Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:10:30 (773686): wrapper (7.7.26015): starting
11:10:30 (773686): wrapper: running run_atlas (--nthreads 2)
[2025-11-20 11:10:30] Arguments: --nthreads 2
[2025-11-20 11:10:30] Threads: 2
[2025-11-20 11:10:30] Checking for CVMFS
[2025-11-20 11:10:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 11:10:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 11:10:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 11:10:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 11:10:30] 2.9.2.0 442946 2677 57976 153076 3 81 36087527 36864001 0 130560 0 887567 99.260 598996 2678 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 11:10:30] CVMFS is ok
[2025-11-20 11:10:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 11:10:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 11:10:30] Further information can be found at the LHC@home message board.
[2025-11-20 11:10:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 11:10:30] Checking for apptainer binary...
[2025-11-20 11:10:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 11:10:30] Running /usr/bin/apptainer --version
[2025-11-20 11:10:30] apptainer version 1.4.1-1.1
[2025-11-20 11:10:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 11:10:30] thA354a
[2025-11-20 11:10:30] apptainer works
[2025-11-20 11:10:31] Set ATHENA_PROC_NUMBER=2
[2025-11-20 11:10:31] Set ATHENA_CORE_NUMBER=2
[2025-11-20 11:10:31] Starting ATLAS job with PandaID=6891565256
[2025-11-20 11:10:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:28:51]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:28:51] 2025-11-20 22:27:45,214 | INFO     | time since job start (44221s) is within the limit (172800.0s)
[2025-11-20 23:28:51] 2025-11-20 22:27:45,789 | INFO     | monitor loop #3375: job 0:6891565256 is in state 'finished'
[2025-11-20 23:28:51] 2025-11-20 22:27:45,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,409 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 23:28:51] 2025-11-20 22:27:46,410 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3400.59
[2025-11-20 23:28:51] 2025-11-20 22:27:46,411 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891565256/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,411 | INFO     | extracted standard info from prmon json
[2025-11-20 23:28:51] 2025-11-20 22:27:46,411 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:28:51] 2025-11-20 22:27:46,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:28:51] 2025-11-20 22:27:46,416 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:28:51] 2025-11-20 22:27:46,416 | INFO     | sum of square deviations: 118165750450.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,420 | INFO     | sum of deviations: 512329092074.9996
[2025-11-20 23:28:51] 2025-11-20 22:27:46,420 | INFO     | mean x: 1763655555.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,420 | INFO     | mean y: 2029625.7751724138
[2025-11-20 23:28:51] 2025-11-20 22:27:46,420 | INFO     | intersect: -7644619642.605786
[2025-11-20 23:28:51] 2025-11-20 22:27:46,420 | INFO     | chi2: 3.7371520556057964
[2025-11-20 23:28:51] 2025-11-20 22:27:46,421 | INFO     | sum of square deviations: 115737760740.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,425 | INFO     | sum of deviations: 610855611772.5001
[2025-11-20 23:28:51] 2025-11-20 22:27:46,425 | INFO     | mean x: 1763655402.5
[2025-11-20 23:28:51] 2025-11-20 22:27:46,425 | INFO     | mean y: 2035796.2347222222
[2025-11-20 23:28:51] 2025-11-20 22:27:46,425 | INFO     | intersect: -9306411100.972912
[2025-11-20 23:28:51] 2025-11-20 22:27:46,425 | INFO     | chi2: 2.0933570168235653
[2025-11-20 23:28:51] 2025-11-20 22:27:46,425 | INFO     | current chi2=2.0933570168235653 (change=43.98523298821916 %)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,426 | INFO     | sum of square deviations: 113343260030.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | sum of deviations: 601623974099.9999
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | mean x: 1763655250.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | mean y: 2035208.353846154
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | intersect: -9359414957.862349
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | chi2: 2.092957848303739
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | current chi2=2.092957848303739 (change=0.0190683441294714 %)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | right removable region: 714
[2025-11-20 23:28:51] 2025-11-20 22:27:46,430 | INFO     | sum of square deviations: 115737760740.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,435 | INFO     | sum of deviations: 381254246362.50006
[2025-11-20 23:28:51] 2025-11-20 22:27:46,435 | INFO     | mean x: 1763655707.5
[2025-11-20 23:28:51] 2025-11-20 22:27:46,435 | INFO     | mean y: 2037849.0402777777
[2025-11-20 23:28:51] 2025-11-20 22:27:46,435 | INFO     | intersect: -5807658340.921056
[2025-11-20 23:28:51] 2025-11-20 22:27:46,435 | INFO     | chi2: 1.8859878986205965
[2025-11-20 23:28:51] 2025-11-20 22:27:46,435 | INFO     | current chi2=1.8859878986205965 (change=49.53408717230063 %)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,435 | INFO     | sum of square deviations: 113343260030.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,439 | INFO     | sum of deviations: 349870291123.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,439 | INFO     | mean x: 1763655860.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,440 | INFO     | mean y: 2039841.2265734265
[2025-11-20 23:28:51] 2025-11-20 22:27:46,440 | INFO     | intersect: -5442049106.062063
[2025-11-20 23:28:51] 2025-11-20 22:27:46,440 | INFO     | chi2: 1.7170777586097907
[2025-11-20 23:28:51] 2025-11-20 22:27:46,440 | INFO     | current chi2=1.7170777586097907 (change=8.956056406000585 %)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,440 | INFO     | left removable region: 20
[2025-11-20 23:28:51] 2025-11-20 22:27:46,440 | INFO     | sum of square deviations: 103646808457.5
[2025-11-20 23:28:51] 2025-11-20 22:27:46,444 | INFO     | sum of deviations: 408891586055.0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,444 | INFO     | mean x: 1763655829.5
[2025-11-20 23:28:51] 2025-11-20 22:27:46,444 | INFO     | mean y: 2047545.4207492794
[2025-11-20 23:28:51] 2025-11-20 22:27:46,444 | INFO     | intersect: -6955658534.599111
[2025-11-20 23:28:51] 2025-11-20 22:27:46,444 | INFO     | chi2: 0.052552343486063274
[2025-11-20 23:28:51] 2025-11-20 22:27:46,444 | INFO     | current memory leak: 3.95 B/s (using 694 data points, chi2=0.05)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | could have reported an average CPU frequency of 4545 MHz (28 samples)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | ..............................
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . Timing measurements:
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . get job = 0 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . initial setup = 1 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . payload setup = 7 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . stage-in = 0 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . payload execution = 44180 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . stage-out = 0 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | . log creation = 0 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,445 | INFO     | ..............................
[2025-11-20 23:28:51] 2025-11-20 22:27:46,904 | INFO     | 
[2025-11-20 23:28:51] 2025-11-20 22:27:46,904 | INFO     | job summary report
[2025-11-20 23:28:51] 2025-11-20 22:27:46,904 | INFO     | --------------------------------------------------
[2025-11-20 23:28:51] 2025-11-20 22:27:46,904 | INFO     | PanDA job id: 6891565256
[2025-11-20 23:28:51] 2025-11-20 22:27:46,905 | INFO     | task id: 47493068
[2025-11-20 23:28:51] 2025-11-20 22:27:46,905 | INFO     | errors: (none)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:28:51] 2025-11-20 22:27:46,905 | INFO     | pilot state: finished 
[2025-11-20 23:28:51] 2025-11-20 22:27:46,905 | INFO     | transexitcode: 0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,905 | INFO     | exeerrorcode: 0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,906 | INFO     | exeerrordiag: 
[2025-11-20 23:28:51] 2025-11-20 22:27:46,906 | INFO     | exitcode: 0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,906 | INFO     | exitmsg: OK
[2025-11-20 23:28:51] 2025-11-20 22:27:46,906 | INFO     | cpuconsumptiontime: 87466 s
[2025-11-20 23:28:51] 2025-11-20 22:27:46,906 | INFO     | nevents: 1000
[2025-11-20 23:28:51] 2025-11-20 22:27:46,906 | INFO     | neventsw: 0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,906 | INFO     | pid: 783812
[2025-11-20 23:28:51] 2025-11-20 22:27:46,907 | INFO     | pgrp: 783812
[2025-11-20 23:28:51] 2025-11-20 22:27:46,907 | INFO     | corecount: 2
[2025-11-20 23:28:51] 2025-11-20 22:27:46,907 | INFO     | event service: False
[2025-11-20 23:28:51] 2025-11-20 22:27:46,907 | INFO     | sizes: {0: 2297203, 7: 2297465, 10: 2297493, 44192: 2343615, 44193: 2354211, 44197: 2354267, 44204: 2354641}
[2025-11-20 23:28:51] 2025-11-20 22:27:46,907 | INFO     | --------------------------------------------------
[2025-11-20 23:28:51] 2025-11-20 22:27:46,907 | INFO     | 
[2025-11-20 23:28:51] 2025-11-20 22:27:46,908 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-20 23:28:51] 2025-11-20 22:27:46,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | job 6891565256 has completed (purged errors)
[2025-11-20 23:28:51] 2025-11-20 22:27:46,920 | INFO     | overall cleanup function is called
[2025-11-20 23:28:51] 2025-11-20 22:27:47,928 | INFO     | --- collectZombieJob: --- 10, [783812]
[2025-11-20 23:28:51] 2025-11-20 22:27:47,928 | INFO     | zombie collector waiting for pid 783812
[2025-11-20 23:28:51] 2025-11-20 22:27:47,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:28:51] 2025-11-20 22:27:47,929 | INFO     | collected zombie processes
[2025-11-20 23:28:51] 2025-11-20 22:27:47,929 | INFO     | will attempt to kill all subprocesses of pid=783812
[2025-11-20 23:28:51] 2025-11-20 22:27:47,966 | INFO     | process IDs to be killed: [783812] (in reverse order)
[2025-11-20 23:28:51] 2025-11-20 22:27:47,988 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:28:51] 2025-11-20 22:27:47,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:28:51] 2025-11-20 22:27:47,989 | INFO     | did not find any defunct processes belonging to 783812
[2025-11-20 23:28:51] 2025-11-20 22:27:47,990 | INFO     | did not find any defunct processes belonging to 783812
[2025-11-20 23:28:51] 2025-11-20 22:27:47,990 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:28:51] 2025-11-20 22:27:47,990 | INFO     | ready for new job
[2025-11-20 23:28:51] 2025-11-20 22:27:47,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:28:51] 2025-11-20 22:27:47,991 | INFO     | ***************************************
[2025-11-20 23:28:51] 2025-11-20 22:27:47,991 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:28:51] 2025-11-20 22:27:47,991 | INFO     | ***************************************
[2025-11-20 23:28:51] 2025-11-20 22:27:47,992 | INFO     | 
[2025-11-20 23:28:51] 2025-11-20 22:27:47,992 | INFO     | architecture information:
[2025-11-20 23:28:51] 2025-11-20 22:27:47,992 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:28:51] 2025-11-20 22:27:48,000 | INFO     | cat /etc/os-release:
[2025-11-20 23:28:51] NAME="CentOS Linux"
[2025-11-20 23:28:51] VERSION="7 (Core)"
[2025-11-20 23:28:51] ID="centos"
[2025-11-20 23:28:51] ID_LIKE="rhel fedora"
[2025-11-20 23:28:51] VERSION_ID="7"
[2025-11-20 23:28:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:28:51] ANSI_COLOR="0;31"
[2025-11-20 23:28:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:28:51] HOME_URL="https://www.centos.org/"
[2025-11-20 23:28:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:28:51] 
[2025-11-20 23:28:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:28:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:28:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:28:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:28:51] 
[2025-11-20 23:28:51] 2025-11-20 22:27:48,000 | INFO     | ***************************************
[2025-11-20 23:28:51] 2025-11-20 22:27:48,503 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-20 23:28:51] 2025-11-20 22:27:48,518 | INFO     | sufficient remaining disk space (188619948032 B)
[2025-11-20 23:28:51] 2025-11-20 22:27:48,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:28:51] 2025-11-20 22:27:48,518 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:28:51] 2025-11-20 22:27:48,519 | INFO     | update_server=False
[2025-11-20 23:28:51] 2025-11-20 22:27:48,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:28:51] 2025-11-20 22:27:48,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:28:51] 2025-11-20 22:27:48,692 | INFO     | all data control threads have been joined
[2025-11-20 23:28:51] 2025-11-20 22:27:49,055 | INFO     | all job control threads have been joined
[2025-11-20 23:28:51] 2025-11-20 22:27:49,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:28:51] 2025-11-20 22:27:49,297 | INFO     | aborting loop
[2025-11-20 23:28:51] 2025-11-20 22:27:49,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:28:51] 2025-11-20 22:27:49,525 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:49,697 | INFO     | all payload control threads have been joined
[2025-11-20 23:28:51] 2025-11-20 22:27:49,698 | INFO     | [data] control thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:49,713 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:49,897 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,061 | INFO     | [job] control thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,302 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,456 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,480 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,549 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,583 | INFO     | [job] validate thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,701 | INFO     | [payload] control thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:50,776 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:51,091 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:51,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:28:51] 2025-11-20 22:27:52,492 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:53,372 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:27:59,542 | INFO     | job.realtimelogging is not enabled
[2025-11-20 23:28:51] 2025-11-20 22:28:00,548 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:28:51] 2025-11-20 22:28:18,318 | INFO     | PID=777390 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 23:28:51] 2025-11-20 22:28:18,318 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:28:51] 2025-11-20 22:28:18,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:28:51] 2025-11-20 22:28:18,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:28:51] 2025-11-20 22:28:44,973 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:28:51] 2025-11-20 22:28:46,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140167500330816)>', '<ExcThread(monitor, started 140166761002752)>']
[2025-11-20 23:28:51] 2025-11-20 22:28:46,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:28:51] 2025-11-20 22:28:46,463 | INFO     | [monitor] control thread has ended
[2025-11-20 23:28:51] 2025-11-20 22:28:51,229 | INFO     | all workflow threads have been joined
[2025-11-20 23:28:51] 2025-11-20 22:28:51,230 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:28:51] 2025-11-20 22:28:51,230 | INFO     | traces error code: 0
[2025-11-20 23:28:51] 2025-11-20 22:28:51,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:28:51] 2025-11-20 22:28:51,273 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:28:51] 2025-11-20 22:28:51,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:28:51] 2025-11-20 22:28:51,279 [wrapper] pilotpid: 777390
[2025-11-20 23:28:51] 2025-11-20 22:28:51,281 [wrapper] Pilot exit status: 0
[2025-11-20 23:28:51] 2025-11-20 22:28:51,286 [wrapper] pandaids: 6891565256
[2025-11-20 23:28:51] 2025-11-20 22:28:51,302 [wrapper] cleanup supervisor_pilot  861333 777391
[2025-11-20 23:28:51] 2025-11-20 22:28:51,304 [wrapper] Test setup, not cleaning
[2025-11-20 23:28:51] 2025-11-20 22:28:51,306 [wrapper] apfmon messages muted
[2025-11-20 23:28:51] 2025-11-20 22:28:51,308 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:28:51] 2025-11-20 22:28:51,310 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:28:51]  *** Error codes and diagnostics ***
[2025-11-20 23:28:51]     "exeErrorCode": 0,
[2025-11-20 23:28:51]     "exeErrorDiag": "",
[2025-11-20 23:28:51]     "pilotErrorCode": 0,
[2025-11-20 23:28:51]     "pilotErrorDiag": "",
[2025-11-20 23:28:51]  *** Listing of results directory ***
[2025-11-20 23:28:51] total 1325056
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:29 queuedata.json
[2025-11-20 23:28:51] -rwx------ 1 boinc boinc     36292 Nov 18 16:30 runpilot2-wrapper.sh
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc       100 Nov 20 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:28:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 11:10 run_atlas
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc       105 Nov 20 11:10 job.xml
[2025-11-20 23:28:51] -rw-r--r-- 2 boinc boinc 410687051 Nov 20 11:10 EVNT.47493065._000141.pool.root.1
[2025-11-20 23:28:51] -rw-r--r-- 2 boinc boinc    590097 Nov 20 11:10 input.tar.gz
[2025-11-20 23:28:51] -rw-r--r-- 2 boinc boinc     15120 Nov 20 11:10 start_atlas.sh
[2025-11-20 23:28:51] drwxrwx--x 2 boinc boinc      4096 Nov 20 11:10 shared
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc         0 Nov 20 11:10 boinc_setup_complete
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc      6204 Nov 20 11:10 init_data.xml
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc         0 Nov 20 11:10 boinc_lockfile
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc      2773 Nov 20 11:10 pandaJob.out
[2025-11-20 23:28:51] -rw------- 1 boinc boinc    989435 Nov 20 11:10 agis_schedconf.cvmfs.json
[2025-11-20 23:28:51] drwx------ 5 boinc boinc      4096 Nov 20 11:10 pilot3
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc       532 Nov 20 23:23 boinc_task_state.xml
[2025-11-20 23:28:51] -rw------- 1 boinc boinc 927417795 Nov 20 23:27 HITS.47493068._001402.pool.root.1
[2025-11-20 23:28:51] -rw------- 1 boinc boinc        95 Nov 20 23:27 pilot_heartbeat.json
[2025-11-20 23:28:51] -rw------- 1 boinc boinc      1023 Nov 20 23:27 memory_monitor_summary.json
[2025-11-20 23:28:51] -rw------- 1 boinc boinc   1526164 Nov 20 23:27 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:28:51] -rw------- 1 boinc boinc   1212909 Nov 20 23:27 log.47493068._001402.job.log.tgz.1
[2025-11-20 23:28:51] -rw------- 1 boinc boinc      8576 Nov 20 23:27 heartbeat.json
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc      8192 Nov 20 23:28 boinc_mmap_file
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc        28 Nov 20 23:28 wrapper_checkpoint.txt
[2025-11-20 23:28:51] -rw------- 1 boinc boinc      4823 Nov 20 23:28 pilotlog.txt
[2025-11-20 23:28:51] -rw------- 1 boinc boinc   6198316 Nov 20 23:28 log.47493068._001402.job.log.1
[2025-11-20 23:28:51] -rw------- 1 boinc boinc       353 Nov 20 23:28 output.list
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc       620 Nov 20 23:28 runtime_log
[2025-11-20 23:28:51] -rw------- 1 boinc boinc   7434240 Nov 20 23:28 result.tar.gz
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc      8783 Nov 20 23:28 runtime_log.err
[2025-11-20 23:28:51] -rw------- 1 boinc boinc       667 Nov 20 23:28 T7IKDmdqcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiIFKDmNJdfJn.diag
[2025-11-20 23:28:51] -rw-r--r-- 1 boinc boinc     21215 Nov 20 23:28 stderr.txt
[2025-11-20 23:28:51] HITS file was successfully produced:
[2025-11-20 23:28:51] -rw------- 1 boinc boinc 927417795 Nov 20 23:27 shared/HITS.pool.root.1
[2025-11-20 23:28:51]  *** Contents of shared directory: ***
[2025-11-20 23:28:51] total 1314612
[2025-11-20 23:28:51] -rw-r--r-- 2 boinc boinc 410687051 Nov 20 11:10 ATLAS.root_0
[2025-11-20 23:28:51] -rw-r--r-- 2 boinc boinc    590097 Nov 20 11:10 input.tar.gz
[2025-11-20 23:28:51] -rw-r--r-- 2 boinc boinc     15120 Nov 20 11:10 start_atlas.sh
[2025-11-20 23:28:51] -rw------- 1 boinc boinc 927417795 Nov 20 23:27 HITS.pool.root.1
[2025-11-20 23:28:51] -rw------- 1 boinc boinc   7434240 Nov 20 23:28 result.tar.gz
23:28:52 (773686): run_atlas exited; CPU time 87609.837740
23:28:52 (773686): called boinc_finish(0)

</stderr_txt>
]]>

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