Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:18 (9227): wrapper (7.7.26015): starting
22:23:18 (9227): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:23:18] Arguments: --nthreads 8
[2025-11-21 22:23:18] Threads: 8
[2025-11-21 22:23:18] Checking for CVMFS
[2025-11-21 22:23:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:23:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:23:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:23:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:23:19] 2.11.2.0 22894 74901 113564 153143 2 236 18607512 25165824 3667 130560 2 21680468 99.836 14236607 1988 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 22:23:19] CVMFS is ok
[2025-11-21 22:23:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:23:19] Checking for apptainer binary...
[2025-11-21 22:23:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:23:19] Running /usr/bin/apptainer --version
[2025-11-21 22:23:19] apptainer version 1.3.2-1.el7
[2025-11-21 22:23:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:23:20] cg-vwn425.simple-grid.lan
[2025-11-21 22:23:20] apptainer works
[2025-11-21 22:23:20] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:23:20] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:23:20] Starting ATLAS job with PandaID=6891587785
[2025-11-21 22:23:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:34:31]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:34:31] 2025-11-22 22:33:34,826 | INFO     | monitor loop #6033: job 0:6891587785 is in state 'finished'
[2025-11-22 23:34:31] 2025-11-22 22:33:34,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:34:31] 2025-11-22 22:33:35,467 | INFO     | time since job start (90592s) is within the limit (172800.0s)
[2025-11-22 23:34:31] 2025-11-22 22:33:37,330 | INFO     | monitor loop #6034: job 0:6891587785 is in state 'finished'
[2025-11-22 23:34:31] 2025-11-22 22:33:37,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:34:31] 2025-11-22 22:33:37,475 | INFO     | time since job start (90594s) is within the limit (172800.0s)
[2025-11-22 23:34:31] 2025-11-22 22:33:39,487 | INFO     | time since job start (90596s) is within the limit (172800.0s)
[2025-11-22 23:34:31] 2025-11-22 22:33:39,487 | INFO     | 90598s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 23:34:31] 2025-11-22 22:33:39,839 | INFO     | monitor loop #6035: job 0:6891587785 is in state 'finished'
[2025-11-22 23:34:31] 2025-11-22 22:33:39,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:34:31] 2025-11-22 22:33:41,493 | INFO     | time since job start (90598s) is within the limit (172800.0s)
[2025-11-22 23:34:31] 2025-11-22 22:33:42,344 | INFO     | monitor loop #6036: job 0:6891587785 is in state 'finished'
[2025-11-22 23:34:31] 2025-11-22 22:33:42,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:34:31] 2025-11-22 22:33:42,689 | INFO     | PID=12970 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:34:31] 2025-11-22 22:33:42,689 | INFO     | .. there are 9 such processes running
[2025-11-22 23:34:31] 2025-11-22 22:33:43,231 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 23:34:31] 2025-11-22 22:33:43,232 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 23:34:31] 2025-11-22 22:33:43,234 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6891587785/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:34:31] 2025-11-22 22:33:43,234 | INFO     | extracted standard info from prmon json
[2025-11-22 23:34:31] 2025-11-22 22:33:43,234 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:34:31] 2025-11-22 22:33:43,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:34:31] 2025-11-22 22:33:43,263 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:34:31] 2025-11-22 22:33:43,266 | INFO     | sum of square deviations: 1011347945966.4396
[2025-11-22 23:34:31] 2025-11-22 22:33:43,333 | INFO     | sum of deviations: 2179057453670.9255
[2025-11-22 23:34:31] 2025-11-22 22:33:43,333 | INFO     | mean x: 1763805483.3351314
[2025-11-22 23:34:31] 2025-11-22 22:33:43,334 | INFO     | mean y: 2850289.2798381657
[2025-11-22 23:34:31] 2025-11-22 22:33:43,334 | INFO     | intersect: -3797457508.4626093
[2025-11-22 23:34:31] 2025-11-22 22:33:43,336 | INFO     | chi2: 18.122787369747883
[2025-11-22 23:34:31] 2025-11-22 22:33:43,338 | INFO     | sum of square deviations: 1001153558704.9961
[2025-11-22 23:34:31] 2025-11-22 22:33:43,397 | INFO     | sum of deviations: 2662922235510.9595
[2025-11-22 23:34:31] 2025-11-22 22:33:43,401 | INFO     | mean x: 1763805330.8396482
[2025-11-22 23:34:31] 2025-11-22 22:33:43,401 | INFO     | mean y: 2857526.3795669824
[2025-11-22 23:34:31] 2025-11-22 22:33:43,402 | INFO     | intersect: -4688607028.449693
[2025-11-22 23:34:31] 2025-11-22 22:33:43,403 | INFO     | chi2: 14.936185409919352
[2025-11-22 23:34:31] 2025-11-22 22:33:43,404 | INFO     | current chi2=14.936185409919352 (change=17.583398705807703 %)
[2025-11-22 23:34:31] 2025-11-22 22:33:43,404 | INFO     | right removable region: 1477
[2025-11-22 23:34:31] 2025-11-22 22:33:43,406 | INFO     | sum of square deviations: 1001152350904.9954
[2025-11-22 23:34:31] 2025-11-22 22:33:43,476 | INFO     | sum of deviations: 1734043081000.3582
[2025-11-22 23:34:31] 2025-11-22 22:33:43,477 | INFO     | mean x: 1763805635.8396482
[2025-11-22 23:34:31] 2025-11-22 22:33:43,477 | INFO     | mean y: 2856942.6935047363
[2025-11-22 23:34:31] 2025-11-22 22:33:43,477 | INFO     | intersect: -3052137590.6484222
[2025-11-22 23:34:31] 2025-11-22 22:33:43,479 | INFO     | chi2: 15.747893318749117
[2025-11-22 23:34:31] 2025-11-22 22:33:43,479 | INFO     | current chi2=15.747893318749117 (change=13.104463472120978 %)
[2025-11-22 23:34:31] 2025-11-22 22:33:43,479 | INFO     | left removable region: 10
[2025-11-22 23:34:31] 2025-11-22 22:33:43,481 | INFO     | sum of square deviations: 978965596598.0878
[2025-11-22 23:34:31] 2025-11-22 22:33:43,541 | INFO     | sum of deviations: 2226027502911.4985
[2025-11-22 23:34:31] 2025-11-22 22:33:43,541 | INFO     | mean x: 1763805605.3462849
[2025-11-22 23:34:31] 2025-11-22 22:33:43,541 | INFO     | mean y: 2867337.2017723243
[2025-11-22 23:34:31] 2025-11-22 22:33:43,542 | INFO     | intersect: -4007773895.681328
[2025-11-22 23:34:31] 2025-11-22 22:33:43,543 | INFO     | chi2: 11.738696644746181
[2025-11-22 23:34:31] 2025-11-22 22:33:43,544 | INFO     | current memory leak: 2.27 B/s (using 1467 data points, chi2=11.74)
[2025-11-22 23:34:31] 2025-11-22 22:33:43,546 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 23:34:31] 2025-11-22 22:33:43,546 | INFO     | ..............................
[2025-11-22 23:34:31] 2025-11-22 22:33:43,546 | INFO     | . Timing measurements:
[2025-11-22 23:34:31] 2025-11-22 22:33:43,546 | INFO     | . get job = 0 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,546 | INFO     | . initial setup = 2 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,546 | INFO     | . payload setup = 11 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,547 | INFO     | . stage-in = 0 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,547 | INFO     | . payload execution = 90468 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,547 | INFO     | . stage-out = 5 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,547 | INFO     | . log creation = 2 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,547 | INFO     | ..............................
[2025-11-22 23:34:31] 2025-11-22 22:33:43,690 | INFO     | time since job start (90600s) is within the limit (172800.0s)
[2025-11-22 23:34:31] 2025-11-22 22:33:43,962 | INFO     | 
[2025-11-22 23:34:31] 2025-11-22 22:33:43,962 | INFO     | job summary report
[2025-11-22 23:34:31] 2025-11-22 22:33:43,962 | INFO     | --------------------------------------------------
[2025-11-22 23:34:31] 2025-11-22 22:33:43,962 | INFO     | PanDA job id: 6891587785
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | task id: 47493068
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | errors: (none)
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | pilot state: finished 
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | transexitcode: 0
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | exeerrorcode: 0
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | exeerrordiag: 
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | exitcode: 0
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | exitmsg: OK
[2025-11-22 23:34:31] 2025-11-22 22:33:43,963 | INFO     | cpuconsumptiontime: 336255 s
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | nevents: 1000
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | neventsw: 0
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | pid: 19489
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | pgrp: 19489
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | corecount: 8
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | event service: False
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | sizes: {0: 2298626, 1: 2298825, 9: 2299087, 11: 2299115, 90484: 2362865, 90489: 2372045, 90581: 2372235}
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | --------------------------------------------------
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | 
[2025-11-22 23:34:31] 2025-11-22 22:33:43,964 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-22 23:34:31] 2025-11-22 22:33:44,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | job 6891587785 has completed (purged errors)
[2025-11-22 23:34:31] 2025-11-22 22:33:44,449 | INFO     | overall cleanup function is called
[2025-11-22 23:34:31] 2025-11-22 22:33:45,471 | INFO     | --- collectZombieJob: --- 10, [19489]
[2025-11-22 23:34:31] 2025-11-22 22:33:45,471 | INFO     | zombie collector waiting for pid 19489
[2025-11-22 23:34:31] 2025-11-22 22:33:45,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:34:31] 2025-11-22 22:33:45,471 | INFO     | collected zombie processes
[2025-11-22 23:34:31] 2025-11-22 22:33:45,471 | INFO     | will attempt to kill all subprocesses of pid=19489
[2025-11-22 23:34:31] 2025-11-22 22:33:45,611 | INFO     | process IDs to be killed: [19489] (in reverse order)
[2025-11-22 23:34:31] 2025-11-22 22:33:46,501 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:34:31] 2025-11-22 22:33:46,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:34:31] 2025-11-22 22:33:46,505 | INFO     | did not find any defunct processes belonging to 19489
[2025-11-22 23:34:31] 2025-11-22 22:33:46,509 | INFO     | did not find any defunct processes belonging to 19489
[2025-11-22 23:34:31] 2025-11-22 22:33:46,549 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:34:31] 2025-11-22 22:33:46,550 | INFO     | ready for new job
[2025-11-22 23:34:31] 2025-11-22 22:33:46,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:34:31] 2025-11-22 22:33:46,557 | INFO     | ***************************************
[2025-11-22 23:34:31] 2025-11-22 22:33:46,557 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:34:31] 2025-11-22 22:33:46,557 | INFO     | ***************************************
[2025-11-22 23:34:31] 2025-11-22 22:33:46,557 | INFO     | 
[2025-11-22 23:34:31] 2025-11-22 22:33:46,558 | INFO     | pilot is running in a VM
[2025-11-22 23:34:31] 2025-11-22 22:33:46,558 | INFO     | architecture information:
[2025-11-22 23:34:31] 2025-11-22 22:33:46,563 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:34:31] 2025-11-22 22:33:46,769 | INFO     | cat /etc/os-release:
[2025-11-22 23:34:31] NAME="CentOS Linux"
[2025-11-22 23:34:31] VERSION="7 (Core)"
[2025-11-22 23:34:31] ID="centos"
[2025-11-22 23:34:31] ID_LIKE="rhel fedora"
[2025-11-22 23:34:31] VERSION_ID="7"
[2025-11-22 23:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:34:31] ANSI_COLOR="0;31"
[2025-11-22 23:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:34:31] HOME_URL="https://www.centos.org/"
[2025-11-22 23:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:34:31] 
[2025-11-22 23:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:34:31] 
[2025-11-22 23:34:31] 2025-11-22 22:33:46,770 | INFO     | ***************************************
[2025-11-22 23:34:31] 2025-11-22 22:33:47,273 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-22 23:34:31] 2025-11-22 22:33:47,386 | INFO     | sufficient remaining disk space (495123955712 B)
[2025-11-22 23:34:31] 2025-11-22 22:33:47,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:34:31] 2025-11-22 22:33:47,387 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:34:31] 2025-11-22 22:33:47,387 | INFO     | update_server=False
[2025-11-22 23:34:31] 2025-11-22 22:33:47,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:34:31] 2025-11-22 22:33:47,659 | INFO     | all data control threads have been joined
[2025-11-22 23:34:31] 2025-11-22 22:33:47,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:34:31] 2025-11-22 22:33:48,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:34:31] 2025-11-22 22:33:48,368 | INFO     | aborting loop
[2025-11-22 23:34:31] 2025-11-22 22:33:48,376 | INFO     | all payload control threads have been joined
[2025-11-22 23:34:31] 2025-11-22 22:33:48,393 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:48,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:34:31] 2025-11-22 22:33:48,455 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:48,624 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:48,666 | INFO     | [data] control thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:48,688 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:48,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:34:31] 2025-11-22 22:33:48,763 | INFO     | all job control threads have been joined
[2025-11-22 23:34:31] 2025-11-22 22:33:49,030 | INFO     | [job] validate thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,056 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,239 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,374 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,382 | INFO     | [payload] control thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,598 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,632 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,698 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,769 | INFO     | [job] control thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:49,799 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:33:52,404 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:34:31] 2025-11-22 22:34:16,869 | INFO     | PID=12970 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:34:31] 2025-11-22 22:34:16,870 | INFO     | .. there are 9 such processes running
[2025-11-22 23:34:31] 2025-11-22 22:34:16,871 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:34:31] 2025-11-22 22:34:16,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:34:31] 2025-11-22 22:34:16,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:34:31] 2025-11-22 22:34:21,357 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:34:31] 2025-11-22 22:34:21,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312234362688)>', '<ExcThread(monitor, started 140311766472448)>']
[2025-11-22 23:34:31] 2025-11-22 22:34:22,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:34:31] 2025-11-22 22:34:22,906 | INFO     | [monitor] control thread has ended
[2025-11-22 23:34:31] 2025-11-22 22:34:26,979 | INFO     | all workflow threads have been joined
[2025-11-22 23:34:31] 2025-11-22 22:34:26,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:34:31] 2025-11-22 22:34:26,979 | INFO     | traces error code: 0
[2025-11-22 23:34:31] 2025-11-22 22:34:26,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:34:31] 2025-11-22 22:34:27,415 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:34:31] 2025-11-22 22:34:27,513 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:34:31] 2025-11-22 22:34:27,609 [wrapper] pilotpid: 12970
[2025-11-22 23:34:31] 2025-11-22 22:34:27,648 [wrapper] Pilot exit status: 0
[2025-11-22 23:34:31] 2025-11-22 22:34:28,069 [wrapper] pandaids: 6891587785
[2025-11-22 23:34:31] 2025-11-22 22:34:28,991 [wrapper] cleanup supervisor_pilot 21680 12971
[2025-11-22 23:34:31] 2025-11-22 22:34:29,057 [wrapper] Test setup, not cleaning
[2025-11-22 23:34:31] 2025-11-22 22:34:29,083 [wrapper] apfmon messages muted
[2025-11-22 23:34:31] 2025-11-22 22:34:29,133 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:34:31] 2025-11-22 22:34:29,158 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:34:31]  *** Error codes and diagnostics ***
[2025-11-22 23:34:31]     "exeErrorCode": 0,
[2025-11-22 23:34:31]     "exeErrorDiag": "",
[2025-11-22 23:34:31]     "pilotErrorCode": 0,
[2025-11-22 23:34:31]     "pilotErrorDiag": "",
[2025-11-22 23:34:31]  *** Listing of results directory ***
[2025-11-22 23:34:31] total 1330976
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-22 23:34:31] -rwx------. 1 boinc boinc     36292 Nov 18 18:35 runpilot2-wrapper.sh
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:35 queuedata.json
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc       100 Nov 21 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:34:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 22:23 run_atlas
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc       105 Nov 21 22:23 job.xml
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc      6392 Nov 21 22:23 init_data.xml
[2025-11-22 23:34:31] -rw-r--r--. 2 boinc boinc 410620233 Nov 21 22:23 EVNT.47493065._000502.pool.root.1
[2025-11-22 23:34:31] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:23 start_atlas.sh
[2025-11-22 23:34:31] drwxrwx--x. 2 boinc boinc        68 Nov 21 22:23 shared
[2025-11-22 23:34:31] -rw-r--r--. 2 boinc boinc    590096 Nov 21 22:23 input.tar.gz
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc         0 Nov 21 22:23 boinc_lockfile
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc      2773 Nov 21 22:23 pandaJob.out
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc    989798 Nov 21 22:23 agis_schedconf.cvmfs.json
[2025-11-22 23:34:31] drwx------. 5 boinc boinc      4096 Nov 21 22:23 pilot3
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc       533 Nov 22 23:05 boinc_task_state.xml
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc 919199234 Nov 22 23:30 HITS.47493068._005015.pool.root.1
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc      1033 Nov 22 23:32 memory_monitor_summary.json
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc   1526164 Nov 22 23:32 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc   2543771 Nov 22 23:32 log.47493068._005015.job.log.tgz.1
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc      8625 Nov 22 23:33 heartbeat.json
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc      8192 Nov 22 23:34 boinc_mmap_file
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc        29 Nov 22 23:34 wrapper_checkpoint.txt
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc        95 Nov 22 23:34 pilot_heartbeat.json
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc      4885 Nov 22 23:34 pilotlog.txt
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc  12050273 Nov 22 23:34 log.47493068._005015.job.log.1
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc       353 Nov 22 23:34 output.list
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc       620 Nov 22 23:34 runtime_log
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc  14612480 Nov 22 23:34 result.tar.gz
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc      8717 Nov 22 23:34 runtime_log.err
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc       662 Nov 22 23:34 JbjKDmpmef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoaFKDmZHf7gm.diag
[2025-11-22 23:34:31] -rw-r--r--. 1 boinc boinc     21474 Nov 22 23:34 stderr.txt
[2025-11-22 23:34:31] HITS file was successfully produced:
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc 919199234 Nov 22 23:30 shared/HITS.pool.root.1
[2025-11-22 23:34:31]  *** Contents of shared directory: ***
[2025-11-22 23:34:31] total 1313524
[2025-11-22 23:34:31] -rw-r--r--. 2 boinc boinc 410620233 Nov 21 22:23 ATLAS.root_0
[2025-11-22 23:34:31] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:23 start_atlas.sh
[2025-11-22 23:34:31] -rw-r--r--. 2 boinc boinc    590096 Nov 21 22:23 input.tar.gz
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc 919199234 Nov 22 23:30 HITS.pool.root.1
[2025-11-22 23:34:31] -rw-------. 1 boinc boinc  14612480 Nov 22 23:34 result.tar.gz
23:34:33 (9227): run_atlas exited; CPU time 336739.039739
23:34:33 (9227): called boinc_finish(0)

</stderr_txt>
]]>

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