Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:58:05 (32126): wrapper (7.7.26015): starting
22:58:05 (32126): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:58:05] Arguments: --nthreads 8
[2025-11-21 22:58:05] Threads: 8
[2025-11-21 22:58:05] Checking for CVMFS
[2025-11-21 22:58:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:58:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:58:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:58:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:58:07] 2.11.2.0 21973 75958 89260 153145 1 128 24334177 25165825 3959 130560 3 23344606 99.882 13609245 2369 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 22:58:07] CVMFS is ok
[2025-11-21 22:58:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:58:07] Checking for apptainer binary...
[2025-11-21 22:58:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:58:07] Running /usr/bin/apptainer --version
[2025-11-21 22:58:08] apptainer version 1.3.2-1.el7
[2025-11-21 22:58:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:58:11] cg-vwn333.simple-grid.lan
[2025-11-21 22:58:11] apptainer works
[2025-11-21 22:58:11] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:58:11] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:58:11] Starting ATLAS job with PandaID=6891582722
[2025-11-21 22:58:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:31:16]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:31:16] 2025-11-22 23:30:32,859 | INFO     | sum of square deviations: 1044438057573.1831
[2025-11-23 00:31:16] 2025-11-22 23:30:32,932 | INFO     | sum of deviations: 3557049542173.3457
[2025-11-23 00:31:16] 2025-11-22 23:30:32,932 | INFO     | mean x: 1763808443.4289527
[2025-11-23 00:31:16] 2025-11-22 23:30:32,932 | INFO     | mean y: 2878982.885923949
[2025-11-23 00:31:16] 2025-11-22 23:30:32,933 | INFO     | intersect: -6004135000.076704
[2025-11-23 00:31:16] 2025-11-22 23:30:32,934 | INFO     | chi2: 9.551788717042536
[2025-11-23 00:31:16] 2025-11-22 23:30:32,937 | INFO     | sum of square deviations: 1034022171380.4381
[2025-11-23 00:31:16] 2025-11-22 23:30:33,012 | INFO     | sum of deviations: 4051610958696.4043
[2025-11-23 00:31:16] 2025-11-22 23:30:33,013 | INFO     | mean x: 1763808290.933735
[2025-11-23 00:31:16] 2025-11-22 23:30:33,013 | INFO     | mean y: 2886222.640562249
[2025-11-23 00:31:16] 2025-11-22 23:30:33,013 | INFO     | intersect: -6908247018.386856
[2025-11-23 00:31:16] 2025-11-22 23:30:33,015 | INFO     | chi2: 6.4954559603408235
[2025-11-23 00:31:16] 2025-11-22 23:30:33,015 | INFO     | current chi2=6.4954559603408235 (change=31.997491226418447 %)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,017 | INFO     | sum of square deviations: 1023675774862.6271
[2025-11-23 00:31:16] 2025-11-22 23:30:33,082 | INFO     | sum of deviations: 4565498911645.055
[2025-11-23 00:31:16] 2025-11-22 23:30:33,082 | INFO     | mean x: 1763808138.4385493
[2025-11-23 00:31:16] 2025-11-22 23:30:33,082 | INFO     | mean y: 2893794.563465413
[2025-11-23 00:31:16] 2025-11-22 23:30:33,082 | INFO     | intersect: -7863526740.270936
[2025-11-23 00:31:16] 2025-11-22 23:30:33,084 | INFO     | chi2: 3.124021820789756
[2025-11-23 00:31:16] 2025-11-22 23:30:33,084 | INFO     | current chi2=3.124021820789756 (change=51.90450308855862 %)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,086 | INFO     | sum of square deviations: 1013398363341.8982
[2025-11-23 00:31:16] 2025-11-22 23:30:33,151 | INFO     | sum of deviations: 4626847476796.156
[2025-11-23 00:31:16] 2025-11-22 23:30:33,152 | INFO     | mean x: 1763807985.9413748
[2025-11-23 00:31:16] 2025-11-22 23:30:33,152 | INFO     | mean y: 2894703.2203504043
[2025-11-23 00:31:16] 2025-11-22 23:30:33,152 | INFO     | intersect: -8050079156.332315
[2025-11-23 00:31:16] 2025-11-22 23:30:33,154 | INFO     | chi2: 2.963718357004511
[2025-11-23 00:31:16] 2025-11-22 23:30:33,154 | INFO     | current chi2=2.963718357004511 (change=5.131317032373362 %)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,154 | INFO     | right removable region: 1483
[2025-11-23 00:31:16] 2025-11-22 23:30:33,156 | INFO     | sum of square deviations: 1034020864760.4414
[2025-11-23 00:31:16] 2025-11-22 23:30:33,224 | INFO     | sum of deviations: 3091364480185.458
[2025-11-23 00:31:16] 2025-11-22 23:30:33,224 | INFO     | mean x: 1763808595.933735
[2025-11-23 00:31:16] 2025-11-22 23:30:33,224 | INFO     | mean y: 2885797.459170013
[2025-11-23 00:31:16] 2025-11-22 23:30:33,225 | INFO     | intersect: -5270291397.643723
[2025-11-23 00:31:16] 2025-11-22 23:30:33,226 | INFO     | chi2: 7.037535919771927
[2025-11-23 00:31:16] 2025-11-22 23:30:33,227 | INFO     | current chi2=7.037535919771927 (change=26.322324244720964 %)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,229 | INFO     | sum of square deviations: 1023673890337.6014
[2025-11-23 00:31:16] 2025-11-22 23:30:33,289 | INFO     | sum of deviations: 2982983714414.275
[2025-11-23 00:31:16] 2025-11-22 23:30:33,289 | INFO     | mean x: 1763808748.4331765
[2025-11-23 00:31:16] 2025-11-22 23:30:33,289 | INFO     | mean y: 2887394.585627938
[2025-11-23 00:31:16] 2025-11-22 23:30:33,290 | INFO     | intersect: -5136847848.815382
[2025-11-23 00:31:16] 2025-11-22 23:30:33,291 | INFO     | chi2: 6.970186603142862
[2025-11-23 00:31:16] 2025-11-22 23:30:33,292 | INFO     | current chi2=6.970186603142862 (change=0.9570013907829255 %)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,292 | INFO     | left removable region: 20
[2025-11-23 00:31:16] 2025-11-22 23:30:33,294 | INFO     | sum of square deviations: 970982087015.538
[2025-11-23 00:31:16] 2025-11-22 23:30:33,360 | INFO     | sum of deviations: 3896008159718.034
[2025-11-23 00:31:16] 2025-11-22 23:30:33,361 | INFO     | mean x: 1763808565.4463432
[2025-11-23 00:31:16] 2025-11-22 23:30:33,361 | INFO     | mean y: 2905742.987696514
[2025-11-23 00:31:16] 2025-11-22 23:30:33,361 | INFO     | intersect: -7074271740.565147
[2025-11-23 00:31:16] 2025-11-22 23:30:33,363 | INFO     | chi2: 0.30640543426888056
[2025-11-23 00:31:16] 2025-11-22 23:30:33,364 | INFO     | current memory leak: 4.01 B/s (using 1463 data points, chi2=0.31)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,367 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,367 | INFO     | ..............................
[2025-11-23 00:31:16] 2025-11-22 23:30:33,367 | INFO     | . Timing measurements:
[2025-11-23 00:31:16] 2025-11-22 23:30:33,367 | INFO     | . get job = 0 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,367 | INFO     | . initial setup = 4 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,367 | INFO     | . payload setup = 87 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,368 | INFO     | . stage-in = 0 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,368 | INFO     | . payload execution = 91490 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,368 | INFO     | . stage-out = 3 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,368 | INFO     | . log creation = 1 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,368 | INFO     | ..............................
[2025-11-23 00:31:16] 2025-11-22 23:30:33,508 | INFO     | 
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | job summary report
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | --------------------------------------------------
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | PanDA job id: 6891582722
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | task id: 47493068
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | errors: (none)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | pilot state: finished 
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | transexitcode: 0
[2025-11-23 00:31:16] 2025-11-22 23:30:33,509 | INFO     | exeerrorcode: 0
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | exeerrordiag: 
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | exitcode: 0
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | exitmsg: OK
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | cpuconsumptiontime: 338816 s
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | nevents: 1000
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | neventsw: 0
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | pid: 10760
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | pgrp: 10760
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | corecount: 8
[2025-11-23 00:31:16] 2025-11-22 23:30:33,510 | INFO     | event service: False
[2025-11-23 00:31:16] 2025-11-22 23:30:33,511 | INFO     | sizes: {0: 2298569, 1: 2298824, 2: 2298824, 12: 2298852, 23: 2298880, 34: 2298908, 45: 2299064, 56: 2299092, 66: 2299120, 73: 2299410, 77: 2299438, 91582: 2363983,
[2025-11-23 00:31:16] 2025-11-22 23:30:33,511 | INFO     | --------------------------------------------------
[2025-11-23 00:31:16] 2025-11-22 23:30:33,511 | INFO     | 
[2025-11-23 00:31:16] 2025-11-22 23:30:33,511 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-23 00:31:16] 2025-11-22 23:30:33,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:31:16] 2025-11-22 23:30:33,631 | INFO     | job 6891582722 has completed (purged errors)
[2025-11-23 00:31:16] 2025-11-22 23:30:33,632 | INFO     | overall cleanup function is called
[2025-11-23 00:31:16] 2025-11-22 23:30:34,651 | INFO     | --- collectZombieJob: --- 10, [10760]
[2025-11-23 00:31:16] 2025-11-22 23:30:34,652 | INFO     | zombie collector waiting for pid 10760
[2025-11-23 00:31:16] 2025-11-22 23:30:34,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:31:16] 2025-11-22 23:30:34,652 | INFO     | collected zombie processes
[2025-11-23 00:31:16] 2025-11-22 23:30:34,652 | INFO     | will attempt to kill all subprocesses of pid=10760
[2025-11-23 00:31:16] 2025-11-22 23:30:34,800 | INFO     | process IDs to be killed: [10760] (in reverse order)
[2025-11-23 00:31:16] 2025-11-22 23:30:35,124 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:31:16] 2025-11-22 23:30:35,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:31:16] 2025-11-22 23:30:35,129 | INFO     | did not find any defunct processes belonging to 10760
[2025-11-23 00:31:16] 2025-11-22 23:30:35,133 | INFO     | did not find any defunct processes belonging to 10760
[2025-11-23 00:31:16] 2025-11-22 23:30:35,169 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:31:16] 2025-11-22 23:30:35,169 | INFO     | ready for new job
[2025-11-23 00:31:16] 2025-11-22 23:30:35,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:31:16] 2025-11-22 23:30:35,177 | INFO     | ***************************************
[2025-11-23 00:31:16] 2025-11-22 23:30:35,184 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:31:16] 2025-11-22 23:30:35,185 | INFO     | ***************************************
[2025-11-23 00:31:16] 2025-11-22 23:30:35,185 | INFO     | 
[2025-11-23 00:31:16] 2025-11-22 23:30:35,185 | INFO     | pilot is running in a VM
[2025-11-23 00:31:16] 2025-11-22 23:30:35,186 | INFO     | architecture information:
[2025-11-23 00:31:16] 2025-11-22 23:30:35,204 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:31:16] 2025-11-22 23:30:35,440 | INFO     | cat /etc/os-release:
[2025-11-23 00:31:16] NAME="CentOS Linux"
[2025-11-23 00:31:16] VERSION="7 (Core)"
[2025-11-23 00:31:16] ID="centos"
[2025-11-23 00:31:16] ID_LIKE="rhel fedora"
[2025-11-23 00:31:16] VERSION_ID="7"
[2025-11-23 00:31:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:31:16] ANSI_COLOR="0;31"
[2025-11-23 00:31:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:31:16] HOME_URL="https://www.centos.org/"
[2025-11-23 00:31:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:31:16] 
[2025-11-23 00:31:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:31:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:31:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:31:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:31:16] 
[2025-11-23 00:31:16] 2025-11-22 23:30:35,440 | INFO     | ***************************************
[2025-11-23 00:31:16] 2025-11-22 23:30:35,943 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-23 00:31:16] 2025-11-22 23:30:36,147 | INFO     | sufficient remaining disk space (491170824192 B)
[2025-11-23 00:31:16] 2025-11-22 23:30:36,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:31:16] 2025-11-22 23:30:36,147 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:31:16] 2025-11-22 23:30:36,148 | INFO     | update_server=False
[2025-11-23 00:31:16] 2025-11-22 23:30:36,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:31:16] 2025-11-22 23:30:36,491 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 00:31:16] 2025-11-22 23:30:36,492 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 00:31:16] 2025-11-22 23:30:36,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:31:16] 2025-11-22 23:30:36,492 | INFO     | will abort loop
[2025-11-23 00:31:16] 2025-11-22 23:30:36,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:31:16] 2025-11-22 23:30:36,997 | INFO     | all payload control threads have been joined
[2025-11-23 00:31:16] 2025-11-22 23:30:37,152 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:37,157 | INFO     | [job] validate thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:37,236 | INFO     | all data control threads have been joined
[2025-11-23 00:31:16] 2025-11-22 23:30:37,354 | INFO     | all job control threads have been joined
[2025-11-23 00:31:16] 2025-11-22 23:30:37,498 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:37,521 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:37,548 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:37,610 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:37,745 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:37,899 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:38,003 | INFO     | [payload] control thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:38,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:38,203 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:38,243 | INFO     | [data] control thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:38,360 | INFO     | [job] control thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:38,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:31:16] 2025-11-22 23:30:38,845 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:39,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:31:16] 2025-11-22 23:30:39,529 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:30:43,239 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:31:16] 2025-11-22 23:31:05,025 | INFO     | PID=3761 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 00:31:16] 2025-11-22 23:31:05,025 | INFO     | .. there are 9 such processes running
[2025-11-23 00:31:16] 2025-11-22 23:31:05,025 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:31:16] 2025-11-22 23:31:05,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:31:16] 2025-11-22 23:31:05,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:31:16] 2025-11-22 23:31:06,929 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:31:16] 2025-11-22 23:31:08,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520012085056)>', '<ExcThread(monitor, started 140519434868480)>']
[2025-11-23 00:31:16] 2025-11-22 23:31:09,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:31:16] 2025-11-22 23:31:09,050 | INFO     | [monitor] control thread has ended
[2025-11-23 00:31:16] 2025-11-22 23:31:13,165 | INFO     | all workflow threads have been joined
[2025-11-23 00:31:16] 2025-11-22 23:31:13,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:31:16] 2025-11-22 23:31:13,166 | INFO     | traces error code: 0
[2025-11-23 00:31:16] 2025-11-22 23:31:13,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:31:16] 2025-11-22 23:31:13,473 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:31:16] 2025-11-22 23:31:13,479 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:31:16] 2025-11-22 23:31:13,486 [wrapper] pilotpid: 3761
[2025-11-23 00:31:16] 2025-11-22 23:31:13,537 [wrapper] Pilot exit status: 0
[2025-11-23 00:31:16] 2025-11-22 23:31:13,638 [wrapper] pandaids: 6891582722
[2025-11-23 00:31:16] 2025-11-22 23:31:14,291 [wrapper] cleanup supervisor_pilot 17791 3762
[2025-11-23 00:31:16] 2025-11-22 23:31:14,330 [wrapper] Test setup, not cleaning
[2025-11-23 00:31:16] 2025-11-22 23:31:14,336 [wrapper] apfmon messages muted
[2025-11-23 00:31:16] 2025-11-22 23:31:14,396 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:31:16] 2025-11-22 23:31:14,488 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:31:16]  *** Error codes and diagnostics ***
[2025-11-23 00:31:16]     "exeErrorCode": 0,
[2025-11-23 00:31:16]     "exeErrorDiag": "",
[2025-11-23 00:31:16]     "pilotErrorCode": 0,
[2025-11-23 00:31:16]     "pilotErrorDiag": "",
[2025-11-23 00:31:16]  *** Listing of results directory ***
[2025-11-23 00:31:16] total 1327716
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:02 queuedata.json
[2025-11-23 00:31:16] -rwx------. 1 boinc boinc     36292 Nov 18 18:04 runpilot2-wrapper.sh
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc       100 Nov 21 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:31:16] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 22:58 run_atlas
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc       105 Nov 21 22:58 job.xml
[2025-11-23 00:31:16] -rw-r--r--. 2 boinc boinc 409886089 Nov 21 22:58 EVNT.47493065._000430.pool.root.1
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc      6390 Nov 21 22:58 init_data.xml
[2025-11-23 00:31:16] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:58 start_atlas.sh
[2025-11-23 00:31:16] drwxrwx--x. 2 boinc boinc        68 Nov 21 22:58 shared
[2025-11-23 00:31:16] -rw-r--r--. 2 boinc boinc    590104 Nov 21 22:58 input.tar.gz
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc         0 Nov 21 22:58 boinc_lockfile
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc      2773 Nov 21 22:58 pandaJob.out
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc    989798 Nov 21 23:00 agis_schedconf.cvmfs.json
[2025-11-23 00:31:16] drwx------. 5 boinc boinc      4096 Nov 21 23:00 pilot3
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc       533 Nov 23 00:12 boinc_task_state.xml
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc 916272512 Nov 23 00:28 HITS.47493068._004299.pool.root.1
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc      1042 Nov 23 00:28 memory_monitor_summary.json
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc   1526164 Nov 23 00:29 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc   2561662 Nov 23 00:29 log.47493068._004299.job.log.tgz.1
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc        95 Nov 23 00:30 pilot_heartbeat.json
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc      8627 Nov 23 00:30 heartbeat.json
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc      8192 Nov 23 00:31 boinc_mmap_file
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc        29 Nov 23 00:31 wrapper_checkpoint.txt
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc      5069 Nov 23 00:31 pilotlog.txt
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc  12192088 Nov 23 00:31 log.47493068._004299.job.log.1
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc       353 Nov 23 00:31 output.list
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc       620 Nov 23 00:31 runtime_log
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc  14776320 Nov 23 00:31 result.tar.gz
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc       662 Nov 23 00:31 UyUMDm3Ief8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDxFKDmCauXRn.diag
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc      8703 Nov 23 00:31 runtime_log.err
[2025-11-23 00:31:16] -rw-r--r--. 1 boinc boinc     20866 Nov 23 00:31 stderr.txt
[2025-11-23 00:31:16] HITS file was successfully produced:
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc 916272512 Nov 23 00:28 shared/HITS.pool.root.1
[2025-11-23 00:31:16]  *** Contents of shared directory: ***
[2025-11-23 00:31:16] total 1310108
[2025-11-23 00:31:16] -rw-r--r--. 2 boinc boinc 409886089 Nov 21 22:58 ATLAS.root_0
[2025-11-23 00:31:16] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:58 start_atlas.sh
[2025-11-23 00:31:16] -rw-r--r--. 2 boinc boinc    590104 Nov 21 22:58 input.tar.gz
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc 916272512 Nov 23 00:28 HITS.pool.root.1
[2025-11-23 00:31:16] -rw-------. 1 boinc boinc  14776320 Nov 23 00:31 result.tar.gz
00:31:17 (32126): run_atlas exited; CPU time 339347.979875
00:31:17 (32126): called boinc_finish(0)

</stderr_txt>
]]>

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