Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:00 (205478): wrapper (7.7.26015): starting
20:53:00 (205478): wrapper: running run_atlas (--nthreads 2)
[2025-11-20 20:53:00] Arguments: --nthreads 2
[2025-11-20 20:53:00] Threads: 2
[2025-11-20 20:53:00] Checking for CVMFS
[2025-11-20 20:53:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:53:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:53:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:53:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:53:00] 2.9.2.0 2892 1527 53716 153088 1 81 31753789 36864000 651 130560 0 608050 99.959 162983 24231 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 20:53:00] CVMFS is ok
[2025-11-20 20:53:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 20:53:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 20:53:00] Further information can be found at the LHC@home message board.
[2025-11-20 20:53:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:53:00] Checking for apptainer binary...
[2025-11-20 20:53:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:53:00] Running /usr/bin/apptainer --version
[2025-11-20 20:53:00] apptainer version 1.4.1-1.1
[2025-11-20 20:53:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:53:00] belleA267a
[2025-11-20 20:53:00] apptainer works
[2025-11-20 20:53:00] Set ATHENA_PROC_NUMBER=2
[2025-11-20 20:53:00] Set ATHENA_CORE_NUMBER=2
[2025-11-20 20:53:00] Starting ATLAS job with PandaID=6891584517
[2025-11-20 20:53:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:05:20]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:05:20] 2025-11-21 08:04:47,567 | INFO     | mean y: 2039081.6027777777
[2025-11-21 09:05:20] 2025-11-21 08:04:47,567 | INFO     | intersect: -1016106285.6771998
[2025-11-21 09:05:20] 2025-11-21 08:04:47,568 | INFO     | chi2: 3.985926133388981
[2025-11-21 09:05:20] 2025-11-21 08:04:47,568 | INFO     | sum of square deviations: 113343260030.0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,572 | INFO     | sum of deviations: 157325795827.00006
[2025-11-21 09:05:20] 2025-11-21 08:04:47,572 | INFO     | mean x: 1763690182.0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,572 | INFO     | mean y: 2044832.318881119
[2025-11-21 09:05:20] 2025-11-21 08:04:47,572 | INFO     | intersect: -2446040403.644634
[2025-11-21 09:05:20] 2025-11-21 08:04:47,573 | INFO     | chi2: 2.531926899698002
[2025-11-21 09:05:20] 2025-11-21 08:04:47,573 | INFO     | current chi2=2.531926899698002 (change=36.47832862509007 %)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,573 | INFO     | sum of square deviations: 110982015757.5
[2025-11-21 09:05:20] 2025-11-21 08:04:47,577 | INFO     | sum of deviations: 155387085683.50003
[2025-11-21 09:05:20] 2025-11-21 08:04:47,577 | INFO     | mean x: 1763690029.5
[2025-11-21 09:05:20] 2025-11-21 08:04:47,577 | INFO     | mean y: 2044707.1056338027
[2025-11-21 09:05:20] 2025-11-21 08:04:47,577 | INFO     | intersect: -2467316223.6948233
[2025-11-21 09:05:20] 2025-11-21 08:04:47,578 | INFO     | chi2: 2.5321326790496563
[2025-11-21 09:05:20] 2025-11-21 08:04:47,578 | INFO     | current chi2=2.5321326790496563 (change=-0.008127381232003825 %)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,578 | INFO     | right removable region: 709
[2025-11-21 09:05:20] 2025-11-21 08:04:47,578 | INFO     | sum of square deviations: 113343260030.0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,582 | INFO     | sum of deviations: -68758189657.00002
[2025-11-21 09:05:20] 2025-11-21 08:04:47,582 | INFO     | mean x: 1763690487.0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,582 | INFO     | mean y: 2047706.8657342657
[2025-11-21 09:05:20] 2025-11-21 08:04:47,582 | INFO     | intersect: 1071967214.8214357
[2025-11-21 09:05:20] 2025-11-21 08:04:47,583 | INFO     | chi2: 1.9277506062750889
[2025-11-21 09:05:20] 2025-11-21 08:04:47,583 | INFO     | current chi2=1.9277506062750889 (change=51.63606796104763 %)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,583 | INFO     | sum of square deviations: 110982015757.5
[2025-11-21 09:05:20] 2025-11-21 08:04:47,587 | INFO     | sum of deviations: -109020866062.50003
[2025-11-21 09:05:20] 2025-11-21 08:04:47,587 | INFO     | mean x: 1763690639.5
[2025-11-21 09:05:20] 2025-11-21 08:04:47,587 | INFO     | mean y: 2050298.3788732395
[2025-11-21 09:05:20] 2025-11-21 08:04:47,588 | INFO     | intersect: 1734574975.2125666
[2025-11-21 09:05:20] 2025-11-21 08:04:47,588 | INFO     | chi2: 1.6155963833044489
[2025-11-21 09:05:20] 2025-11-21 08:04:47,588 | INFO     | current chi2=1.6155963833044489 (change=16.192666310389725 %)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,588 | INFO     | left removable region: 20
[2025-11-21 09:05:20] 2025-11-21 08:04:47,588 | INFO     | sum of square deviations: 101422701640.0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,592 | INFO     | sum of deviations: -32286162289.000004
[2025-11-21 09:05:20] 2025-11-21 08:04:47,592 | INFO     | mean x: 1763690609.0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,592 | INFO     | mean y: 2057028.18287373
[2025-11-21 09:05:20] 2025-11-21 08:04:47,592 | INFO     | intersect: 563497418.8350356
[2025-11-21 09:05:20] 2025-11-21 08:04:47,592 | INFO     | chi2: 0.1374192977227811
[2025-11-21 09:05:20] 2025-11-21 08:04:47,592 | INFO     | current memory leak: -0.32 B/s (using 689 data points, chi2=0.14)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | could have reported an average CPU frequency of 4535 MHz (28 samples)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | ..............................
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . Timing measurements:
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . get job = 0 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . initial setup = 1 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . payload setup = 2 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . stage-in = 0 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . payload execution = 43879 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . stage-out = 0 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | . log creation = 0 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,593 | INFO     | ..............................
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | 
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | job summary report
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | --------------------------------------------------
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | PanDA job id: 6891584517
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | task id: 47493068
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | errors: (none)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | pilot state: finished 
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | transexitcode: 0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | exeerrorcode: 0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,621 | INFO     | exeerrordiag: 
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | exitcode: 0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | exitmsg: OK
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | cpuconsumptiontime: 86948 s
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | nevents: 1000
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | neventsw: 0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | pid: 215612
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | pgrp: 215612
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | corecount: 2
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | event service: False
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | sizes: {0: 2298799, 2: 2299061, 10: 2299089, 43886: 2345102, 43887: 2354158, 43889: 2354348}
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | --------------------------------------------------
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | 
[2025-11-21 09:05:20] 2025-11-21 08:04:47,622 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | job 6891584517 has completed (purged errors)
[2025-11-21 09:05:20] 2025-11-21 08:04:47,633 | INFO     | overall cleanup function is called
[2025-11-21 09:05:20] 2025-11-21 08:04:48,640 | INFO     | --- collectZombieJob: --- 10, [215612]
[2025-11-21 09:05:20] 2025-11-21 08:04:48,640 | INFO     | zombie collector waiting for pid 215612
[2025-11-21 09:05:20] 2025-11-21 08:04:48,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:05:20] 2025-11-21 08:04:48,640 | INFO     | collected zombie processes
[2025-11-21 09:05:20] 2025-11-21 08:04:48,640 | INFO     | will attempt to kill all subprocesses of pid=215612
[2025-11-21 09:05:20] 2025-11-21 08:04:48,669 | INFO     | process IDs to be killed: [215612] (in reverse order)
[2025-11-21 09:05:20] 2025-11-21 08:04:48,690 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:05:20] 2025-11-21 08:04:48,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:05:20] 2025-11-21 08:04:48,691 | INFO     | did not find any defunct processes belonging to 215612
[2025-11-21 09:05:20] 2025-11-21 08:04:48,692 | INFO     | did not find any defunct processes belonging to 215612
[2025-11-21 09:05:20] 2025-11-21 08:04:48,692 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:05:20] 2025-11-21 08:04:48,692 | INFO     | ready for new job
[2025-11-21 09:05:20] 2025-11-21 08:04:48,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:05:20] 2025-11-21 08:04:48,694 | INFO     | ***************************************
[2025-11-21 09:05:20] 2025-11-21 08:04:48,694 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:05:20] 2025-11-21 08:04:48,694 | INFO     | ***************************************
[2025-11-21 09:05:20] 2025-11-21 08:04:48,694 | INFO     | 
[2025-11-21 09:05:20] 2025-11-21 08:04:48,694 | INFO     | architecture information:
[2025-11-21 09:05:20] 2025-11-21 08:04:48,694 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:05:20] 2025-11-21 08:04:48,702 | INFO     | cat /etc/os-release:
[2025-11-21 09:05:20] NAME="CentOS Linux"
[2025-11-21 09:05:20] VERSION="7 (Core)"
[2025-11-21 09:05:20] ID="centos"
[2025-11-21 09:05:20] ID_LIKE="rhel fedora"
[2025-11-21 09:05:20] VERSION_ID="7"
[2025-11-21 09:05:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:05:20] ANSI_COLOR="0;31"
[2025-11-21 09:05:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:05:20] HOME_URL="https://www.centos.org/"
[2025-11-21 09:05:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:05:20] 
[2025-11-21 09:05:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:05:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:05:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:05:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:05:20] 
[2025-11-21 09:05:20] 2025-11-21 08:04:48,703 | INFO     | ***************************************
[2025-11-21 09:05:20] 2025-11-21 08:04:48,930 | WARNING  | process 215612 can no longer be monitored (due to stat problems) - aborting
[2025-11-21 09:05:20] 2025-11-21 08:04:48,954 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:05:20] 2025-11-21 08:04:48,954 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:05:20] 2025-11-21 08:04:48,954 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-11-21 09:05:20] 2025-11-21 08:04:48,954 | WARNING  | maxPSS not found in memory monitor output
[2025-11-21 09:05:20] 2025-11-21 08:04:48,954 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6891584517/payload.stdout) since it has not been created yet
[2025-11-21 09:05:20] 2025-11-21 08:04:48,954 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 09:05:20] 2025-11-21 08:04:48,964 | INFO     | sufficient remaining disk space (278037266432 B)
[2025-11-21 09:05:20] 2025-11-21 08:04:48,964 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-11-21 09:05:20] 2025-11-21 08:04:48,964 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6891584517/HITS.47493068._004640.pool.root.1 since it does not exist
[2025-11-21 09:05:20] 2025-11-21 08:04:48,994 | INFO     | number of running child processes to parent process 215612: 1
[2025-11-21 09:05:20] 2025-11-21 08:04:48,995 | INFO     | maximum number of monitored processes: 8
[2025-11-21 09:05:20] 2025-11-21 08:04:48,995 | INFO     | aborting job monitoring since job object (job id=6891584517) has expired
[2025-11-21 09:05:20] 2025-11-21 08:04:49,205 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 09:05:20] 2025-11-21 08:04:49,214 | INFO     | sufficient remaining disk space (278037266432 B)
[2025-11-21 09:05:20] 2025-11-21 08:04:49,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:05:20] 2025-11-21 08:04:49,215 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:05:20] 2025-11-21 08:04:49,215 | INFO     | update_server=False
[2025-11-21 09:05:20] 2025-11-21 08:04:49,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:05:20] 2025-11-21 08:04:49,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:05:20] 2025-11-21 08:04:49,215 | INFO     | will abort loop
[2025-11-21 09:05:20] 2025-11-21 08:04:49,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:05:20] 2025-11-21 08:04:49,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:05:20] 2025-11-21 08:04:49,382 | INFO     | all job control threads have been joined
[2025-11-21 09:05:20] 2025-11-21 08:04:49,496 | INFO     | all data control threads have been joined
[2025-11-21 09:05:20] 2025-11-21 08:04:50,196 | INFO     | all payload control threads have been joined
[2025-11-21 09:05:20] 2025-11-21 08:04:50,220 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:50,220 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:50,220 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:50,330 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:50,387 | INFO     | [job] control thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:50,499 | INFO     | [data] control thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:50,779 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:51,189 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:51,201 | INFO     | [payload] control thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:51,220 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:51,282 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:51,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:05:20] 2025-11-21 08:04:51,566 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:51,636 | INFO     | [job] validate thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:51,711 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:04:55,315 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:05:00,195 | INFO     | job.realtimelogging is not enabled
[2025-11-21 09:05:20] 2025-11-21 08:05:01,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:05:20] 2025-11-21 08:05:07,940 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:05:20] 2025-11-21 08:05:09,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279959344960)>', '<ExcThread(monitor, started 140279336138496)>']
[2025-11-21 09:05:20] 2025-11-21 08:05:14,812 | INFO     | all workflow threads have been joined
[2025-11-21 09:05:20] 2025-11-21 08:05:14,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:05:20] 2025-11-21 08:05:14,812 | INFO     | traces error code: 0
[2025-11-21 09:05:20] 2025-11-21 08:05:14,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:05:20] 2025-11-21 08:05:20,130 | INFO     | PID=209184 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 09:05:20] 2025-11-21 08:05:20,130 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:05:20] 2025-11-21 08:05:20,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:05:20] 2025-11-21 08:05:20,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:05:20] 2025-11-21 08:05:20,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:05:20] 2025-11-21 08:05:20,131 | INFO     | [monitor] control thread has ended
[2025-11-21 09:05:20] 2025-11-21 08:05:20,169 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:05:20] 2025-11-21 08:05:20,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:05:20] 2025-11-21 08:05:20,174 [wrapper] pilotpid: 209184
[2025-11-21 09:05:20] 2025-11-21 08:05:20,177 [wrapper] Pilot exit status: 0
[2025-11-21 09:05:20] 2025-11-21 08:05:20,184 [wrapper] pandaids: 6891584517
[2025-11-21 09:05:20] 2025-11-21 08:05:20,198 [wrapper] cleanup supervisor_pilot  292022 209185
[2025-11-21 09:05:20] 2025-11-21 08:05:20,200 [wrapper] Test setup, not cleaning
[2025-11-21 09:05:20] 2025-11-21 08:05:20,203 [wrapper] apfmon messages muted
[2025-11-21 09:05:20] 2025-11-21 08:05:20,205 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:05:20] 2025-11-21 08:05:20,208 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:05:20]  *** Error codes and diagnostics ***
[2025-11-21 09:05:20]     "exeErrorCode": 0,
[2025-11-21 09:05:20]     "exeErrorDiag": "",
[2025-11-21 09:05:20]     "pilotErrorCode": 0,
[2025-11-21 09:05:20]     "pilotErrorDiag": "",
[2025-11-21 09:05:20]  *** Listing of results directory ***
[2025-11-21 09:05:20] total 1303068
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:18 queuedata.json
[2025-11-21 09:05:20] -rwx------ 1 boinc boinc     36292 Nov 18 18:19 runpilot2-wrapper.sh
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc       100 Nov 20 20:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:05:20] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 20:52 run_atlas
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc       105 Nov 20 20:52 job.xml
[2025-11-21 09:05:20] -rw-r--r-- 2 boinc boinc 409551589 Nov 20 20:53 EVNT.47493065._000464.pool.root.1
[2025-11-21 09:05:20] drwxrwx--x 2 boinc boinc      4096 Nov 20 20:53 shared
[2025-11-21 09:05:20] -rw-r--r-- 2 boinc boinc    590101 Nov 20 20:53 input.tar.gz
[2025-11-21 09:05:20] -rw-r--r-- 2 boinc boinc     15120 Nov 20 20:53 start_atlas.sh
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc         0 Nov 20 20:53 boinc_setup_complete
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc      6207 Nov 20 20:53 init_data.xml
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc         0 Nov 20 20:53 boinc_lockfile
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc      2773 Nov 20 20:53 pandaJob.out
[2025-11-21 09:05:20] -rw------- 1 boinc boinc    989440 Nov 20 20:53 agis_schedconf.cvmfs.json
[2025-11-21 09:05:20] drwx------ 5 boinc boinc      4096 Nov 20 20:53 pilot3
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc       532 Nov 21 09:01 boinc_task_state.xml
[2025-11-21 09:05:20] -rw------- 1 boinc boinc 906120094 Nov 21 09:04 HITS.47493068._004640.pool.root.1
[2025-11-21 09:05:20] -rw------- 1 boinc boinc      1026 Nov 21 09:04 memory_monitor_summary.json
[2025-11-21 09:05:20] -rw------- 1 boinc boinc   1526164 Nov 21 09:04 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:05:20] -rw------- 1 boinc boinc   1223835 Nov 21 09:04 log.47493068._004640.job.log.tgz.1
[2025-11-21 09:05:20] -rw------- 1 boinc boinc      8579 Nov 21 09:04 heartbeat.json
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc      8192 Nov 21 09:05 boinc_mmap_file
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc        28 Nov 21 09:05 wrapper_checkpoint.txt
[2025-11-21 09:05:20] -rw------- 1 boinc boinc       746 Nov 21 09:05 pilotlog.txt
[2025-11-21 09:05:20] -rw------- 1 boinc boinc        95 Nov 21 09:05 pilot_heartbeat.json
[2025-11-21 09:05:20] -rw------- 1 boinc boinc   6154100 Nov 21 09:05 log.47493068._004640.job.log.1
[2025-11-21 09:05:20] -rw------- 1 boinc boinc       353 Nov 21 09:05 output.list
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc       620 Nov 21 09:05 runtime_log
[2025-11-21 09:05:20] -rw------- 1 boinc boinc   7393280 Nov 21 09:05 result.tar.gz
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc      8798 Nov 21 09:05 runtime_log.err
[2025-11-21 09:05:20] -rw------- 1 boinc boinc       669 Nov 21 09:05 7gkNDmXXef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmG0FKDmTTZVRm.diag
[2025-11-21 09:05:20] -rw-r--r-- 1 boinc boinc     21573 Nov 21 09:05 stderr.txt
[2025-11-21 09:05:20] HITS file was successfully produced:
[2025-11-21 09:05:20] -rw------- 1 boinc boinc 906120094 Nov 21 09:04 shared/HITS.pool.root.1
[2025-11-21 09:05:20]  *** Contents of shared directory: ***
[2025-11-21 09:05:20] total 1292664
[2025-11-21 09:05:20] -rw-r--r-- 2 boinc boinc 409551589 Nov 20 20:53 ATLAS.root_0
[2025-11-21 09:05:20] -rw-r--r-- 2 boinc boinc    590101 Nov 20 20:53 input.tar.gz
[2025-11-21 09:05:20] -rw-r--r-- 2 boinc boinc     15120 Nov 20 20:53 start_atlas.sh
[2025-11-21 09:05:20] -rw------- 1 boinc boinc 906120094 Nov 21 09:04 HITS.pool.root.1
[2025-11-21 09:05:20] -rw------- 1 boinc boinc   7393280 Nov 21 09:05 result.tar.gz
09:05:21 (205478): run_atlas exited; CPU time 87055.797039
09:05:21 (205478): called boinc_finish(0)

</stderr_txt>
]]>

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