Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:28 (28681): wrapper (7.7.26015): starting
01:19:28 (28681): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 01:19:28] Arguments: --nthreads 8
[2025-11-22 01:19:28] Threads: 8
[2025-11-22 01:19:28] Checking for CVMFS
[2025-11-22 01:19:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:19:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:19:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:19:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:19:30] 2.11.2.0 11478 278831 142460 153153 3 75 16413149 25165824 4632 130560 2 138987027 99.879 77268006 3251 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 01:19:30] CVMFS is ok
[2025-11-22 01:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:19:30] Checking for apptainer binary...
[2025-11-22 01:19:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 01:19:30] Running /usr/bin/apptainer --version
[2025-11-22 01:19:30] apptainer version 1.3.2-1.el7
[2025-11-22 01:19:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:19:41] cg-vwn355.simple-grid.lan
[2025-11-22 01:19:41] apptainer works
[2025-11-22 01:19:41] Set ATHENA_PROC_NUMBER=8
[2025-11-22 01:19:41] Set ATHENA_CORE_NUMBER=8
[2025-11-22 01:19:41] Starting ATLAS job with PandaID=6891583778
[2025-11-22 01:19:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 02:29:30]  *** The last 200 lines of the pilot log: ***
[2025-11-23 02:29:30] 2025-11-23 01:28:31,552 | INFO     | monitor loop #6059: job 0:6891583778 is in state 'finished'
[2025-11-23 02:29:30] 2025-11-23 01:28:31,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:29:30] 2025-11-23 01:28:32,656 | INFO     | time since job start (90290s) is within the limit (172800.0s)
[2025-11-23 02:29:30] 2025-11-23 01:28:34,059 | INFO     | monitor loop #6060: job 0:6891583778 is in state 'finished'
[2025-11-23 02:29:30] 2025-11-23 01:28:34,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:29:30] 2025-11-23 01:28:34,664 | INFO     | time since job start (90292s) is within the limit (172800.0s)
[2025-11-23 02:29:30] 2025-11-23 01:28:36,567 | INFO     | monitor loop #6061: job 0:6891583778 is in state 'finished'
[2025-11-23 02:29:30] 2025-11-23 01:28:36,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:29:30] 2025-11-23 01:28:36,670 | INFO     | time since job start (90294s) is within the limit (172800.0s)
[2025-11-23 02:29:30] 2025-11-23 01:28:36,915 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 02:29:30] 2025-11-23 01:28:36,916 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 02:29:30] 2025-11-23 01:28:36,918 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6891583778/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 02:29:30] 2025-11-23 01:28:36,919 | INFO     | extracted standard info from prmon json
[2025-11-23 02:29:30] 2025-11-23 01:28:36,919 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 02:29:30] 2025-11-23 01:28:36,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 02:29:30] 2025-11-23 01:28:36,966 | INFO     | fitting pss+swap vs Time
[2025-11-23 02:29:30] 2025-11-23 01:28:36,969 | INFO     | sum of square deviations: 986999807935.7942
[2025-11-23 02:29:30] 2025-11-23 01:28:37,048 | INFO     | sum of deviations: 4273178254086.84
[2025-11-23 02:29:30] 2025-11-23 01:28:37,049 | INFO     | mean x: 1763816372.3480625
[2025-11-23 02:29:30] 2025-11-23 01:28:37,049 | INFO     | mean y: 2848516.576478586
[2025-11-23 02:29:30] 2025-11-23 01:28:37,049 | INFO     | intersect: -7633527606.214395
[2025-11-23 02:29:30] 2025-11-23 01:28:37,051 | INFO     | chi2: 19.081415597632585
[2025-11-23 02:29:30] 2025-11-23 01:28:37,053 | INFO     | sum of square deviations: 976970020024.1742
[2025-11-23 02:29:30] 2025-11-23 01:28:37,121 | INFO     | sum of deviations: 4749897518933.712
[2025-11-23 02:29:30] 2025-11-23 01:28:37,122 | INFO     | mean x: 1763816219.8526604
[2025-11-23 02:29:30] 2025-11-23 01:28:37,122 | INFO     | mean y: 2855763.563437926
[2025-11-23 02:29:30] 2025-11-23 01:28:37,122 | INFO     | intersect: -8572582699.047611
[2025-11-23 02:29:30] 2025-11-23 01:28:37,124 | INFO     | chi2: 16.082109474439616
[2025-11-23 02:29:30] 2025-11-23 01:28:37,124 | INFO     | current chi2=16.082109474439616 (change=15.71846757305098 %)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,124 | INFO     | right removable region: 1465
[2025-11-23 02:29:30] 2025-11-23 01:28:37,127 | INFO     | sum of square deviations: 976968810394.1746
[2025-11-23 02:29:30] 2025-11-23 01:28:37,187 | INFO     | sum of deviations: 3648419341846.77
[2025-11-23 02:29:30] 2025-11-23 01:28:37,188 | INFO     | mean x: 1763816524.8526604
[2025-11-23 02:29:30] 2025-11-23 01:28:37,188 | INFO     | mean y: 2858014.5497953617
[2025-11-23 02:29:30] 2025-11-23 01:28:37,188 | INFO     | intersect: -6583987191.025431
[2025-11-23 02:29:30] 2025-11-23 01:28:37,190 | INFO     | chi2: 14.219735382735676
[2025-11-23 02:29:30] 2025-11-23 01:28:37,190 | INFO     | current chi2=14.219735382735676 (change=25.478613942563534 %)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,193 | INFO     | sum of square deviations: 967006000177.4938
[2025-11-23 02:29:30] 2025-11-23 01:28:37,259 | INFO     | sum of deviations: 3107825115508.8125
[2025-11-23 02:29:30] 2025-11-23 01:28:37,259 | INFO     | mean x: 1763816677.3572896
[2025-11-23 02:29:30] 2025-11-23 01:28:37,260 | INFO     | mean y: 2866288.5482546203
[2025-11-23 02:29:30] 2025-11-23 01:28:37,260 | INFO     | intersect: -5665799436.419466
[2025-11-23 02:29:30] 2025-11-23 01:28:37,262 | INFO     | chi2: 10.692297074687115
[2025-11-23 02:29:30] 2025-11-23 01:28:37,262 | INFO     | current chi2=10.692297074687115 (change=24.8066381905479 %)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,262 | INFO     | left removable region: 20
[2025-11-23 02:29:30] 2025-11-23 01:28:37,264 | INFO     | sum of square deviations: 935582499440.1356
[2025-11-23 02:29:30] 2025-11-23 01:28:37,328 | INFO     | sum of deviations: 3138169409786.9297
[2025-11-23 02:29:30] 2025-11-23 01:28:37,328 | INFO     | mean x: 1763816799.3681662
[2025-11-23 02:29:30] 2025-11-23 01:28:37,328 | INFO     | mean y: 2883884.689965398
[2025-11-23 02:29:30] 2025-11-23 01:28:37,329 | INFO     | intersect: -5913383176.267007
[2025-11-23 02:29:30] 2025-11-23 01:28:37,330 | INFO     | chi2: 4.428987239557821
[2025-11-23 02:29:30] 2025-11-23 01:28:37,331 | INFO     | current memory leak: 3.35 B/s (using 1445 data points, chi2=4.43)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,333 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,333 | INFO     | ..............................
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . Timing measurements:
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . get job = 0 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . initial setup = 11 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . payload setup = 161 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . stage-in = 0 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . payload execution = 89838 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . stage-out = 5 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | . log creation = 1 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,334 | INFO     | ..............................
[2025-11-23 02:29:30] 2025-11-23 01:28:37,463 | INFO     | 
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | job summary report
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | --------------------------------------------------
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | PanDA job id: 6891583778
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | task id: 47493068
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | errors: (none)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | pilot state: finished 
[2025-11-23 02:29:30] 2025-11-23 01:28:37,464 | INFO     | transexitcode: 0
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | exeerrorcode: 0
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | exeerrordiag: 
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | exitcode: 0
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | exitmsg: OK
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | cpuconsumptiontime: 332830 s
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | nevents: 1000
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | neventsw: 0
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | pid: 6624
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | pgrp: 6624
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | corecount: 8
[2025-11-23 02:29:30] 2025-11-23 01:28:37,465 | INFO     | event service: False
[2025-11-23 02:29:30] 2025-11-23 01:28:37,466 | INFO     | sizes: {0: 2298624, 1: 2298823, 2: 2298823, 12: 2298851, 23: 2298879, 34: 2298907, 44: 2299063, 55: 2299091, 66: 2299119, 77: 2299147, 88: 2299203, 98: 2299801, 90
[2025-11-23 02:29:30] 2025-11-23 01:28:37,466 | INFO     | --------------------------------------------------
[2025-11-23 02:29:30] 2025-11-23 01:28:37,466 | INFO     | 
[2025-11-23 02:29:30] 2025-11-23 01:28:37,466 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-23 02:29:30] 2025-11-23 01:28:37,575 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,575 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,575 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,575 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | job 6891583778 has completed (purged errors)
[2025-11-23 02:29:30] 2025-11-23 01:28:37,577 | INFO     | overall cleanup function is called
[2025-11-23 02:29:30] 2025-11-23 01:28:38,596 | INFO     | --- collectZombieJob: --- 10, [6624]
[2025-11-23 02:29:30] 2025-11-23 01:28:38,596 | INFO     | zombie collector waiting for pid 6624
[2025-11-23 02:29:30] 2025-11-23 01:28:38,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 02:29:30] 2025-11-23 01:28:38,597 | INFO     | collected zombie processes
[2025-11-23 02:29:30] 2025-11-23 01:28:38,597 | INFO     | will attempt to kill all subprocesses of pid=6624
[2025-11-23 02:29:30] 2025-11-23 01:28:38,732 | INFO     | process IDs to be killed: [6624] (in reverse order)
[2025-11-23 02:29:30] 2025-11-23 01:28:39,517 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 02:29:30] 2025-11-23 01:28:39,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 02:29:30] 2025-11-23 01:28:39,521 | INFO     | did not find any defunct processes belonging to 6624
[2025-11-23 02:29:30] 2025-11-23 01:28:39,524 | INFO     | did not find any defunct processes belonging to 6624
[2025-11-23 02:29:30] 2025-11-23 01:28:39,526 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 02:29:30] 2025-11-23 01:28:39,526 | INFO     | ready for new job
[2025-11-23 02:29:30] 2025-11-23 01:28:39,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 02:29:30] 2025-11-23 01:28:39,533 | INFO     | ***************************************
[2025-11-23 02:29:30] 2025-11-23 01:28:39,533 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 02:29:30] 2025-11-23 01:28:39,533 | INFO     | ***************************************
[2025-11-23 02:29:30] 2025-11-23 01:28:39,534 | INFO     | 
[2025-11-23 02:29:30] 2025-11-23 01:28:39,534 | INFO     | pilot is running in a VM
[2025-11-23 02:29:30] 2025-11-23 01:28:39,534 | INFO     | architecture information:
[2025-11-23 02:29:30] 2025-11-23 01:28:39,535 | INFO     | executing command: cat /etc/os-release
[2025-11-23 02:29:30] 2025-11-23 01:28:39,718 | INFO     | cat /etc/os-release:
[2025-11-23 02:29:30] NAME="CentOS Linux"
[2025-11-23 02:29:30] VERSION="7 (Core)"
[2025-11-23 02:29:30] ID="centos"
[2025-11-23 02:29:30] ID_LIKE="rhel fedora"
[2025-11-23 02:29:30] VERSION_ID="7"
[2025-11-23 02:29:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 02:29:30] ANSI_COLOR="0;31"
[2025-11-23 02:29:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 02:29:30] HOME_URL="https://www.centos.org/"
[2025-11-23 02:29:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 02:29:30] 
[2025-11-23 02:29:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 02:29:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 02:29:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 02:29:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 02:29:30] 
[2025-11-23 02:29:30] 2025-11-23 01:28:39,719 | INFO     | ***************************************
[2025-11-23 02:29:30] 2025-11-23 01:28:40,222 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-23 02:29:30] 2025-11-23 01:28:40,497 | INFO     | sufficient remaining disk space (495031681024 B)
[2025-11-23 02:29:30] 2025-11-23 01:28:40,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 02:29:30] 2025-11-23 01:28:40,497 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 02:29:30] 2025-11-23 01:28:40,498 | INFO     | update_server=False
[2025-11-23 02:29:30] 2025-11-23 01:28:40,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 02:29:30] 2025-11-23 01:28:40,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:29:30] 2025-11-23 01:28:40,499 | INFO     | aborting loop
[2025-11-23 02:29:30] 2025-11-23 01:28:40,650 | INFO     | all payload control threads have been joined
[2025-11-23 02:29:30] 2025-11-23 01:28:40,834 | INFO     | all data control threads have been joined
[2025-11-23 02:29:30] 2025-11-23 01:28:41,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 02:29:30] 2025-11-23 01:28:41,503 | INFO     | [job] retrieve thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:41,505 | INFO     | [job] job monitor thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:41,656 | INFO     | [payload] control thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:41,693 | INFO     | [payload] validate_post thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:41,715 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:41,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 02:29:30] 2025-11-23 01:28:41,840 | INFO     | [data] control thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:42,105 | INFO     | [job] validate thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:42,187 | INFO     | all job control threads have been joined
[2025-11-23 02:29:30] 2025-11-23 01:28:42,240 | INFO     | [data] copytool_in thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:42,358 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:42,374 | INFO     | [payload] failed_post thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:42,442 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:42,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:29:30] 2025-11-23 01:28:42,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:43,192 | INFO     | [job] control thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:43,484 | INFO     | [job] queue monitor thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:43,786 | INFO     | [data] copytool_out thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:28:45,161 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 02:29:30] 2025-11-23 01:29:09,873 | INFO     | PID=32472 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 02:29:30] 2025-11-23 01:29:09,874 | INFO     | .. there are 9 such processes running
[2025-11-23 02:29:30] 2025-11-23 01:29:09,875 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 02:29:30] 2025-11-23 01:29:09,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 02:29:30] 2025-11-23 01:29:09,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 02:29:30] 2025-11-23 01:29:19,325 | INFO     | [monitor] cgroup control has ended
[2025-11-23 02:29:30] 2025-11-23 01:29:20,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786142926656)>', '<ExcThread(monitor, started 139785834305280)>']
[2025-11-23 02:29:30] 2025-11-23 01:29:20,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 02:29:30] 2025-11-23 01:29:20,943 | INFO     | [monitor] control thread has ended
[2025-11-23 02:29:30] 2025-11-23 01:29:25,492 | INFO     | all workflow threads have been joined
[2025-11-23 02:29:30] 2025-11-23 01:29:25,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 02:29:30] 2025-11-23 01:29:25,493 | INFO     | traces error code: 0
[2025-11-23 02:29:30] 2025-11-23 01:29:25,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 02:29:30] 2025-11-23 01:29:25,834 [wrapper] ==== pilot stdout END ====
[2025-11-23 02:29:30] 2025-11-23 01:29:25,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 02:29:30] 2025-11-23 01:29:26,018 [wrapper] pilotpid: 32472
[2025-11-23 02:29:30] 2025-11-23 01:29:26,096 [wrapper] Pilot exit status: 0
[2025-11-23 02:29:30] 2025-11-23 01:29:26,487 [wrapper] pandaids: 6891583778
[2025-11-23 02:29:30] 2025-11-23 01:29:27,413 [wrapper] cleanup supervisor_pilot  9812 32473
[2025-11-23 02:29:30] 2025-11-23 01:29:27,516 [wrapper] Test setup, not cleaning
[2025-11-23 02:29:30] 2025-11-23 01:29:27,571 [wrapper] apfmon messages muted
[2025-11-23 02:29:30] 2025-11-23 01:29:27,601 [wrapper] ==== wrapper stdout END ====
[2025-11-23 02:29:30] 2025-11-23 01:29:27,724 [wrapper] ==== wrapper stderr END ====
[2025-11-23 02:29:30]  *** Error codes and diagnostics ***
[2025-11-23 02:29:30]     "exeErrorCode": 0,
[2025-11-23 02:29:30]     "exeErrorDiag": "",
[2025-11-23 02:29:30]     "pilotErrorCode": 0,
[2025-11-23 02:29:30]     "pilotErrorDiag": "",
[2025-11-23 02:29:30]  *** Listing of results directory ***
[2025-11-23 02:29:30] total 1319404
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:10 queuedata.json
[2025-11-23 02:29:30] -rwx------. 1 boinc boinc     36292 Nov 18 18:12 runpilot2-wrapper.sh
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc       100 Nov 22 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 02:29:30] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 01:19 run_atlas
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc       105 Nov 22 01:19 job.xml
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc      6392 Nov 22 01:19 init_data.xml
[2025-11-23 02:29:30] -rw-r--r--. 2 boinc boinc 407111862 Nov 22 01:19 EVNT.47493065._000444.pool.root.1
[2025-11-23 02:29:30] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:19 start_atlas.sh
[2025-11-23 02:29:30] drwxrwx--x. 2 boinc boinc        68 Nov 22 01:19 shared
[2025-11-23 02:29:30] -rw-r--r--. 2 boinc boinc    590101 Nov 22 01:19 input.tar.gz
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc         0 Nov 22 01:19 boinc_lockfile
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc      2772 Nov 22 01:19 pandaJob.out
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc    989798 Nov 22 01:23 agis_schedconf.cvmfs.json
[2025-11-23 02:29:30] drwx------. 5 boinc boinc      4096 Nov 22 01:23 pilot3
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc       533 Nov 23 02:11 boinc_task_state.xml
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc 910980818 Nov 23 02:25 HITS.47493068._004437.pool.root.1
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc      1031 Nov 23 02:26 memory_monitor_summary.json
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc   1526164 Nov 23 02:27 agis_ddmendpoints.agis.ALL.json
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc   2535058 Nov 23 02:27 log.47493068._004437.job.log.tgz.1
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc      8630 Nov 23 02:28 heartbeat.json
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc        29 Nov 23 02:29 wrapper_checkpoint.txt
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc      8192 Nov 23 02:29 boinc_mmap_file
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc        95 Nov 23 02:29 pilot_heartbeat.json
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc      4884 Nov 23 02:29 pilotlog.txt
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc  12001165 Nov 23 02:29 log.47493068._004437.job.log.1
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc       353 Nov 23 02:29 output.list
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc       620 Nov 23 02:29 runtime_log
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc  14551040 Nov 23 02:29 result.tar.gz
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc      8703 Nov 23 02:29 runtime_log.err
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc       662 Nov 23 02:29 oGPODmTQef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlXFKDmShN82m.diag
[2025-11-23 02:29:30] -rw-r--r--. 1 boinc boinc     21216 Nov 23 02:29 stderr.txt
[2025-11-23 02:29:30] HITS file was successfully produced:
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc 910980818 Nov 23 02:25 shared/HITS.pool.root.1
[2025-11-23 02:29:30]  *** Contents of shared directory: ***
[2025-11-23 02:29:30] total 1302012
[2025-11-23 02:29:30] -rw-r--r--. 2 boinc boinc 407111862 Nov 22 01:19 ATLAS.root_0
[2025-11-23 02:29:30] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:19 start_atlas.sh
[2025-11-23 02:29:30] -rw-r--r--. 2 boinc boinc    590101 Nov 22 01:19 input.tar.gz
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc 910980818 Nov 23 02:25 HITS.pool.root.1
[2025-11-23 02:29:30] -rw-------. 1 boinc boinc  14551040 Nov 23 02:29 result.tar.gz
02:29:31 (28681): run_atlas exited; CPU time 333328.968422
02:29:31 (28681): called boinc_finish(0)

</stderr_txt>
]]>

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