Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:54:20 (2374233): wrapper (7.7.26015): starting
15:54:20 (2374233): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 15:54:20] Arguments: --nthreads 8
[2025-11-19 15:54:20] Threads: 8
[2025-11-19 15:54:20] Checking for CVMFS
[2025-11-19 15:54:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 15:54:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 15:54:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 15:54:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 15:54:21] 2.13.3.0 11771 20430 255932 153056 3 1025 18178470 32935937 35897 16776704 0 138555794 99.601 149505468 39681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 15:54:21] CVMFS is ok
[2025-11-19 15:54:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 15:54:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 15:54:21] Further information can be found at the LHC@home message board.
[2025-11-19 15:54:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 15:54:21] Checking for apptainer binary...
[2025-11-19 15:54:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 15:54:21] Running /usr/bin/apptainer --version
[2025-11-19 15:54:21] apptainer version 1.4.4-1.el9
[2025-11-19 15:54:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 15:54:22] c7-2-14.aglt2.org
[2025-11-19 15:54:22] apptainer works
[2025-11-19 15:54:22] Set ATHENA_PROC_NUMBER=8
[2025-11-19 15:54:22] Set ATHENA_CORE_NUMBER=8
[2025-11-19 15:54:22] Starting ATLAS job with PandaID=6891571562
[2025-11-19 15:54:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 20:56:52]  *** The last 200 lines of the pilot log: ***
[2025-11-20 20:56:52] 2025-11-21 01:56:13,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 20:56:52] 2025-11-21 01:56:13,352 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-11-20 20:56:52] 2025-11-21 01:56:13,354 | INFO     | this job has now completed (state=finished)
[2025-11-20 20:56:52] 2025-11-21 01:56:13,354 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-20 20:56:52] 2025-11-21 01:56:13,355 | INFO     | log transfer has been attempted: DONE
[2025-11-20 20:56:52] 2025-11-21 01:56:13,355 | INFO     | job 6891571562 has finished - writing final server update
[2025-11-20 20:56:52] 2025-11-21 01:56:13,355 | INFO     | total number of processed events: 1000 (read)
[2025-11-20 20:56:52] 2025-11-21 01:56:13,356 | INFO     | executing command: lscpu
[2025-11-20 20:56:52] 2025-11-21 01:56:13,423 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-20 20:56:52] 2025-11-21 01:56:13,901 | INFO     | time since job start (104494s) is within the limit (172800.0s)
[2025-11-20 20:56:52] 2025-11-21 01:56:15,778 | INFO     | monitor loop #6176: job 0:6891571562 is in state 'finished'
[2025-11-20 20:56:52] 2025-11-21 01:56:15,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 20:56:52] 2025-11-21 01:56:15,906 | INFO     | time since job start (104496s) is within the limit (172800.0s)
[2025-11-20 20:56:52] 2025-11-21 01:56:15,909 | INFO     | 104499s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-20 20:56:52] 2025-11-21 01:56:17,915 | INFO     | time since job start (104498s) is within the limit (172800.0s)
[2025-11-20 20:56:52] 2025-11-21 01:56:18,282 | INFO     | monitor loop #6177: job 0:6891571562 is in state 'finished'
[2025-11-20 20:56:52] 2025-11-21 01:56:18,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 20:56:52] 2025-11-21 01:56:18,887 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 20:56:52] 2025-11-21 01:56:18,893 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3087.5531666666666
[2025-11-20 20:56:52] 2025-11-21 01:56:18,908 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6891571562/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 20:56:52] 2025-11-21 01:56:18,909 | INFO     | extracted standard info from prmon json
[2025-11-20 20:56:52] 2025-11-21 01:56:18,909 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 20:56:52] 2025-11-21 01:56:18,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 20:56:52] 2025-11-21 01:56:18,932 | INFO     | fitting pss+swap vs Time
[2025-11-20 20:56:52] 2025-11-21 01:56:18,934 | INFO     | sum of square deviations: 1558620539835.8606
[2025-11-20 20:56:52] 2025-11-21 01:56:18,993 | INFO     | sum of deviations: 125468191351382.39
[2025-11-20 20:56:52] 2025-11-21 01:56:18,993 | INFO     | mean x: 1763637942.1085815
[2025-11-20 20:56:52] 2025-11-21 01:56:18,993 | INFO     | mean y: 6504650.126678342
[2025-11-20 20:56:52] 2025-11-21 01:56:18,994 | INFO     | intersect: -141965487338.5975
[2025-11-20 20:56:52] 2025-11-21 01:56:18,995 | INFO     | chi2: 41.64581004400116
[2025-11-20 20:56:52] 2025-11-21 01:56:18,996 | INFO     | sum of square deviations: 1545012435959.641
[2025-11-20 20:56:52] 2025-11-21 01:56:19,053 | INFO     | sum of deviations: 126917767757076.31
[2025-11-20 20:56:52] 2025-11-21 01:56:19,054 | INFO     | mean x: 1763637789.6118267
[2025-11-20 20:56:52] 2025-11-21 01:56:19,054 | INFO     | mean y: 6520891.855971897
[2025-11-20 20:56:52] 2025-11-21 01:56:19,056 | INFO     | intersect: -144870611602.2441
[2025-11-20 20:56:52] 2025-11-21 01:56:19,058 | INFO     | chi2: 36.26355571806661
[2025-11-20 20:56:52] 2025-11-21 01:56:19,058 | INFO     | current chi2=36.26355571806661 (change=12.923879545740352 %)
[2025-11-20 20:56:52] 2025-11-21 01:56:19,058 | INFO     | right removable region: 1707
[2025-11-20 20:56:52] 2025-11-21 01:56:19,059 | INFO     | sum of square deviations: 1545011277569.6409
[2025-11-20 20:56:52] 2025-11-21 01:56:19,115 | INFO     | sum of deviations: 123987166518342.97
[2025-11-20 20:56:52] 2025-11-21 01:56:19,115 | INFO     | mean x: 1763638094.6118267
[2025-11-20 20:56:52] 2025-11-21 01:56:19,115 | INFO     | mean y: 6521242.916861827
[2025-11-20 20:56:52] 2025-11-21 01:56:19,115 | INFO     | intersect: -141525448969.43213
[2025-11-20 20:56:52] 2025-11-21 01:56:19,116 | INFO     | chi2: 39.25170222779472
[2025-11-20 20:56:52] 2025-11-21 01:56:19,117 | INFO     | current chi2=39.25170222779472 (change=5.748736340287115 %)
[2025-11-20 20:56:52] 2025-11-21 01:56:19,117 | INFO     | left removable region: 10
[2025-11-20 20:56:52] 2025-11-21 01:56:19,118 | INFO     | sum of square deviations: 1515352018966.8975
[2025-11-20 20:56:52] 2025-11-21 01:56:19,174 | INFO     | sum of deviations: 124464761563725.84
[2025-11-20 20:56:52] 2025-11-21 01:56:19,174 | INFO     | mean x: 1763638064.1166766
[2025-11-20 20:56:52] 2025-11-21 01:56:19,174 | INFO     | mean y: 6551115.703594578
[2025-11-20 20:56:52] 2025-11-21 01:56:19,175 | INFO     | intersect: -144851401615.73257
[2025-11-20 20:56:52] 2025-11-21 01:56:19,176 | INFO     | chi2: 33.33855072824633
[2025-11-20 20:56:52] 2025-11-21 01:56:19,176 | INFO     | current memory leak: 82.14 B/s (using 1697 data points, chi2=33.34)
[2025-11-20 20:56:52] 2025-11-21 01:56:19,177 | INFO     | could have reported an average CPU frequency of 3161 MHz (61 samples)
[2025-11-20 20:56:52] 2025-11-21 01:56:19,177 | INFO     | ..............................
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . Timing measurements:
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . get job = 0 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . initial setup = 2 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . payload setup = 12 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . stage-in = 0 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . payload execution = 104450 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . stage-out = 3 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | . log creation = 0 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,178 | INFO     | ..............................
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | 
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | job summary report
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | --------------------------------------------------
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | PanDA job id: 6891571562
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | task id: 47493068
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | errors: (none)
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | pilot state: finished 
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | transexitcode: 0
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | exeerrorcode: 0
[2025-11-20 20:56:52] 2025-11-21 01:56:19,466 | INFO     | exeerrordiag: 
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | exitcode: 0
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | exitmsg: OK
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | cpuconsumptiontime: 197465 s
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | nevents: 1000
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | neventsw: 0
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | pid: 2396671
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | pgrp: 2396671
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | corecount: 8
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | event service: False
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | sizes: {0: 2296372, 1: 2297228, 9: 2297490, 12: 2297518, 104467: 2371594, 104471: 2382184, 104472: 2382368, 104479: 2382614}
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | --------------------------------------------------
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | 
[2025-11-20 20:56:52] 2025-11-21 01:56:19,467 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-20 20:56:52] 2025-11-21 01:56:19,495 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,497 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 20:56:52] 2025-11-21 01:56:19,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,497 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 20:56:52] 2025-11-21 01:56:19,497 | INFO     | job 6891571562 has completed (purged errors)
[2025-11-20 20:56:52] 2025-11-21 01:56:19,497 | INFO     | overall cleanup function is called
[2025-11-20 20:56:52] 2025-11-21 01:56:20,514 | INFO     | --- collectZombieJob: --- 10, [2396671]
[2025-11-20 20:56:52] 2025-11-21 01:56:20,514 | INFO     | zombie collector waiting for pid 2396671
[2025-11-20 20:56:52] 2025-11-21 01:56:20,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 20:56:52] 2025-11-21 01:56:20,514 | INFO     | collected zombie processes
[2025-11-20 20:56:52] 2025-11-21 01:56:20,514 | INFO     | will attempt to kill all subprocesses of pid=2396671
[2025-11-20 20:56:52] 2025-11-21 01:56:20,968 | INFO     | process IDs to be killed: [2396671] (in reverse order)
[2025-11-20 20:56:52] 2025-11-21 01:56:21,156 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 20:56:52] 2025-11-21 01:56:21,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 20:56:52] 2025-11-21 01:56:21,179 | INFO     | did not find any defunct processes belonging to 2396671
[2025-11-20 20:56:52] 2025-11-21 01:56:21,202 | INFO     | did not find any defunct processes belonging to 2396671
[2025-11-20 20:56:52] 2025-11-21 01:56:21,204 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 20:56:52] 2025-11-21 01:56:21,204 | INFO     | ready for new job
[2025-11-20 20:56:52] 2025-11-21 01:56:21,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 20:56:52] 2025-11-21 01:56:21,210 | INFO     | ***************************************
[2025-11-20 20:56:52] 2025-11-21 01:56:21,210 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 20:56:52] 2025-11-21 01:56:21,211 | INFO     | ***************************************
[2025-11-20 20:56:52] 2025-11-21 01:56:21,211 | INFO     | 
[2025-11-20 20:56:52] 2025-11-21 01:56:21,216 | INFO     | architecture information:
[2025-11-20 20:56:52] 2025-11-21 01:56:21,216 | INFO     | executing command: cat /etc/os-release
[2025-11-20 20:56:52] 2025-11-21 01:56:21,236 | INFO     | cat /etc/os-release:
[2025-11-20 20:56:52] NAME="CentOS Linux"
[2025-11-20 20:56:52] VERSION="7 (Core)"
[2025-11-20 20:56:52] ID="centos"
[2025-11-20 20:56:52] ID_LIKE="rhel fedora"
[2025-11-20 20:56:52] VERSION_ID="7"
[2025-11-20 20:56:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 20:56:52] ANSI_COLOR="0;31"
[2025-11-20 20:56:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 20:56:52] HOME_URL="https://www.centos.org/"
[2025-11-20 20:56:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 20:56:52] 
[2025-11-20 20:56:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 20:56:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 20:56:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 20:56:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 20:56:52] 
[2025-11-20 20:56:52] 2025-11-21 01:56:21,237 | INFO     | ***************************************
[2025-11-20 20:56:52] 2025-11-21 01:56:21,740 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-20 20:56:52] 2025-11-21 01:56:21,762 | INFO     | sufficient remaining disk space (69535268864 B)
[2025-11-20 20:56:52] 2025-11-21 01:56:21,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 20:56:52] 2025-11-21 01:56:21,763 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 20:56:52] 2025-11-21 01:56:21,763 | INFO     | update_server=False
[2025-11-20 20:56:52] 2025-11-21 01:56:21,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 20:56:52] 2025-11-21 01:56:21,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:56:52] 2025-11-21 01:56:21,790 | INFO     | aborting loop
[2025-11-20 20:56:52] 2025-11-21 01:56:21,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 20:56:52] 2025-11-21 01:56:22,362 | INFO     | all data control threads have been joined
[2025-11-20 20:56:52] 2025-11-21 01:56:22,768 | INFO     | [job] retrieve thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:22,795 | INFO     | [job] job monitor thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:22,804 | INFO     | all payload control threads have been joined
[2025-11-20 20:56:52] 2025-11-21 01:56:22,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 20:56:52] 2025-11-21 01:56:22,900 | INFO     | all job control threads have been joined
[2025-11-20 20:56:52] 2025-11-21 01:56:22,950 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:22,957 | INFO     | [data] copytool_in thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:22,986 | INFO     | [job] validate thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,360 | INFO     | [payload] failed_post thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,367 | INFO     | [data] control thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,466 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,808 | INFO     | [data] copytool_out thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,809 | INFO     | [payload] control thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,907 | INFO     | [job] control thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:23,915 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:24,039 | INFO     | [payload] validate_post thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:24,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:56:52] 2025-11-21 01:56:25,279 | INFO     | [job] queue monitor thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:26,882 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 20:56:52] 2025-11-21 01:56:43,005 | INFO     | [monitor] cgroup control has ended
[2025-11-20 20:56:52] 2025-11-21 01:56:43,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521371924288)>', '<ExcThread(monitor, started 140521020303104)>']
[2025-11-20 20:56:52] 2025-11-21 01:56:48,919 | INFO     | all workflow threads have been joined
[2025-11-20 20:56:52] 2025-11-21 01:56:48,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 20:56:52] 2025-11-21 01:56:48,920 | INFO     | traces error code: 0
[2025-11-20 20:56:52] 2025-11-21 01:56:48,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 20:56:52] 2025-11-21 01:56:51,583 | INFO     | PID=2381597 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 20:56:52] 2025-11-21 01:56:51,583 | INFO     | .. there are 45 such processes running
[2025-11-20 20:56:52] 2025-11-21 01:56:51,584 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 20:56:52] 2025-11-21 01:56:51,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 20:56:52] 2025-11-21 01:56:51,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 20:56:52] 2025-11-21 01:56:51,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 20:56:52] 2025-11-21 01:56:51,584 | INFO     | [monitor] control thread has ended
[2025-11-20 20:56:52] 2025-11-21 01:56:51,734 [wrapper] ==== pilot stdout END ====
[2025-11-20 20:56:52] 2025-11-21 01:56:51,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 20:56:52] 2025-11-21 01:56:51,743 [wrapper] pilotpid: 2381597
[2025-11-20 20:56:52] 2025-11-21 01:56:51,748 [wrapper] Pilot exit status: 0
[2025-11-20 20:56:52] 2025-11-21 01:56:51,765 [wrapper] pandaids: 6891571562
[2025-11-20 20:56:52] 2025-11-21 01:56:51,888 [wrapper] cleanup supervisor_pilot 1900274 2381598
[2025-11-20 20:56:52] 2025-11-21 01:56:51,892 [wrapper] Test setup, not cleaning
[2025-11-20 20:56:52] 2025-11-21 01:56:51,896 [wrapper] apfmon messages muted
[2025-11-20 20:56:52] 2025-11-21 01:56:51,900 [wrapper] ==== wrapper stdout END ====
[2025-11-20 20:56:52] 2025-11-21 01:56:51,904 [wrapper] ==== wrapper stderr END ====
[2025-11-20 20:56:52]  *** Error codes and diagnostics ***
[2025-11-20 20:56:52]     "exeErrorCode": 0,
[2025-11-20 20:56:52]     "exeErrorDiag": "",
[2025-11-20 20:56:52]     "pilotErrorCode": 0,
[2025-11-20 20:56:52]     "pilotErrorDiag": "",
[2025-11-20 20:56:52]  *** Listing of results directory ***
[2025-11-20 20:56:52] total 1335556
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:47 pilot3.tar.gz
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:54 queuedata.json
[2025-11-20 20:56:52] -rwx------. 1 boincer umatlas     36292 Nov 18 10:56 runpilot2-wrapper.sh
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas       100 Nov 19 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 20:56:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 15:54 run_atlas
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas       105 Nov 19 15:54 job.xml
[2025-11-20 20:56:52] -rw-r--r--. 2 boincer umatlas 410663854 Nov 19 15:54 EVNT.47493065._000290.pool.root.1
[2025-11-20 20:56:52] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 15:54 start_atlas.sh
[2025-11-20 20:56:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 15:54 shared
[2025-11-20 20:56:52] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 15:54 input.tar.gz
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas         0 Nov 19 15:54 boinc_lockfile
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas      2773 Nov 19 15:54 pandaJob.out
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas    989443 Nov 19 15:54 agis_schedconf.cvmfs.json
[2025-11-20 20:56:52] drwx------. 5 boincer umatlas      4096 Nov 19 15:54 pilot3
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas       533 Nov 20 20:49 boinc_task_state.xml
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas 921670382 Nov 20 20:55 HITS.47493068._002892.pool.root.1
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas      1076 Nov 20 20:56 memory_monitor_summary.json
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas   1526164 Nov 20 20:56 agis_ddmendpoints.agis.ALL.json
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas   2661150 Nov 20 20:56 log.47493068._002892.job.log.tgz.1
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas      6945 Nov 20 20:56 init_data.xml
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas      8647 Nov 20 20:56 heartbeat.json
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 20:56 boinc_mmap_file
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas        29 Nov 20 20:56 wrapper_checkpoint.txt
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas        95 Nov 20 20:56 pilot_heartbeat.json
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas       823 Nov 20 20:56 pilotlog.txt
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas  13015619 Nov 20 20:56 log.47493068._002892.job.log.1
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas       353 Nov 20 20:56 output.list
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas       620 Nov 20 20:56 runtime_log
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas  15697920 Nov 20 20:56 result.tar.gz
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas      8700 Nov 20 20:56 runtime_log.err
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas       669 Nov 20 20:56 4yuLDmXFdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2PFKDmUmLgTm.diag
[2025-11-20 20:56:52] -rw-r--r--. 1 boincer umatlas     21792 Nov 20 20:56 stderr.txt
[2025-11-20 20:56:52] HITS file was successfully produced:
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas 921670382 Nov 20 20:55 shared/HITS.pool.root.1
[2025-11-20 20:56:52]  *** Contents of shared directory: ***
[2025-11-20 20:56:52] total 1317048
[2025-11-20 20:56:52] -rw-r--r--. 2 boincer umatlas 410663854 Nov 19 15:54 ATLAS.root_0
[2025-11-20 20:56:52] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 15:54 start_atlas.sh
[2025-11-20 20:56:52] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 15:54 input.tar.gz
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas 921670382 Nov 20 20:55 HITS.pool.root.1
[2025-11-20 20:56:52] -rw-------. 1 boincer umatlas  15697920 Nov 20 20:56 result.tar.gz
20:56:53 (2374233): run_atlas exited; CPU time 200395.164236
20:56:53 (2374233): called boinc_finish(0)

</stderr_txt>
]]>

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