Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:17 (3094250): wrapper (7.7.26015): starting
11:07:17 (3094250): wrapper: running run_atlas (--nthreads 2)
[2025-11-22 11:07:17] Arguments: --nthreads 2
[2025-11-22 11:07:17] Threads: 2
[2025-11-22 11:07:17] Checking for CVMFS
[2025-11-22 11:07:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 11:07:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 11:07:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 11:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 11:07:17] 2.9.2.0 3000266 758 49720 153166 2 81 35092253 36864000 0 130560 0 243759 99.981 27614 22091 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-22 11:07:17] CVMFS is ok
[2025-11-22 11:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 11:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 11:07:17] Further information can be found at the LHC@home message board.
[2025-11-22 11:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 11:07:17] Checking for apptainer binary...
[2025-11-22 11:07:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 11:07:18] Running /usr/bin/apptainer --version
[2025-11-22 11:07:18] apptainer version 1.4.1-1.1
[2025-11-22 11:07:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 11:07:18] thA310
[2025-11-22 11:07:18] apptainer works
[2025-11-22 11:07:18] Set ATHENA_PROC_NUMBER=2
[2025-11-22 11:07:18] Set ATHENA_CORE_NUMBER=2
[2025-11-22 11:07:18] Starting ATLAS job with PandaID=6891571122
[2025-11-22 11:07:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:28:41]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:28:41] 2025-11-22 22:28:07,058 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:07,058 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:07,066 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:07,191 | INFO     | all payload control threads have been joined
[2025-11-22 23:28:41] 2025-11-22 22:28:07,586 | INFO     | [data] control thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:07,602 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:07,613 | INFO     | all job control threads have been joined
[2025-11-22 23:28:41] 2025-11-22 22:28:07,987 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:07,987 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:08,058 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:08,085 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:08,125 | INFO     | [job] validate thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:08,180 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:08,197 | INFO     | [payload] control thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:08,619 | INFO     | [job] control thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:09,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:28:41] 2025-11-22 22:28:13,090 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:16,751 | INFO     | job.realtimelogging is not enabled
[2025-11-22 23:28:41] 2025-11-22 22:28:17,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:28:41] 2025-11-22 22:28:34,619 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:28:41] 2025-11-22 22:28:36,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040118581056)>', '<ExcThread(monitor, started 140039321270016)>']
[2025-11-22 23:28:41] 2025-11-22 22:28:37,058 | INFO     | PID=3097961 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 23:28:41] 2025-11-22 22:28:37,058 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:28:41] 2025-11-22 22:28:37,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:28:41] 2025-11-22 22:28:37,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:28:41] 2025-11-22 22:28:37,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:28:41] 2025-11-22 22:28:37,058 | INFO     | [monitor] control thread has ended
[2025-11-22 23:28:41] 2025-11-22 22:28:41,671 | INFO     | all workflow threads have been joined
[2025-11-22 23:28:41] 2025-11-22 22:28:41,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:28:41] 2025-11-22 22:28:41,672 | INFO     | traces error code: 0
[2025-11-22 23:28:41] 2025-11-22 22:28:41,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:28:41] 2025-11-22 22:28:41,747 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:28:41] 2025-11-22 22:28:41,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:28:41] 2025-11-22 22:28:41,752 [wrapper] pilotpid: 3097961
[2025-11-22 23:28:41] 2025-11-22 22:28:41,755 [wrapper] Pilot exit status: 0
[2025-11-22 23:28:41] 2025-11-22 22:28:41,761 [wrapper] pandaids: 6891571122
[2025-11-22 23:28:41] 2025-11-22 22:28:41,774 [wrapper] cleanup supervisor_pilot 3183203 3097962
[2025-11-22 23:28:41] 2025-11-22 22:28:41,776 [wrapper] Test setup, not cleaning
[2025-11-22 23:28:41] 2025-11-22 22:28:41,778 [wrapper] apfmon messages muted
[2025-11-22 23:28:41] 2025-11-22 22:28:41,780 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:28:41] 2025-11-22 22:28:41,782 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:28:41]  *** Error codes and diagnostics ***
[2025-11-22 23:28:41]     "exeErrorCode": 0,
[2025-11-22 23:28:41]     "exeErrorDiag": "",
[2025-11-22 23:28:41]     "pilotErrorCode": 0,
[2025-11-22 23:28:41]     "pilotErrorDiag": "",
[2025-11-22 23:28:41]  *** Listing of results directory ***
[2025-11-22 23:28:41] total 1312064
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:39 queuedata.json
[2025-11-22 23:28:41] -rwx------ 1 boinc boinc     36292 Nov 18 16:41 runpilot2-wrapper.sh
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc       100 Nov 22 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:28:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 11:07 run_atlas
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc       105 Nov 22 11:07 job.xml
[2025-11-22 23:28:41] -rw-r--r-- 2 boinc boinc 409733417 Nov 22 11:07 EVNT.47493065._000266.pool.root.1
[2025-11-22 23:28:41] drwxrwx--x 2 boinc boinc      4096 Nov 22 11:07 shared
[2025-11-22 23:28:41] -rw-r--r-- 2 boinc boinc    590101 Nov 22 11:07 input.tar.gz
[2025-11-22 23:28:41] -rw-r--r-- 2 boinc boinc     15120 Nov 22 11:07 start_atlas.sh
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc         0 Nov 22 11:07 boinc_setup_complete
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc      6205 Nov 22 11:07 init_data.xml
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc         0 Nov 22 11:07 boinc_lockfile
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc      2772 Nov 22 11:07 pandaJob.out
[2025-11-22 23:28:41] -rw------- 1 boinc boinc    989768 Nov 22 11:07 agis_schedconf.cvmfs.json
[2025-11-22 23:28:41] drwx------ 5 boinc boinc      4096 Nov 22 11:07 pilot3
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc       531 Nov 22 23:24 boinc_task_state.xml
[2025-11-22 23:28:41] -rw------- 1 boinc boinc 915003917 Nov 22 23:27 HITS.47493068._002658.pool.root.1
[2025-11-22 23:28:41] -rw------- 1 boinc boinc      1026 Nov 22 23:27 memory_monitor_summary.json
[2025-11-22 23:28:41] -rw------- 1 boinc boinc   1526164 Nov 22 23:27 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:28:41] -rw------- 1 boinc boinc   1222164 Nov 22 23:27 log.47493068._002658.job.log.tgz.1
[2025-11-22 23:28:41] -rw------- 1 boinc boinc      8559 Nov 22 23:28 heartbeat.json
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc      8192 Nov 22 23:28 boinc_mmap_file
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc        28 Nov 22 23:28 wrapper_checkpoint.txt
[2025-11-22 23:28:41] -rw------- 1 boinc boinc        95 Nov 22 23:28 pilot_heartbeat.json
[2025-11-22 23:28:41] -rw------- 1 boinc boinc      4824 Nov 22 23:28 pilotlog.txt
[2025-11-22 23:28:41] -rw------- 1 boinc boinc   6230282 Nov 22 23:28 log.47493068._002658.job.log.1
[2025-11-22 23:28:41] -rw------- 1 boinc boinc       353 Nov 22 23:28 output.list
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc       620 Nov 22 23:28 runtime_log
[2025-11-22 23:28:41] -rw------- 1 boinc boinc   7475200 Nov 22 23:28 result.tar.gz
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc      8778 Nov 22 23:28 runtime_log.err
[2025-11-22 23:28:41] -rw------- 1 boinc boinc       665 Nov 22 23:28 878NDmh0cf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4dFKDmloC6Nn.diag
[2025-11-22 23:28:41] -rw-r--r-- 1 boinc boinc      6634 Nov 22 23:28 stderr.txt
[2025-11-22 23:28:41] HITS file was successfully produced:
[2025-11-22 23:28:41] -rw------- 1 boinc boinc 915003917 Nov 22 23:27 shared/HITS.pool.root.1
[2025-11-22 23:28:41]  *** Contents of shared directory: ***
[2025-11-22 23:28:41] total 1301596
[2025-11-22 23:28:41] -rw-r--r-- 2 boinc boinc 409733417 Nov 22 11:07 ATLAS.root_0
[2025-11-22 23:28:41] -rw-r--r-- 2 boinc boinc    590101 Nov 22 11:07 input.tar.gz
[2025-11-22 23:28:41] -rw-r--r-- 2 boinc boinc     15120 Nov 22 11:07 start_atlas.sh
[2025-11-22 23:28:41] -rw------- 1 boinc boinc 915003917 Nov 22 23:27 HITS.pool.root.1
[2025-11-22 23:28:41] -rw------- 1 boinc boinc   7475200 Nov 22 23:28 result.tar.gz
23:28:43 (3094250): run_atlas exited; CPU time 88126.651892
23:28:43 (3094250): called boinc_finish(0)

</stderr_txt>
]]>

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