Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:09 (15730): wrapper (7.7.26015): starting
21:45:09 (15730): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:45:09] Arguments: --nthreads 8
[2025-11-21 21:45:09] Threads: 8
[2025-11-21 21:45:09] Checking for CVMFS
[2025-11-21 21:45:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:45:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:45:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:45:11] 2.11.2.0 32703 278493 142192 153142 2 230 15833464 25165825 4364 130560 2 136558255 99.874 77199248 3051 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 21:45:11] CVMFS is ok
[2025-11-21 21:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:45:11] Checking for apptainer binary...
[2025-11-21 21:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:45:11] Running /usr/bin/apptainer --version
[2025-11-21 21:45:11] apptainer version 1.3.2-1.el7
[2025-11-21 21:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:45:20] cg-vwn328.simple-grid.lan
[2025-11-21 21:45:20] apptainer works
[2025-11-21 21:45:20] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:45:20] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:45:20] Starting ATLAS job with PandaID=6891584308
[2025-11-21 21:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:55:48]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:55:48] 2025-11-22 21:54:31,970 | INFO     | PID=19495 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:55:48] 2025-11-22 21:54:31,970 | INFO     | .. there are 9 such processes running
[2025-11-22 22:55:48] 2025-11-22 21:54:32,976 | INFO     | time since job start (90391s) is within the limit (172800.0s)
[2025-11-22 22:55:48] 2025-11-22 21:54:33,905 | INFO     | monitor loop #6060: job 0:6891584308 is in state 'finished'
[2025-11-22 22:55:48] 2025-11-22 21:54:33,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:55:48] 2025-11-22 21:54:34,983 | INFO     | time since job start (90393s) is within the limit (172800.0s)
[2025-11-22 22:55:48] 2025-11-22 21:54:36,410 | INFO     | monitor loop #6061: job 0:6891584308 is in state 'finished'
[2025-11-22 22:55:48] 2025-11-22 21:54:36,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:55:48] 2025-11-22 21:54:36,993 | INFO     | time since job start (90395s) is within the limit (172800.0s)
[2025-11-22 22:55:48] 2025-11-22 21:54:38,915 | INFO     | monitor loop #6062: job 0:6891584308 is in state 'finished'
[2025-11-22 22:55:48] 2025-11-22 21:54:38,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:55:48] 2025-11-22 21:54:39,001 | INFO     | time since job start (90398s) is within the limit (172800.0s)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,008 | INFO     | time since job start (90400s) is within the limit (172800.0s)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,144 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 22:55:48] 2025-11-22 21:54:41,146 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 22:55:48] 2025-11-22 21:54:41,148 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6891584308/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,148 | INFO     | extracted standard info from prmon json
[2025-11-22 22:55:48] 2025-11-22 21:54:41,149 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:55:48] 2025-11-22 21:54:41,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:55:48] 2025-11-22 21:54:41,179 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:55:48] 2025-11-22 21:54:41,182 | INFO     | sum of square deviations: 989009624024.2598
[2025-11-22 22:55:48] 2025-11-22 21:54:41,247 | INFO     | sum of deviations: 2675057702995.9287
[2025-11-22 22:55:48] 2025-11-22 21:54:41,247 | INFO     | mean x: 1763803463.8036685
[2025-11-22 22:55:48] 2025-11-22 21:54:41,247 | INFO     | mean y: 2834388.6813858696
[2025-11-22 22:55:48] 2025-11-22 21:54:41,247 | INFO     | intersect: -4767873527.405756
[2025-11-22 22:55:48] 2025-11-22 21:54:41,249 | INFO     | chi2: 28.482737491128315
[2025-11-22 22:55:48] 2025-11-22 21:54:41,251 | INFO     | sum of square deviations: 978966151220.7333
[2025-11-22 22:55:48] 2025-11-22 21:54:41,313 | INFO     | sum of deviations: 3158466282163.9346
[2025-11-22 22:55:48] 2025-11-22 21:54:41,314 | INFO     | mean x: 1763803311.308112
[2025-11-22 22:55:48] 2025-11-22 21:54:41,314 | INFO     | mean y: 2841727.7368779825
[2025-11-22 22:55:48] 2025-11-22 21:54:41,314 | INFO     | intersect: -5687766962.041675
[2025-11-22 22:55:48] 2025-11-22 21:54:41,316 | INFO     | chi2: 25.210426608382548
[2025-11-22 22:55:48] 2025-11-22 21:54:41,316 | INFO     | current chi2=25.210426608382548 (change=11.488751331451246 %)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,317 | INFO     | right removable region: 1466
[2025-11-22 22:55:48] 2025-11-22 21:54:41,319 | INFO     | sum of square deviations: 978964980630.7336
[2025-11-22 22:55:48] 2025-11-22 21:54:41,378 | INFO     | sum of deviations: 2060942846557.689
[2025-11-22 22:55:48] 2025-11-22 21:54:41,378 | INFO     | mean x: 1763803616.308112
[2025-11-22 22:55:48] 2025-11-22 21:54:41,379 | INFO     | mean y: 2843712.126789366
[2025-11-22 22:55:48] 2025-11-22 21:54:41,379 | INFO     | intersect: -3710362089.597336
[2025-11-22 22:55:48] 2025-11-22 21:54:41,381 | INFO     | chi2: 23.87207848885755
[2025-11-22 22:55:48] 2025-11-22 21:54:41,381 | INFO     | current chi2=23.87207848885755 (change=16.18755572109905 %)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,381 | INFO     | left removable region: 10
[2025-11-22 22:55:48] 2025-11-22 21:54:41,383 | INFO     | sum of square deviations: 957108025532.7686
[2025-11-22 22:55:48] 2025-11-22 21:54:41,432 | INFO     | monitor loop #6063: job 0:6891584308 is in state 'finished'
[2025-11-22 22:55:48] 2025-11-22 21:54:41,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,441 | INFO     | sum of deviations: 2104917597108.6494
[2025-11-22 22:55:48] 2025-11-22 21:54:41,442 | INFO     | mean x: 1763803585.8179946
[2025-11-22 22:55:48] 2025-11-22 21:54:41,442 | INFO     | mean y: 2861187.4024725277
[2025-11-22 22:55:48] 2025-11-22 21:54:41,442 | INFO     | intersect: -3876179742.763171
[2025-11-22 22:55:48] 2025-11-22 21:54:41,444 | INFO     | chi2: 16.20713387220586
[2025-11-22 22:55:48] 2025-11-22 21:54:41,444 | INFO     | current memory leak: 2.20 B/s (using 1456 data points, chi2=16.21)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,446 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | ..............................
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . Timing measurements:
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . get job = 0 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . initial setup = 9 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . payload setup = 171 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . stage-in = 0 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . payload execution = 89945 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . stage-out = 5 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,447 | INFO     | . log creation = 2 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,448 | INFO     | ..............................
[2025-11-22 22:55:48] 2025-11-22 21:54:41,614 | INFO     | 
[2025-11-22 22:55:48] 2025-11-22 21:54:41,614 | INFO     | job summary report
[2025-11-22 22:55:48] 2025-11-22 21:54:41,614 | INFO     | --------------------------------------------------
[2025-11-22 22:55:48] 2025-11-22 21:54:41,614 | INFO     | PanDA job id: 6891584308
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | task id: 47493068
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | errors: (none)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | pilot state: finished 
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | transexitcode: 0
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | exeerrorcode: 0
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | exeerrordiag: 
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | exitcode: 0
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | exitmsg: OK
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | cpuconsumptiontime: 332597 s
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | nevents: 1000
[2025-11-22 22:55:48] 2025-11-22 21:54:41,615 | INFO     | neventsw: 0
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | pid: 26054
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | pgrp: 26054
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | corecount: 8
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | event service: False
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | sizes: {0: 2298563, 1: 2298647, 2: 2298846, 13: 2298846, 23: 2298902, 34: 2298930, 45: 2299086, 56: 2299114, 67: 2299142, 77: 2299170, 88: 2299226, 96: 2299796, 99
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | --------------------------------------------------
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | 
[2025-11-22 22:55:48] 2025-11-22 21:54:41,616 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-22 22:55:48] 2025-11-22 21:54:41,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,710 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:55:48] 2025-11-22 21:54:41,711 | INFO     | job 6891584308 has completed (purged errors)
[2025-11-22 22:55:48] 2025-11-22 21:54:41,711 | INFO     | overall cleanup function is called
[2025-11-22 22:55:48] 2025-11-22 21:54:42,730 | INFO     | --- collectZombieJob: --- 10, [26054]
[2025-11-22 22:55:48] 2025-11-22 21:54:42,730 | INFO     | zombie collector waiting for pid 26054
[2025-11-22 22:55:48] 2025-11-22 21:54:42,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:55:48] 2025-11-22 21:54:42,731 | INFO     | collected zombie processes
[2025-11-22 22:55:48] 2025-11-22 21:54:42,731 | INFO     | will attempt to kill all subprocesses of pid=26054
[2025-11-22 22:55:48] 2025-11-22 21:54:42,832 | INFO     | process IDs to be killed: [26054] (in reverse order)
[2025-11-22 22:55:48] 2025-11-22 21:54:43,322 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:55:48] 2025-11-22 21:54:43,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:55:48] 2025-11-22 21:54:43,326 | INFO     | did not find any defunct processes belonging to 26054
[2025-11-22 22:55:48] 2025-11-22 21:54:43,330 | INFO     | did not find any defunct processes belonging to 26054
[2025-11-22 22:55:48] 2025-11-22 21:54:43,376 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:55:48] 2025-11-22 21:54:43,377 | INFO     | ready for new job
[2025-11-22 22:55:48] 2025-11-22 21:54:43,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:55:48] 2025-11-22 21:54:43,383 | INFO     | ***************************************
[2025-11-22 22:55:48] 2025-11-22 21:54:43,384 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:55:48] 2025-11-22 21:54:43,384 | INFO     | ***************************************
[2025-11-22 22:55:48] 2025-11-22 21:54:43,384 | INFO     | 
[2025-11-22 22:55:48] 2025-11-22 21:54:43,385 | INFO     | pilot is running in a VM
[2025-11-22 22:55:48] 2025-11-22 21:54:43,385 | INFO     | architecture information:
[2025-11-22 22:55:48] 2025-11-22 21:54:43,394 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:55:48] 2025-11-22 21:54:43,626 | INFO     | cat /etc/os-release:
[2025-11-22 22:55:48] NAME="CentOS Linux"
[2025-11-22 22:55:48] VERSION="7 (Core)"
[2025-11-22 22:55:48] ID="centos"
[2025-11-22 22:55:48] ID_LIKE="rhel fedora"
[2025-11-22 22:55:48] VERSION_ID="7"
[2025-11-22 22:55:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:55:48] ANSI_COLOR="0;31"
[2025-11-22 22:55:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:55:48] HOME_URL="https://www.centos.org/"
[2025-11-22 22:55:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:55:48] 
[2025-11-22 22:55:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:55:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:55:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:55:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:55:48] 
[2025-11-22 22:55:48] 2025-11-22 21:54:43,626 | INFO     | ***************************************
[2025-11-22 22:55:48] 2025-11-22 21:54:44,129 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-22 22:55:48] 2025-11-22 21:54:44,313 | INFO     | sufficient remaining disk space (494980300800 B)
[2025-11-22 22:55:48] 2025-11-22 21:54:44,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:55:48] 2025-11-22 21:54:44,314 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:55:48] 2025-11-22 21:54:44,314 | INFO     | update_server=False
[2025-11-22 22:55:48] 2025-11-22 21:54:44,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:55:48] 2025-11-22 21:54:44,361 | INFO     | all data control threads have been joined
[2025-11-22 22:55:48] 2025-11-22 21:54:44,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:55:48] 2025-11-22 21:54:44,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:55:48] 2025-11-22 21:54:44,942 | INFO     | aborting loop
[2025-11-22 22:55:48] 2025-11-22 21:54:45,122 | INFO     | all payload control threads have been joined
[2025-11-22 22:55:48] 2025-11-22 21:54:45,320 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:45,325 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:45,367 | INFO     | [data] control thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:45,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:55:48] 2025-11-22 21:54:45,672 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:45,673 | INFO     | all job control threads have been joined
[2025-11-22 22:55:48] 2025-11-22 21:54:45,782 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:45,948 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:45,997 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:46,128 | INFO     | [payload] control thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:46,145 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:46,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:55:48] 2025-11-22 21:54:46,622 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:46,679 | INFO     | [job] control thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:46,815 | INFO     | [job] validate thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:46,914 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:47,609 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:49,432 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:54:54,535 | INFO     | job.realtimelogging is not enabled
[2025-11-22 22:55:48] 2025-11-22 21:54:55,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:55:48] 2025-11-22 21:55:14,177 | INFO     | PID=19495 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:55:48] 2025-11-22 21:55:14,177 | INFO     | .. there are 9 such processes running
[2025-11-22 22:55:48] 2025-11-22 21:55:14,178 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:55:48] 2025-11-22 21:55:14,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:55:48] 2025-11-22 21:55:14,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:55:48] 2025-11-22 21:55:38,477 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:55:48] 2025-11-22 21:55:38,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963902551872)>', '<ExcThread(monitor, started 139963605686016)>']
[2025-11-22 22:55:48] 2025-11-22 21:55:39,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:55:48] 2025-11-22 21:55:39,328 | INFO     | [monitor] control thread has ended
[2025-11-22 22:55:48] 2025-11-22 21:55:43,973 | INFO     | all workflow threads have been joined
[2025-11-22 22:55:48] 2025-11-22 21:55:43,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:55:48] 2025-11-22 21:55:43,974 | INFO     | traces error code: 0
[2025-11-22 22:55:48] 2025-11-22 21:55:43,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:55:48] 2025-11-22 21:55:44,541 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:55:48] 2025-11-22 21:55:44,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:55:48] 2025-11-22 21:55:44,739 [wrapper] pilotpid: 19495
[2025-11-22 22:55:48] 2025-11-22 21:55:44,851 [wrapper] Pilot exit status: 0
[2025-11-22 22:55:48] 2025-11-22 21:55:45,341 [wrapper] pandaids: 6891584308
[2025-11-22 22:55:48] 2025-11-22 21:55:46,420 [wrapper] cleanup supervisor_pilot 21679 19496
[2025-11-22 22:55:48] 2025-11-22 21:55:46,449 [wrapper] Test setup, not cleaning
[2025-11-22 22:55:48] 2025-11-22 21:55:46,518 [wrapper] apfmon messages muted
[2025-11-22 22:55:48] 2025-11-22 21:55:46,620 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:55:48] 2025-11-22 21:55:46,743 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:55:48]  *** Error codes and diagnostics ***
[2025-11-22 22:55:49]     "exeErrorCode": 0,
[2025-11-22 22:55:49]     "exeErrorDiag": "",
[2025-11-22 22:55:49]     "pilotErrorCode": 0,
[2025-11-22 22:55:49]     "pilotErrorDiag": "",
[2025-11-22 22:55:49]  *** Listing of results directory ***
[2025-11-22 22:55:49] total 1312544
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-22 22:55:49] -rwx------. 1 boinc boinc     36292 Nov 18 18:13 runpilot2-wrapper.sh
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:13 queuedata.json
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc       100 Nov 21 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:55:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 21:45 run_atlas
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc       105 Nov 21 21:45 job.xml
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc      6391 Nov 21 21:45 init_data.xml
[2025-11-22 22:55:49] -rw-r--r--. 2 boinc boinc 407449453 Nov 21 21:45 EVNT.47493065._000456.pool.root.1
[2025-11-22 22:55:49] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:45 start_atlas.sh
[2025-11-22 22:55:49] drwxrwx--x. 2 boinc boinc        68 Nov 21 21:45 shared
[2025-11-22 22:55:49] -rw-r--r--. 2 boinc boinc    590097 Nov 21 21:45 input.tar.gz
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc         0 Nov 21 21:45 boinc_lockfile
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc      2770 Nov 21 21:45 pandaJob.out
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc    989798 Nov 21 21:47 agis_schedconf.cvmfs.json
[2025-11-22 22:55:49] drwx------. 5 boinc boinc      4096 Nov 21 21:48 pilot3
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc       533 Nov 22 22:23 boinc_task_state.xml
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc 903562362 Nov 22 22:51 HITS.47493068._004551.pool.root.1
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc      1028 Nov 22 22:53 memory_monitor_summary.json
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc   1526164 Nov 22 22:53 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc   2545407 Nov 22 22:53 log.47493068._004551.job.log.tgz.1
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc      7944 Nov 22 22:54 heartbeat.json
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc        95 Nov 22 22:55 pilot_heartbeat.json
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc        29 Nov 22 22:55 wrapper_checkpoint.txt
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc      8192 Nov 22 22:55 boinc_mmap_file
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc      4956 Nov 22 22:55 pilotlog.txt
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc  12019923 Nov 22 22:55 log.47493068._004551.job.log.1
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc       353 Nov 22 22:55 output.list
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc       620 Nov 22 22:55 runtime_log
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc  14581760 Nov 22 22:55 result.tar.gz
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc      8703 Nov 22 22:55 runtime_log.err
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc       662 Nov 22 22:55 HzlMDmASef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIYFKDmiiib6m.diag
[2025-11-22 22:55:49] -rw-r--r--. 1 boinc boinc     21477 Nov 22 22:55 stderr.txt
[2025-11-22 22:55:49] HITS file was successfully produced:
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc 903562362 Nov 22 22:51 shared/HITS.pool.root.1
[2025-11-22 22:55:49]  *** Contents of shared directory: ***
[2025-11-22 22:55:49] total 1295124
[2025-11-22 22:55:49] -rw-r--r--. 2 boinc boinc 407449453 Nov 21 21:45 ATLAS.root_0
[2025-11-22 22:55:49] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:45 start_atlas.sh
[2025-11-22 22:55:49] -rw-r--r--. 2 boinc boinc    590097 Nov 21 21:45 input.tar.gz
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc 903562362 Nov 22 22:51 HITS.pool.root.1
[2025-11-22 22:55:49] -rw-------. 1 boinc boinc  14581760 Nov 22 22:55 result.tar.gz
22:55:50 (15730): run_atlas exited; CPU time 333120.064865
22:55:50 (15730): called boinc_finish(0)

</stderr_txt>
]]>

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