Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:03 (28672): wrapper (7.7.26015): starting
01:19:03 (28672): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 01:19:03] Arguments: --nthreads 8
[2025-11-22 01:19:03] Threads: 8
[2025-11-22 01:19:03] Checking for CVMFS
[2025-11-22 01:19:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:19:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:19:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:19:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:19:05] 2.11.2.0 5744 278831 142592 153153 0 20 18877117 25165824 4632 130560 2 159824496 99.889 80389532 3414 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 01:19:05] CVMFS is ok
[2025-11-22 01:19:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:19:05] Checking for apptainer binary...
[2025-11-22 01:19:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 01:19:05] Running /usr/bin/apptainer --version
[2025-11-22 01:19:05] apptainer version 1.3.2-1.el7
[2025-11-22 01:19:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:19:25] cg-vwn299.simple-grid.lan
[2025-11-22 01:19:25] apptainer works
[2025-11-22 01:19:26] Set ATHENA_PROC_NUMBER=8
[2025-11-22 01:19:26] Set ATHENA_CORE_NUMBER=8
[2025-11-22 01:19:26] Starting ATLAS job with PandaID=6891583746
[2025-11-22 01:19:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:22:15]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:22:15] 2025-11-23 02:20:54,671 | INFO     | time since job start (93452s) is within the limit (172800.0s)
[2025-11-23 03:22:15] 2025-11-23 02:20:56,680 | INFO     | time since job start (93454s) is within the limit (172800.0s)
[2025-11-23 03:22:15] 2025-11-23 02:20:56,927 | INFO     | monitor loop #6294: job 0:6891583746 is in state 'finished'
[2025-11-23 03:22:15] 2025-11-23 02:20:56,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:22:15] 2025-11-23 02:20:58,691 | INFO     | time since job start (93456s) is within the limit (172800.0s)
[2025-11-23 03:22:15] 2025-11-23 02:20:59,434 | INFO     | monitor loop #6295: job 0:6891583746 is in state 'finished'
[2025-11-23 03:22:15] 2025-11-23 02:20:59,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:22:15] 2025-11-23 02:21:00,706 | INFO     | time since job start (93458s) is within the limit (172800.0s)
[2025-11-23 03:22:15] 2025-11-23 02:21:01,940 | INFO     | monitor loop #6296: job 0:6891583746 is in state 'finished'
[2025-11-23 03:22:15] 2025-11-23 02:21:01,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:22:15] 2025-11-23 02:21:02,715 | INFO     | time since job start (93460s) is within the limit (172800.0s)
[2025-11-23 03:22:15] 2025-11-23 02:21:04,445 | INFO     | monitor loop #6297: job 0:6891583746 is in state 'finished'
[2025-11-23 03:22:15] 2025-11-23 02:21:04,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:22:15] 2025-11-23 02:21:04,725 | INFO     | time since job start (93462s) is within the limit (172800.0s)
[2025-11-23 03:22:15] 2025-11-23 02:21:05,306 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 03:22:15] 2025-11-23 02:21:05,307 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-23 03:22:15] 2025-11-23 02:21:05,309 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6891583746/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:22:15] 2025-11-23 02:21:05,310 | INFO     | extracted standard info from prmon json
[2025-11-23 03:22:15] 2025-11-23 02:21:05,310 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:22:15] 2025-11-23 02:21:05,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:22:15] 2025-11-23 02:21:05,360 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:22:15] 2025-11-23 02:21:05,363 | INFO     | sum of square deviations: 1093257365168.6555
[2025-11-23 03:22:15] 2025-11-23 02:21:05,430 | INFO     | sum of deviations: 3704337508276.764
[2025-11-23 03:22:15] 2025-11-23 02:21:05,430 | INFO     | mean x: 1763817951.8659658
[2025-11-23 03:22:15] 2025-11-23 02:21:05,431 | INFO     | mean y: 2835633.0282522994
[2025-11-23 03:22:15] 2025-11-23 02:21:05,431 | INFO     | intersect: -5973595173.693127
[2025-11-23 03:22:15] 2025-11-23 02:21:05,433 | INFO     | chi2: 29.48683868510417
[2025-11-23 03:22:15] 2025-11-23 02:21:05,435 | INFO     | sum of square deviations: 1082518811851.8054
[2025-11-23 03:22:15] 2025-11-23 02:21:05,498 | INFO     | sum of deviations: 4219036681504.528
[2025-11-23 03:22:15] 2025-11-23 02:21:05,499 | INFO     | mean x: 1763817799.3704681
[2025-11-23 03:22:15] 2025-11-23 02:21:05,499 | INFO     | mean y: 2842940.9136453527
[2025-11-23 03:22:15] 2025-11-23 02:21:05,499 | INFO     | intersect: -6871505951.282179
[2025-11-23 03:22:15] 2025-11-23 02:21:05,501 | INFO     | chi2: 26.10074847210665
[2025-11-23 03:22:15] 2025-11-23 02:21:05,501 | INFO     | current chi2=26.10074847210665 (change=11.483395182366802 %)
[2025-11-23 03:22:15] 2025-11-23 02:21:05,501 | INFO     | right removable region: 1516
[2025-11-23 03:22:15] 2025-11-23 02:21:05,503 | INFO     | sum of square deviations: 1082517543661.8053
[2025-11-23 03:22:15] 2025-11-23 02:21:05,568 | INFO     | sum of deviations: 3051898636659.9717
[2025-11-23 03:22:15] 2025-11-23 02:21:05,568 | INFO     | mean x: 1763818104.3704681
[2025-11-23 03:22:15] 2025-11-23 02:21:05,569 | INFO     | mean y: 2844897.4680290045
[2025-11-23 03:22:15] 2025-11-23 02:21:05,569 | INFO     | intersect: -4969817300.537083
[2025-11-23 03:22:15] 2025-11-23 02:21:05,571 | INFO     | chi2: 24.53921256460458
[2025-11-23 03:22:15] 2025-11-23 02:21:05,571 | INFO     | current chi2=24.53921256460458 (change=16.77909990059049 %)
[2025-11-23 03:22:15] 2025-11-23 02:21:05,571 | INFO     | left removable region: 10
[2025-11-23 03:22:15] 2025-11-23 02:21:05,573 | INFO     | sum of square deviations: 1059139500034.487
[2025-11-23 03:22:15] 2025-11-23 02:21:05,652 | INFO     | sum of deviations: 3082713447020.1904
[2025-11-23 03:22:15] 2025-11-23 02:21:05,652 | INFO     | mean x: 1763818073.8804781
[2025-11-23 03:22:15] 2025-11-23 02:21:05,652 | INFO     | mean y: 2862313.523240372
[2025-11-23 03:22:15] 2025-11-23 02:21:05,652 | INFO     | intersect: -5130876626.693374
[2025-11-23 03:22:15] 2025-11-23 02:21:05,654 | INFO     | chi2: 16.421919628060724
[2025-11-23 03:22:15] 2025-11-23 02:21:05,655 | INFO     | current memory leak: 2.91 B/s (using 1506 data points, chi2=16.42)
[2025-11-23 03:22:15] 2025-11-23 02:21:05,657 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | ..............................
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . Timing measurements:
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . get job = 0 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . initial setup = 9 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . payload setup = 192 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . stage-in = 0 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . payload execution = 92955 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . stage-out = 5 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,658 | INFO     | . log creation = 2 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,659 | INFO     | ..............................
[2025-11-23 03:22:15] 2025-11-23 02:21:05,785 | INFO     | 
[2025-11-23 03:22:15] 2025-11-23 02:21:05,785 | INFO     | job summary report
[2025-11-23 03:22:15] 2025-11-23 02:21:05,785 | INFO     | --------------------------------------------------
[2025-11-23 03:22:15] 2025-11-23 02:21:05,785 | INFO     | PanDA job id: 6891583746
[2025-11-23 03:22:15] 2025-11-23 02:21:05,785 | INFO     | task id: 47493068
[2025-11-23 03:22:15] 2025-11-23 02:21:05,785 | INFO     | errors: (none)
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | pilot state: finished 
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | transexitcode: 0
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | exeerrorcode: 0
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | exeerrordiag: 
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | exitcode: 0
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | exitmsg: OK
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | cpuconsumptiontime: 341771 s
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | nevents: 1000
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | neventsw: 0
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | pid: 6691
[2025-11-23 03:22:15] 2025-11-23 02:21:05,786 | INFO     | pgrp: 6691
[2025-11-23 03:22:15] 2025-11-23 02:21:05,787 | INFO     | corecount: 8
[2025-11-23 03:22:15] 2025-11-23 02:21:05,787 | INFO     | event service: False
[2025-11-23 03:22:15] 2025-11-23 02:21:05,787 | INFO     | sizes: {0: 2298569, 1: 2298824, 2: 2298824, 12: 2298852, 23: 2298880, 34: 2298908, 45: 2299064, 55: 2299092, 66: 2299120, 77: 2299148, 88: 2299204, 98: 2299802, 10
[2025-11-23 03:22:15] 2025-11-23 02:21:05,787 | INFO     | --------------------------------------------------
[2025-11-23 03:22:15] 2025-11-23 02:21:05,787 | INFO     | 
[2025-11-23 03:22:15] 2025-11-23 02:21:05,787 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-23 03:22:15] 2025-11-23 02:21:06,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | job 6891583746 has completed (purged errors)
[2025-11-23 03:22:15] 2025-11-23 02:21:06,403 | INFO     | overall cleanup function is called
[2025-11-23 03:22:15] 2025-11-23 02:21:07,428 | INFO     | --- collectZombieJob: --- 10, [6691]
[2025-11-23 03:22:15] 2025-11-23 02:21:07,429 | INFO     | zombie collector waiting for pid 6691
[2025-11-23 03:22:15] 2025-11-23 02:21:07,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:22:15] 2025-11-23 02:21:07,429 | INFO     | collected zombie processes
[2025-11-23 03:22:15] 2025-11-23 02:21:07,429 | INFO     | will attempt to kill all subprocesses of pid=6691
[2025-11-23 03:22:15] 2025-11-23 02:21:07,532 | INFO     | process IDs to be killed: [6691] (in reverse order)
[2025-11-23 03:22:15] 2025-11-23 02:21:08,507 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:22:15] 2025-11-23 02:21:08,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:22:15] 2025-11-23 02:21:08,511 | INFO     | did not find any defunct processes belonging to 6691
[2025-11-23 03:22:15] 2025-11-23 02:21:08,515 | INFO     | did not find any defunct processes belonging to 6691
[2025-11-23 03:22:15] 2025-11-23 02:21:08,537 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:22:15] 2025-11-23 02:21:08,537 | INFO     | ready for new job
[2025-11-23 03:22:15] 2025-11-23 02:21:08,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:22:15] 2025-11-23 02:21:08,545 | INFO     | ***************************************
[2025-11-23 03:22:15] 2025-11-23 02:21:08,545 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:22:15] 2025-11-23 02:21:08,545 | INFO     | ***************************************
[2025-11-23 03:22:15] 2025-11-23 02:21:08,545 | INFO     | 
[2025-11-23 03:22:15] 2025-11-23 02:21:08,546 | INFO     | pilot is running in a VM
[2025-11-23 03:22:15] 2025-11-23 02:21:08,546 | INFO     | architecture information:
[2025-11-23 03:22:15] 2025-11-23 02:21:08,550 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:22:15] 2025-11-23 02:21:08,694 | INFO     | cat /etc/os-release:
[2025-11-23 03:22:15] NAME="CentOS Linux"
[2025-11-23 03:22:15] VERSION="7 (Core)"
[2025-11-23 03:22:15] ID="centos"
[2025-11-23 03:22:15] ID_LIKE="rhel fedora"
[2025-11-23 03:22:15] VERSION_ID="7"
[2025-11-23 03:22:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:22:15] ANSI_COLOR="0;31"
[2025-11-23 03:22:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:22:15] HOME_URL="https://www.centos.org/"
[2025-11-23 03:22:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:22:15] 
[2025-11-23 03:22:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:22:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:22:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:22:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:22:15] 
[2025-11-23 03:22:15] 2025-11-23 02:21:08,694 | INFO     | ***************************************
[2025-11-23 03:22:15] 2025-11-23 02:21:09,198 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-23 03:22:15] 2025-11-23 02:21:09,436 | INFO     | sufficient remaining disk space (495207841792 B)
[2025-11-23 03:22:15] 2025-11-23 02:21:09,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:22:15] 2025-11-23 02:21:09,437 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:22:15] 2025-11-23 02:21:09,437 | INFO     | update_server=False
[2025-11-23 03:22:15] 2025-11-23 02:21:09,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:22:15] 2025-11-23 02:21:09,471 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 03:22:15] 2025-11-23 02:21:09,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 03:22:15] 2025-11-23 02:21:09,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:22:15] 2025-11-23 02:21:09,472 | INFO     | will abort loop
[2025-11-23 03:22:15] 2025-11-23 02:21:09,565 | INFO     | all payload control threads have been joined
[2025-11-23 03:22:15] 2025-11-23 02:21:09,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:22:15] 2025-11-23 02:21:09,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:22:15] 2025-11-23 02:21:10,201 | INFO     | all data control threads have been joined
[2025-11-23 03:22:15] 2025-11-23 02:21:10,443 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,479 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,572 | INFO     | [payload] control thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,582 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,603 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,641 | INFO     | [job] validate thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,708 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,740 | INFO     | all job control threads have been joined
[2025-11-23 03:22:15] 2025-11-23 02:21:10,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:22:15] 2025-11-23 02:21:10,822 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:10,912 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:11,206 | INFO     | [data] control thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:11,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:11,747 | INFO     | [job] control thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:11,808 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:11,948 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:11,965 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:13,601 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:22:15] 2025-11-23 02:21:37,906 | INFO     | PID=32484 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 03:22:15] 2025-11-23 02:21:37,906 | INFO     | .. there are 9 such processes running
[2025-11-23 03:22:15] 2025-11-23 02:21:37,907 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:22:15] 2025-11-23 02:21:37,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:22:15] 2025-11-23 02:21:37,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:22:15] 2025-11-23 02:22:05,215 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:22:15] 2025-11-23 02:22:06,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249841198912)>', '<ExcThread(monitor, started 140249095186176)>']
[2025-11-23 03:22:15] 2025-11-23 02:22:07,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:22:15] 2025-11-23 02:22:07,080 | INFO     | [monitor] control thread has ended
[2025-11-23 03:22:15] 2025-11-23 02:22:11,248 | INFO     | all workflow threads have been joined
[2025-11-23 03:22:15] 2025-11-23 02:22:11,249 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:22:15] 2025-11-23 02:22:11,249 | INFO     | traces error code: 0
[2025-11-23 03:22:15] 2025-11-23 02:22:11,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:22:15] 2025-11-23 02:22:11,614 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:22:15] 2025-11-23 02:22:11,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:22:15] 2025-11-23 02:22:11,883 [wrapper] pilotpid: 32484
[2025-11-23 03:22:15] 2025-11-23 02:22:11,935 [wrapper] Pilot exit status: 0
[2025-11-23 03:22:15] 2025-11-23 02:22:12,246 [wrapper] pandaids: 6891583746
[2025-11-23 03:22:15] 2025-11-23 02:22:12,965 [wrapper] cleanup supervisor_pilot 13490 32485
[2025-11-23 03:22:15] 2025-11-23 02:22:13,083 [wrapper] Test setup, not cleaning
[2025-11-23 03:22:15] 2025-11-23 02:22:13,164 [wrapper] apfmon messages muted
[2025-11-23 03:22:15] 2025-11-23 02:22:13,259 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:22:15] 2025-11-23 02:22:13,332 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:22:15]  *** Error codes and diagnostics ***
[2025-11-23 03:22:15]     "exeErrorCode": 0,
[2025-11-23 03:22:15]     "exeErrorDiag": "",
[2025-11-23 03:22:15]     "pilotErrorCode": 0,
[2025-11-23 03:22:15]     "pilotErrorDiag": "",
[2025-11-23 03:22:15]  *** Listing of results directory ***
[2025-11-23 03:22:15] total 1351520
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:10 queuedata.json
[2025-11-23 03:22:15] -rwx------. 1 boinc boinc     36292 Nov 18 18:10 runpilot2-wrapper.sh
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc       100 Nov 22 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:22:15] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 01:19 run_atlas
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc       105 Nov 22 01:19 job.xml
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc      6389 Nov 22 01:19 init_data.xml
[2025-11-23 03:22:15] -rw-r--r--. 2 boinc boinc 411116564 Nov 22 01:19 EVNT.47493065._000441.pool.root.1
[2025-11-23 03:22:15] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:19 start_atlas.sh
[2025-11-23 03:22:15] drwxrwx--x. 2 boinc boinc        68 Nov 22 01:19 shared
[2025-11-23 03:22:15] -rw-r--r--. 2 boinc boinc    590100 Nov 22 01:19 input.tar.gz
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc         0 Nov 22 01:19 boinc_lockfile
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc      2773 Nov 22 01:19 pandaJob.out
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc    989798 Nov 22 01:23 agis_schedconf.cvmfs.json
[2025-11-23 03:22:15] drwx------. 5 boinc boinc      4096 Nov 22 01:23 pilot3
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc       533 Nov 23 02:51 boinc_task_state.xml
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc 938878698 Nov 23 03:17 HITS.47493068._004407.pool.root.1
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc      1031 Nov 23 03:19 memory_monitor_summary.json
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc   1526164 Nov 23 03:19 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc   2588029 Nov 23 03:19 log.47493068._004407.job.log.tgz.1
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc        95 Nov 23 03:20 pilot_heartbeat.json
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc      7957 Nov 23 03:21 heartbeat.json
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc        29 Nov 23 03:21 wrapper_checkpoint.txt
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc      8192 Nov 23 03:21 boinc_mmap_file
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc      5070 Nov 23 03:22 pilotlog.txt
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc  12440322 Nov 23 03:22 log.47493068._004407.job.log.1
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc       353 Nov 23 03:22 output.list
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc       620 Nov 23 03:22 runtime_log
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc  15042560 Nov 23 03:22 result.tar.gz
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc       662 Nov 23 03:22 YCLLDmEPef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhXFKDmBIpDJo.diag
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc      8703 Nov 23 03:22 runtime_log.err
[2025-11-23 03:22:15] -rw-r--r--. 1 boinc boinc     21416 Nov 23 03:22 stderr.txt
[2025-11-23 03:22:15] HITS file was successfully produced:
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc 938878698 Nov 23 03:17 shared/HITS.pool.root.1
[2025-11-23 03:22:15]  *** Contents of shared directory: ***
[2025-11-23 03:22:15] total 1333648
[2025-11-23 03:22:15] -rw-r--r--. 2 boinc boinc 411116564 Nov 22 01:19 ATLAS.root_0
[2025-11-23 03:22:15] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:19 start_atlas.sh
[2025-11-23 03:22:15] -rw-r--r--. 2 boinc boinc    590100 Nov 22 01:19 input.tar.gz
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc 938878698 Nov 23 03:17 HITS.pool.root.1
[2025-11-23 03:22:15] -rw-------. 1 boinc boinc  15042560 Nov 23 03:22 result.tar.gz
03:22:16 (28672): run_atlas exited; CPU time 342307.484679
03:22:16 (28672): called boinc_finish(0)

</stderr_txt>
]]>

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