s (using 433 data points, chi2=0.02)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,725 | INFO     | could have reported an average CPU frequency of 4178 MHz (19 samples)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | ..............................
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . Timing measurements:
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . get job = 0 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . initial setup = 1 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . payload setup = 3 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . stage-in = 0 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . payload execution = 28255 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . stage-out = 1 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | . log creation = 0 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,726 | INFO     | ..............................
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | 
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | job summary report
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | --------------------------------------------------
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | PanDA job id: 6891589274
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | task id: 47493068
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | errors: (none)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | pilot state: finished 
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | transexitcode: 0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | exeerrorcode: 0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | exeerrordiag: 
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | exitcode: 0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | exitmsg: OK
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | cpuconsumptiontime: 83436 s
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | nevents: 1000
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | neventsw: 0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | pid: 1220579
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | pgrp: 1220579
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | corecount: 3
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | event service: False
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | sizes: {0: 2297203, 2: 2297465, 10: 2297493, 28261: 2336167, 28262: 2336166, 28263: 2345222, 28266: 2345406, 28270: 2345652}
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | --------------------------------------------------
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | 
[2025-11-20 07:53:12] 2025-11-20 06:52:40,755 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-20 07:53:12] 2025-11-20 06:52:40,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | job 6891589274 has completed (purged errors)
[2025-11-20 07:53:12] 2025-11-20 06:52:40,768 | INFO     | overall cleanup function is called
[2025-11-20 07:53:12] 2025-11-20 06:52:41,776 | INFO     | --- collectZombieJob: --- 10, [1220579]
[2025-11-20 07:53:12] 2025-11-20 06:52:41,776 | INFO     | zombie collector waiting for pid 1220579
[2025-11-20 07:53:12] 2025-11-20 06:52:41,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 07:53:12] 2025-11-20 06:52:41,777 | INFO     | collected zombie processes
[2025-11-20 07:53:12] 2025-11-20 06:52:41,777 | INFO     | will attempt to kill all subprocesses of pid=1220579
[2025-11-20 07:53:12] 2025-11-20 06:52:41,838 | INFO     | process IDs to be killed: [1220579] (in reverse order)
[2025-11-20 07:53:12] 2025-11-20 06:52:41,867 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 07:53:12] 2025-11-20 06:52:41,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 07:53:12] 2025-11-20 06:52:41,869 | INFO     | did not find any defunct processes belonging to 1220579
[2025-11-20 07:53:12] 2025-11-20 06:52:41,870 | INFO     | did not find any defunct processes belonging to 1220579
[2025-11-20 07:53:12] 2025-11-20 06:52:41,871 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 07:53:12] 2025-11-20 06:52:41,871 | INFO     | ready for new job
[2025-11-20 07:53:12] 2025-11-20 06:52:41,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 07:53:12] 2025-11-20 06:52:41,872 | INFO     | ***************************************
[2025-11-20 07:53:12] 2025-11-20 06:52:41,872 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 07:53:12] 2025-11-20 06:52:41,872 | INFO     | ***************************************
[2025-11-20 07:53:12] 2025-11-20 06:52:41,872 | INFO     | 
[2025-11-20 07:53:12] 2025-11-20 06:52:41,873 | INFO     | architecture information:
[2025-11-20 07:53:12] 2025-11-20 06:52:41,873 | INFO     | executing command: cat /etc/os-release
[2025-11-20 07:53:12] 2025-11-20 06:52:41,882 | INFO     | cat /etc/os-release:
[2025-11-20 07:53:12] NAME="CentOS Linux"
[2025-11-20 07:53:12] VERSION="7 (Core)"
[2025-11-20 07:53:12] ID="centos"
[2025-11-20 07:53:12] ID_LIKE="rhel fedora"
[2025-11-20 07:53:12] VERSION_ID="7"
[2025-11-20 07:53:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 07:53:12] ANSI_COLOR="0;31"
[2025-11-20 07:53:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 07:53:12] HOME_URL="https://www.centos.org/"
[2025-11-20 07:53:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 07:53:12] 
[2025-11-20 07:53:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 07:53:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 07:53:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 07:53:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 07:53:12] 
[2025-11-20 07:53:12] 2025-11-20 06:52:41,882 | INFO     | ***************************************
[2025-11-20 07:53:12] 2025-11-20 06:52:42,384 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-20 07:53:12] 2025-11-20 06:52:42,394 | INFO     | sufficient remaining disk space (367337144320 B)
[2025-11-20 07:53:12] 2025-11-20 06:52:42,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 07:53:12] 2025-11-20 06:52:42,395 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 07:53:12] 2025-11-20 06:52:42,395 | INFO     | update_server=False
[2025-11-20 07:53:12] 2025-11-20 06:52:42,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 07:53:12] 2025-11-20 06:52:42,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 07:53:12] 2025-11-20 06:52:42,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 07:53:12] 2025-11-20 06:52:42,588 | INFO     | all job control threads have been joined
[2025-11-20 07:53:12] 2025-11-20 06:52:42,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 07:53:12] 2025-11-20 06:52:42,864 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 07:53:12] 2025-11-20 06:52:42,865 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 07:53:12] 2025-11-20 06:52:42,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 07:53:12] 2025-11-20 06:52:42,865 | INFO     | will abort loop
[2025-11-20 07:53:12] 2025-11-20 06:52:43,168 | INFO     | all payload control threads have been joined
[2025-11-20 07:53:12] 2025-11-20 06:52:43,391 | INFO     | all data control threads have been joined
[2025-11-20 07:53:12] 2025-11-20 06:52:43,395 | INFO     | [job] queue monitor thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:43,399 | INFO     | [job] retrieve thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:43,444 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:43,593 | INFO     | [job] control thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:43,870 | INFO     | [job] job monitor thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:43,882 | INFO     | [job] validate thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:43,997 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,018 | INFO     | [payload] failed_post thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,071 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,170 | INFO     | [payload] control thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,395 | INFO     | [data] copytool_out thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,396 | INFO     | [data] control thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,541 | INFO     | [payload] validate_post thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:44,873 | INFO     | [data] copytool_in thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:46,756 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 07:53:12] 2025-11-20 06:52:51,959 | INFO     | [monitor] cgroup control has ended
[2025-11-20 07:53:12] 2025-11-20 06:52:53,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910859687744)>', '<ExcThread(monitor, started 139910237386496)>']
[2025-11-20 07:53:12] 2025-11-20 06:52:58,168 | INFO     | all workflow threads have been joined
[2025-11-20 07:53:12] 2025-11-20 06:52:58,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 07:53:12] 2025-11-20 06:52:58,168 | INFO     | traces error code: 0
[2025-11-20 07:53:12] 2025-11-20 06:52:58,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 07:53:12] 2025-11-20 06:53:12,689 | INFO     | PID=1214133 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 07:53:12] 2025-11-20 06:53:12,690 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 07:53:12] 2025-11-20 06:53:12,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 07:53:12] 2025-11-20 06:53:12,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 07:53:12] 2025-11-20 06:53:12,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 07:53:12] 2025-11-20 06:53:12,690 | INFO     | [monitor] control thread has ended
[2025-11-20 07:53:12] 2025-11-20 06:53:12,738 [wrapper] ==== pilot stdout END ====
[2025-11-20 07:53:12] 2025-11-20 06:53:12,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 07:53:12] 2025-11-20 06:53:12,743 [wrapper] pilotpid: 1214133
[2025-11-20 07:53:12] 2025-11-20 06:53:12,745 [wrapper] Pilot exit status: 0
[2025-11-20 07:53:12] 2025-11-20 06:53:12,752 [wrapper] pandaids: 6891589274
[2025-11-20 07:53:12] 2025-11-20 06:53:12,771 [wrapper] cleanup supervisor_pilot 1278556 1214134
[2025-11-20 07:53:12] 2025-11-20 06:53:12,774 [wrapper] Test setup, not cleaning
[2025-11-20 07:53:12] 2025-11-20 06:53:12,776 [wrapper] apfmon messages muted
[2025-11-20 07:53:12] 2025-11-20 06:53:12,778 [wrapper] ==== wrapper stdout END ====
[2025-11-20 07:53:12] 2025-11-20 06:53:12,781 [wrapper] ==== wrapper stderr END ====
[2025-11-20 07:53:12]  *** Error codes and diagnostics ***
[2025-11-20 07:53:12]     "exeErrorCode": 0,
[2025-11-20 07:53:12]     "exeErrorDiag": "",
[2025-11-20 07:53:12]     "pilotErrorCode": 0,
[2025-11-20 07:53:12]     "pilotErrorDiag": "",
[2025-11-20 07:53:12]  *** Listing of results directory ***
[2025-11-20 07:53:12] total 1316440
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:43 queuedata.json
[2025-11-20 07:53:12] -rwx------ 1 boinc boinc     36292 Nov 18 18:45 runpilot2-wrapper.sh
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc       100 Nov 20 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 07:53:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 00:00 run_atlas
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc       105 Nov 20 00:00 job.xml
[2025-11-20 07:53:12] -rw-r--r-- 2 boinc boinc 410850005 Nov 20 00:00 EVNT.47493065._000527.pool.root.1
[2025-11-20 07:53:12] -rw-r--r-- 2 boinc boinc    590102 Nov 20 00:00 input.tar.gz
[2025-11-20 07:53:12] -rw-r--r-- 2 boinc boinc     15120 Nov 20 00:00 start_atlas.sh
[2025-11-20 07:53:12] drwxrwx--x 2 boinc boinc      4096 Nov 20 00:00 shared
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc         0 Nov 20 00:00 boinc_setup_complete
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc      6449 Nov 20 00:00 init_data.xml
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc         0 Nov 20 00:00 boinc_lockfile
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc      2773 Nov 20 00:00 pandaJob.out
[2025-11-20 07:53:12] -rw------- 1 boinc boinc    989435 Nov 20 00:01 agis_schedconf.cvmfs.json
[2025-11-20 07:53:12] drwx------ 5 boinc boinc      4096 Nov 20 00:01 pilot3
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc       531 Nov 20 07:48 boinc_task_state.xml
[2025-11-20 07:53:12] -rw------- 1 boinc boinc 922981742 Nov 20 07:52 HITS.47493068._005263.pool.root.1
[2025-11-20 07:53:12] -rw------- 1 boinc boinc      1019 Nov 20 07:52 memory_monitor_summary.json
[2025-11-20 07:53:12] -rw------- 1 boinc boinc   1525063 Nov 20 07:52 agis_ddmendpoints.agis.ALL.json
[2025-11-20 07:53:12] -rw------- 1 boinc boinc   1162480 Nov 20 07:52 log.47493068._005263.job.log.tgz.1
[2025-11-20 07:53:12] -rw------- 1 boinc boinc      8578 Nov 20 07:52 heartbeat.json
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc      8192 Nov 20 07:52 boinc_mmap_file
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc        28 Nov 20 07:52 wrapper_checkpoint.txt
[2025-11-20 07:53:12] -rw------- 1 boinc boinc       747 Nov 20 07:53 pilotlog.txt
[2025-11-20 07:53:12] -rw------- 1 boinc boinc        95 Nov 20 07:53 pilot_heartbeat.json
[2025-11-20 07:53:12] -rw------- 1 boinc boinc   3977935 Nov 20 07:53 log.47493068._005263.job.log.1
[2025-11-20 07:53:12] -rw------- 1 boinc boinc       353 Nov 20 07:53 output.list
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc       620 Nov 20 07:53 runtime_log
[2025-11-20 07:53:12] -rw------- 1 boinc boinc   5160960 Nov 20 07:53 result.tar.gz
[2025-11-20 07:53:12] -rw------- 1 boinc boinc       668 Nov 20 07:53 sg3NDmfwef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAcFKDm7f03Wo.diag
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc      8793 Nov 20 07:53 runtime_log.err
[2025-11-20 07:53:12] -rw-r--r-- 1 boinc boinc     21347 Nov 20 07:53 stderr.txt
[2025-11-20 07:53:12] HITS file was successfully produced:
[2025-11-20 07:53:12] -rw------- 1 boinc boinc 922981742 Nov 20 07:52 shared/HITS.pool.root.1
[2025-11-20 07:53:12]  *** Contents of shared directory: ***
[2025-11-20 07:53:12] total 1308220
[2025-11-20 07:53:12] -rw-r--r-- 2 boinc boinc 410850005 Nov 20 00:00 ATLAS.root_0
[2025-11-20 07:53:12] -rw-r--r-- 2 boinc boinc    590102 Nov 20 00:00 input.tar.gz
[2025-11-20 07:53:12] -rw-r--r-- 2 boinc boinc     15120 Nov 20 00:00 start_atlas.sh
[2025-11-20 07:53:12] -rw------- 1 boinc boinc 922981742 Nov 20 07:52 HITS.pool.root.1
[2025-11-20 07:53:12] -rw------- 1 boinc boinc   5160960 Nov 20 07:53 result.tar.gz
07:53:14 (1209839): run_atlas exited; CPU time 83511.975745
07:53:14 (1209839): called boinc_finish(0)

</stderr_txt>
]]>

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