Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:37:00 (6517): wrapper (7.7.26015): starting
20:37:00 (6517): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 20:37:00] Arguments: --nthreads 8
[2025-11-21 20:37:00] Threads: 8
[2025-11-21 20:37:00] Checking for CVMFS
[2025-11-21 20:37:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 20:37:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 20:37:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 20:37:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 20:37:01] 2.11.2.0 26010 278471 141036 153141 0 180 19332792 25165824 4147 130560 3 137986932 99.886 73917045 2918 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 20:37:01] CVMFS is ok
[2025-11-21 20:37:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 20:37:01] Checking for apptainer binary...
[2025-11-21 20:37:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 20:37:01] Running /usr/bin/apptainer --version
[2025-11-21 20:37:01] apptainer version 1.3.2-1.el7
[2025-11-21 20:37:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 20:37:02] cg-vwn216.simple-grid.lan
[2025-11-21 20:37:02] apptainer works
[2025-11-21 20:37:02] Set ATHENA_PROC_NUMBER=8
[2025-11-21 20:37:02] Set ATHENA_CORE_NUMBER=8
[2025-11-21 20:37:02] Starting ATLAS job with PandaID=6891572679
[2025-11-21 20:37:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:13:18]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:13:18] 2025-11-22 21:12:33,634 | INFO     | mean y: 2873032.893236074
[2025-11-22 22:13:18] 2025-11-22 21:12:33,635 | INFO     | intersect: -5803780601.342167
[2025-11-22 22:13:18] 2025-11-22 21:12:33,636 | INFO     | chi2: 10.182709114976808
[2025-11-22 22:13:18] 2025-11-22 21:12:33,639 | INFO     | sum of square deviations: 1052821365525.6525
[2025-11-22 22:13:18] 2025-11-22 21:12:33,709 | INFO     | sum of deviations: 4003911090190.635
[2025-11-22 22:13:18] 2025-11-22 21:12:33,710 | INFO     | mean x: 1763799726.3632734
[2025-11-22 22:13:18] 2025-11-22 21:12:33,710 | INFO     | mean y: 2880310.652694611
[2025-11-22 22:13:18] 2025-11-22 21:12:33,710 | INFO     | intersect: -6704902715.516379
[2025-11-22 22:13:18] 2025-11-22 21:12:33,712 | INFO     | chi2: 7.04569020255297
[2025-11-22 22:13:18] 2025-11-22 21:12:33,712 | INFO     | current chi2=7.04569020255297 (change=30.80731146301612 %)
[2025-11-22 22:13:18] 2025-11-22 21:12:33,715 | INFO     | sum of square deviations: 1042349691783.8298
[2025-11-22 22:13:18] 2025-11-22 21:12:33,772 | INFO     | sum of deviations: 4456231806617.963
[2025-11-22 22:13:18] 2025-11-22 21:12:33,773 | INFO     | mean x: 1763799573.8678238
[2025-11-22 22:13:18] 2025-11-22 21:12:33,773 | INFO     | mean y: 2886894.05540721
[2025-11-22 22:13:18] 2025-11-22 21:12:33,773 | INFO     | intersect: -7537672501.244966
[2025-11-22 22:13:18] 2025-11-22 21:12:33,775 | INFO     | chi2: 4.271615724562755
[2025-11-22 22:13:18] 2025-11-22 21:12:33,775 | INFO     | current chi2=4.271615724562755 (change=39.372643392481876 %)
[2025-11-22 22:13:18] 2025-11-22 21:12:33,777 | INFO     | sum of square deviations: 1031947693766.944
[2025-11-22 22:13:18] 2025-11-22 21:12:33,843 | INFO     | sum of deviations: 4698446577659.633
[2025-11-22 22:13:18] 2025-11-22 21:12:33,844 | INFO     | mean x: 1763799421.3724046
[2025-11-22 22:13:18] 2025-11-22 21:12:33,844 | INFO     | mean y: 2890444.3208305426
[2025-11-22 22:13:18] 2025-11-22 21:12:33,844 | INFO     | intersect: -8027669055.0415325
[2025-11-22 22:13:18] 2025-11-22 21:12:33,846 | INFO     | chi2: 3.424291219289045
[2025-11-22 22:13:18] 2025-11-22 21:12:33,846 | INFO     | current chi2=3.424291219289045 (change=19.836159427951422 %)
[2025-11-22 22:13:18] 2025-11-22 21:12:33,846 | INFO     | right removable region: 1492
[2025-11-22 22:13:18] 2025-11-22 21:12:33,848 | INFO     | sum of square deviations: 1052820115635.6532
[2025-11-22 22:13:18] 2025-11-22 21:12:33,913 | INFO     | sum of deviations: 3007378867588.825
[2025-11-22 22:13:18] 2025-11-22 21:12:33,913 | INFO     | mean x: 1763800031.3632734
[2025-11-22 22:13:18] 2025-11-22 21:12:33,913 | INFO     | mean y: 2880166.507651364
[2025-11-22 22:13:18] 2025-11-22 21:12:33,913 | INFO     | intersect: -5035411619.712456
[2025-11-22 22:13:18] 2025-11-22 21:12:33,915 | INFO     | chi2: 7.393500207137536
[2025-11-22 22:13:18] 2025-11-22 21:12:33,915 | INFO     | current chi2=7.393500207137536 (change=27.391619227705142 %)
[2025-11-22 22:13:18] 2025-11-22 21:12:33,917 | INFO     | sum of square deviations: 1042348017402.3961
[2025-11-22 22:13:18] 2025-11-22 21:12:33,976 | INFO     | sum of deviations: 2891423610309.9463
[2025-11-22 22:13:18] 2025-11-22 21:12:33,976 | INFO     | mean x: 1763800183.8618157
[2025-11-22 22:13:18] 2025-11-22 21:12:33,976 | INFO     | mean y: 2881854.661548732
[2025-11-22 22:13:18] 2025-11-22 21:12:33,977 | INFO     | intersect: -4889815603.7136
[2025-11-22 22:13:18] 2025-11-22 21:12:33,978 | INFO     | chi2: 7.307611047875391
[2025-11-22 22:13:18] 2025-11-22 21:12:33,979 | INFO     | current chi2=7.307611047875391 (change=1.1616846805418226 %)
[2025-11-22 22:13:18] 2025-11-22 21:12:33,979 | INFO     | left removable region: 20
[2025-11-22 22:13:18] 2025-11-22 21:12:33,981 | INFO     | sum of square deviations: 989011910512.7445
[2025-11-22 22:13:18] 2025-11-22 21:12:34,037 | INFO     | sum of deviations: 3946050391042.2705
[2025-11-22 22:13:18] 2025-11-22 21:12:34,038 | INFO     | mean x: 1763800000.877038
[2025-11-22 22:13:18] 2025-11-22 21:12:34,038 | INFO     | mean y: 2902399.8688858696
[2025-11-22 22:13:18] 2025-11-22 21:12:34,038 | INFO     | intersect: -7034468545.009644
[2025-11-22 22:13:18] 2025-11-22 21:12:34,040 | INFO     | chi2: 0.40291663732880095
[2025-11-22 22:13:18] 2025-11-22 21:12:34,040 | INFO     | current memory leak: 3.99 B/s (using 1472 data points, chi2=0.40)
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | ..............................
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | . Timing measurements:
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | . get job = 0 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | . initial setup = 2 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | . payload setup = 15 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | . stage-in = 0 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | . payload execution = 91958 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,043 | INFO     | . stage-out = 7 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,044 | INFO     | . log creation = 1 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,044 | INFO     | ..............................
[2025-11-22 22:13:18] 2025-11-22 21:12:34,188 | INFO     | 
[2025-11-22 22:13:18] 2025-11-22 21:12:34,188 | INFO     | job summary report
[2025-11-22 22:13:18] 2025-11-22 21:12:34,188 | INFO     | --------------------------------------------------
[2025-11-22 22:13:18] 2025-11-22 21:12:34,188 | INFO     | PanDA job id: 6891572679
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | task id: 47493068
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | errors: (none)
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | pilot state: finished 
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | transexitcode: 0
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | exeerrorcode: 0
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | exeerrordiag: 
[2025-11-22 22:13:18] 2025-11-22 21:12:34,189 | INFO     | exitcode: 0
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | exitmsg: OK
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | cpuconsumptiontime: 344330 s
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | nevents: 1000
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | neventsw: 0
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | pid: 16829
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | pgrp: 16829
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | corecount: 8
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | event service: False
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | sizes: {0: 2298626, 1: 2298825, 10: 2299087, 12: 2299115, 91978: 2363353, 91986: 2372349, 91988: 2372533, 92084: 2372779}
[2025-11-22 22:13:18] 2025-11-22 21:12:34,190 | INFO     | --------------------------------------------------
[2025-11-22 22:13:18] 2025-11-22 21:12:34,191 | INFO     | 
[2025-11-22 22:13:18] 2025-11-22 21:12:34,191 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-11-22 22:13:18] 2025-11-22 21:12:34,211 | INFO     | time since job start (92109s) is within the limit (172800.0s)
[2025-11-22 22:13:18] 2025-11-22 21:12:34,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:13:18] 2025-11-22 21:12:34,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:13:18] 2025-11-22 21:12:34,780 | INFO     | job 6891572679 has completed (purged errors)
[2025-11-22 22:13:18] 2025-11-22 21:12:34,780 | INFO     | overall cleanup function is called
[2025-11-22 22:13:18] 2025-11-22 21:12:35,353 | INFO     | PID=10274 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:13:18] 2025-11-22 21:12:35,353 | INFO     | .. there are 9 such processes running
[2025-11-22 22:13:18] 2025-11-22 21:12:35,804 | INFO     | --- collectZombieJob: --- 10, [16829]
[2025-11-22 22:13:18] 2025-11-22 21:12:35,805 | INFO     | zombie collector waiting for pid 16829
[2025-11-22 22:13:18] 2025-11-22 21:12:35,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:13:18] 2025-11-22 21:12:35,805 | INFO     | collected zombie processes
[2025-11-22 22:13:18] 2025-11-22 21:12:35,805 | INFO     | will attempt to kill all subprocesses of pid=16829
[2025-11-22 22:13:18] 2025-11-22 21:12:35,937 | INFO     | process IDs to be killed: [16829] (in reverse order)
[2025-11-22 22:13:18] 2025-11-22 21:12:37,022 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:13:18] 2025-11-22 21:12:37,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:13:18] 2025-11-22 21:12:37,026 | INFO     | did not find any defunct processes belonging to 16829
[2025-11-22 22:13:18] 2025-11-22 21:12:37,029 | INFO     | did not find any defunct processes belonging to 16829
[2025-11-22 22:13:18] 2025-11-22 21:12:37,068 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:13:18] 2025-11-22 21:12:37,068 | INFO     | ready for new job
[2025-11-22 22:13:18] 2025-11-22 21:12:37,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:13:18] 2025-11-22 21:12:37,075 | INFO     | ***************************************
[2025-11-22 22:13:18] 2025-11-22 21:12:37,075 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:13:18] 2025-11-22 21:12:37,075 | INFO     | ***************************************
[2025-11-22 22:13:18] 2025-11-22 21:12:37,075 | INFO     | 
[2025-11-22 22:13:18] 2025-11-22 21:12:37,076 | INFO     | pilot is running in a VM
[2025-11-22 22:13:18] 2025-11-22 21:12:37,076 | INFO     | architecture information:
[2025-11-22 22:13:18] 2025-11-22 21:12:37,088 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:13:18] 2025-11-22 21:12:37,375 | INFO     | cat /etc/os-release:
[2025-11-22 22:13:18] NAME="CentOS Linux"
[2025-11-22 22:13:18] VERSION="7 (Core)"
[2025-11-22 22:13:18] ID="centos"
[2025-11-22 22:13:18] ID_LIKE="rhel fedora"
[2025-11-22 22:13:18] VERSION_ID="7"
[2025-11-22 22:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:13:18] ANSI_COLOR="0;31"
[2025-11-22 22:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:13:18] HOME_URL="https://www.centos.org/"
[2025-11-22 22:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:13:18] 
[2025-11-22 22:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:13:18] 
[2025-11-22 22:13:18] 2025-11-22 21:12:37,375 | INFO     | ***************************************
[2025-11-22 22:13:18] 2025-11-22 21:12:37,879 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-11-22 22:13:18] 2025-11-22 21:12:38,111 | INFO     | sufficient remaining disk space (495083061248 B)
[2025-11-22 22:13:18] 2025-11-22 21:12:38,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:13:18] 2025-11-22 21:12:38,112 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:13:18] 2025-11-22 21:12:38,112 | INFO     | update_server=False
[2025-11-22 22:13:18] 2025-11-22 21:12:38,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:13:18] 2025-11-22 21:12:38,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:13:18] 2025-11-22 21:12:38,551 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 22:13:18] 2025-11-22 21:12:38,552 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 22:13:18] 2025-11-22 21:12:38,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:13:18] 2025-11-22 21:12:38,552 | INFO     | will abort loop
[2025-11-22 22:13:18] 2025-11-22 21:12:38,573 | INFO     | all data control threads have been joined
[2025-11-22 22:13:18] 2025-11-22 21:12:39,085 | INFO     | all payload control threads have been joined
[2025-11-22 22:13:18] 2025-11-22 21:12:39,119 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,138 | INFO     | all job control threads have been joined
[2025-11-22 22:13:18] 2025-11-22 21:12:39,184 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:13:18] 2025-11-22 21:12:39,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:13:18] 2025-11-22 21:12:39,340 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,559 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,579 | INFO     | [data] control thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,665 | INFO     | [job] validate thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,699 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,770 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:39,958 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:40,053 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:40,091 | INFO     | [payload] control thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:40,121 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:40,145 | INFO     | [job] control thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:40,211 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:40,469 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:12:43,211 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:13:18] 2025-11-22 21:13:06,210 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:13:18] 2025-11-22 21:13:07,785 | INFO     | PID=10274 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:13:18] 2025-11-22 21:13:07,786 | INFO     | .. there are 9 such processes running
[2025-11-22 22:13:18] 2025-11-22 21:13:07,787 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:13:18] 2025-11-22 21:13:07,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:13:18] 2025-11-22 21:13:07,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:13:18] 2025-11-22 21:13:08,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140100238628672)>', '<ExcThread(monitor, started 140099769571072)>']
[2025-11-22 22:13:18] 2025-11-22 21:13:08,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:13:18] 2025-11-22 21:13:08,794 | INFO     | [monitor] control thread has ended
[2025-11-22 22:13:18] 2025-11-22 21:13:13,238 | INFO     | all workflow threads have been joined
[2025-11-22 22:13:18] 2025-11-22 21:13:13,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:13:18] 2025-11-22 21:13:13,239 | INFO     | traces error code: 0
[2025-11-22 22:13:18] 2025-11-22 21:13:13,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:13:18] 2025-11-22 21:13:13,923 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:13:18] 2025-11-22 21:13:13,974 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:13:18] 2025-11-22 21:13:14,069 [wrapper] pilotpid: 10274
[2025-11-22 22:13:18] 2025-11-22 21:13:14,174 [wrapper] Pilot exit status: 0
[2025-11-22 22:13:18] 2025-11-22 21:13:14,652 [wrapper] pandaids: 6891572679
[2025-11-22 22:13:18] 2025-11-22 21:13:15,707 [wrapper] cleanup supervisor_pilot 23848 10275
[2025-11-22 22:13:18] 2025-11-22 21:13:15,746 [wrapper] Test setup, not cleaning
[2025-11-22 22:13:18] 2025-11-22 21:13:15,775 [wrapper] apfmon messages muted
[2025-11-22 22:13:18] 2025-11-22 21:13:15,810 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:13:18] 2025-11-22 21:13:15,841 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:13:18]  *** Error codes and diagnostics ***
[2025-11-22 22:13:18]     "exeErrorCode": 0,
[2025-11-22 22:13:18]     "exeErrorDiag": "",
[2025-11-22 22:13:18]     "pilotErrorCode": 0,
[2025-11-22 22:13:18]     "pilotErrorDiag": "",
[2025-11-22 22:13:18]  *** Listing of results directory ***
[2025-11-22 22:13:18] total 1333052
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:24 pilot3.tar.gz
[2025-11-22 22:13:18] -rwx------. 1 boinc boinc     36292 Nov 18 17:26 runpilot2-wrapper.sh
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:26 queuedata.json
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc       100 Nov 21 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:13:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 20:36 run_atlas
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc       105 Nov 21 20:36 job.xml
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc      6390 Nov 21 20:37 init_data.xml
[2025-11-22 22:13:18] -rw-r--r--. 2 boinc boinc 410230132 Nov 21 20:37 EVNT.47493065._000346.pool.root.1
[2025-11-22 22:13:18] -rw-r--r--. 2 boinc boinc     15120 Nov 21 20:37 start_atlas.sh
[2025-11-22 22:13:18] drwxrwx--x. 2 boinc boinc        68 Nov 21 20:37 shared
[2025-11-22 22:13:18] -rw-r--r--. 2 boinc boinc    590096 Nov 21 20:37 input.tar.gz
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc         0 Nov 21 20:37 boinc_lockfile
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc      2773 Nov 21 20:37 pandaJob.out
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc    989798 Nov 21 20:37 agis_schedconf.cvmfs.json
[2025-11-22 22:13:18] drwx------. 5 boinc boinc      4096 Nov 21 20:37 pilot3
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc       533 Nov 22 21:51 boinc_task_state.xml
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc 921290623 Nov 22 22:09 HITS.47493068._003460.pool.root.1
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc      1033 Nov 22 22:10 memory_monitor_summary.json
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc   1526164 Nov 22 22:10 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc   2563149 Nov 22 22:10 log.47493068._003460.job.log.tgz.1
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc      8637 Nov 22 22:12 heartbeat.json
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc      8192 Nov 22 22:12 boinc_mmap_file
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc        29 Nov 22 22:12 wrapper_checkpoint.txt
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc        95 Nov 22 22:13 pilot_heartbeat.json
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc      5071 Nov 22 22:13 pilotlog.txt
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc  12249625 Nov 22 22:13 log.47493068._003460.job.log.1
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc       353 Nov 22 22:13 output.list
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc       620 Nov 22 22:13 runtime_log
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc  14837760 Nov 22 22:13 result.tar.gz
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc      8717 Nov 22 22:13 runtime_log.err
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc       662 Nov 22 22:13 N4INDmIidf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDnFKDmxmOHNn.diag
[2025-11-22 22:13:18] -rw-r--r--. 1 boinc boinc      6042 Nov 22 22:13 stderr.txt
[2025-11-22 22:13:18] HITS file was successfully produced:
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc 921290623 Nov 22 22:09 shared/HITS.pool.root.1
[2025-11-22 22:13:18]  *** Contents of shared directory: ***
[2025-11-22 22:13:18] total 1315404
[2025-11-22 22:13:18] -rw-r--r--. 2 boinc boinc 410230132 Nov 21 20:37 ATLAS.root_0
[2025-11-22 22:13:18] -rw-r--r--. 2 boinc boinc     15120 Nov 21 20:37 start_atlas.sh
[2025-11-22 22:13:18] -rw-r--r--. 2 boinc boinc    590096 Nov 21 20:37 input.tar.gz
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc 921290623 Nov 22 22:09 HITS.pool.root.1
[2025-11-22 22:13:18] -rw-------. 1 boinc boinc  14837760 Nov 22 22:13 result.tar.gz
22:13:20 (6517): run_atlas exited; CPU time 344814.710386
22:13:20 (6517): called boinc_finish(0)

</stderr_txt>
]]>

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