Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:18:21 (7547): wrapper (7.7.26015): starting
01:18:21 (7547): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 01:18:21] Arguments: --nthreads 8
[2025-11-22 01:18:21] Threads: 8
[2025-11-22 01:18:21] Checking for CVMFS
[2025-11-22 01:18:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 01:18:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 01:18:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 01:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 01:18:23] 2.11.2.0 25230 278727 143276 153153 2 15 23022179 25165825 4296 130560 3 121405334 99.849 85027141 3160 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 01:18:23] CVMFS is ok
[2025-11-22 01:18:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:18:24] Checking for apptainer binary...
[2025-11-22 01:18:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 01:18:24] Running /usr/bin/apptainer --version
[2025-11-22 01:18:24] apptainer version 1.3.2-1.el7
[2025-11-22 01:18:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:18:27] cg-vwn359.simple-grid.lan
[2025-11-22 01:18:27] apptainer works
[2025-11-22 01:18:27] Set ATHENA_PROC_NUMBER=8
[2025-11-22 01:18:27] Set ATHENA_CORE_NUMBER=8
[2025-11-22 01:18:28] Starting ATLAS job with PandaID=6891582725
[2025-11-22 01:18:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:17:17]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:17:17] 2025-11-23 02:16:21,151 | INFO     | sum of deviations: 3764163890505.338
[2025-11-23 03:17:17] 2025-11-23 02:16:21,152 | INFO     | mean x: 1763817752.3541803
[2025-11-23 03:17:17] 2025-11-23 02:16:21,152 | INFO     | mean y: 2868269.4417379857
[2025-11-23 03:17:17] 2025-11-23 02:16:21,152 | INFO     | intersect: -6106138650.3941345
[2025-11-23 03:17:17] 2025-11-23 02:16:21,154 | INFO     | chi2: 10.547762344805331
[2025-11-23 03:17:17] 2025-11-23 02:16:21,156 | INFO     | sum of square deviations: 1076108775293.751
[2025-11-23 03:17:17] 2025-11-23 02:16:21,166 | INFO     | time since job start (93236s) is within the limit (172800.0s)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,226 | INFO     | sum of deviations: 4274629240201.633
[2025-11-23 03:17:17] 2025-11-23 02:16:21,227 | INFO     | mean x: 1763817599.8586526
[2025-11-23 03:17:17] 2025-11-23 02:16:21,227 | INFO     | mean y: 2875546.6571994717
[2025-11-23 03:17:17] 2025-11-23 02:16:21,227 | INFO     | intersect: -7003540960.521564
[2025-11-23 03:17:17] 2025-11-23 02:16:21,229 | INFO     | chi2: 7.384352124204894
[2025-11-23 03:17:17] 2025-11-23 02:16:21,229 | INFO     | current chi2=7.384352124204894 (change=29.991292154571397 %)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,232 | INFO     | sum of square deviations: 1065482998776.9913
[2025-11-23 03:17:17] 2025-11-23 02:16:21,300 | INFO     | sum of deviations: 4651968471708.529
[2025-11-23 03:17:17] 2025-11-23 02:16:21,300 | INFO     | mean x: 1763817447.3631544
[2025-11-23 03:17:17] 2025-11-23 02:16:21,300 | INFO     | mean y: 2880958.973492379
[2025-11-23 03:17:17] 2025-11-23 02:16:21,300 | INFO     | intersect: -7698061397.12335
[2025-11-23 03:17:17] 2025-11-23 02:16:21,302 | INFO     | chi2: 5.368627836235622
[2025-11-23 03:17:17] 2025-11-23 02:16:21,303 | INFO     | current chi2=5.368627836235622 (change=27.29723954200402 %)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,305 | INFO     | sum of square deviations: 1054927409622.6687
[2025-11-23 03:17:17] 2025-11-23 02:16:21,379 | INFO     | sum of deviations: 4886499958056.415
[2025-11-23 03:17:17] 2025-11-23 02:16:21,380 | INFO     | mean x: 1763817294.8676863
[2025-11-23 03:17:17] 2025-11-23 02:16:21,380 | INFO     | mean y: 2884346.424202128
[2025-11-23 03:17:17] 2025-11-23 02:16:21,380 | INFO     | intersect: -8167244762.717984
[2025-11-23 03:17:17] 2025-11-23 02:16:21,382 | INFO     | chi2: 4.573514880443337
[2025-11-23 03:17:17] 2025-11-23 02:16:21,382 | INFO     | current chi2=4.573514880443337 (change=14.810357134939768 %)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,382 | INFO     | right removable region: 1503
[2025-11-23 03:17:17] 2025-11-23 02:16:21,384 | INFO     | sum of square deviations: 1076107520523.7505
[2025-11-23 03:17:17] 2025-11-23 02:16:21,452 | INFO     | sum of deviations: 3208325418029.7275
[2025-11-23 03:17:17] 2025-11-23 02:16:21,453 | INFO     | mean x: 1763817904.8586526
[2025-11-23 03:17:17] 2025-11-23 02:16:21,453 | INFO     | mean y: 2876192.180977543
[2025-11-23 03:17:17] 2025-11-23 02:16:21,453 | INFO     | intersect: -5255800760.638495
[2025-11-23 03:17:17] 2025-11-23 02:16:21,455 | INFO     | chi2: 7.084073470730723
[2025-11-23 03:17:17] 2025-11-23 02:16:21,456 | INFO     | current chi2=7.084073470730723 (change=32.83813913176041 %)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,458 | INFO     | sum of square deviations: 1065480858169.8873
[2025-11-23 03:17:17] 2025-11-23 02:16:21,525 | INFO     | monitor loop #6277: job 0:6891582725 is in state 'finished'
[2025-11-23 03:17:17] 2025-11-23 02:16:21,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,528 | INFO     | sum of deviations: 2996638134880.8247
[2025-11-23 03:17:17] 2025-11-23 02:16:21,530 | INFO     | mean x: 1763818057.3605037
[2025-11-23 03:17:17] 2025-11-23 02:16:21,530 | INFO     | mean y: 2879227.288933068
[2025-11-23 03:17:17] 2025-11-23 02:16:21,531 | INFO     | intersect: -4957814729.012195
[2025-11-23 03:17:17] 2025-11-23 02:16:21,532 | INFO     | chi2: 6.531544583369432
[2025-11-23 03:17:17] 2025-11-23 02:16:21,533 | INFO     | current chi2=6.531544583369432 (change=7.7995928422280665 %)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,533 | INFO     | left removable region: 20
[2025-11-23 03:17:17] 2025-11-23 02:16:21,535 | INFO     | sum of square deviations: 1011352030016.7908
[2025-11-23 03:17:17] 2025-11-23 02:16:21,593 | INFO     | sum of deviations: 3975407488231.865
[2025-11-23 03:17:17] 2025-11-23 02:16:21,593 | INFO     | mean x: 1763817874.3728929
[2025-11-23 03:17:17] 2025-11-23 02:16:21,593 | INFO     | mean y: 2898692.0761968982
[2025-11-23 03:17:17] 2025-11-23 02:16:21,593 | INFO     | intersect: -6930290323.763122
[2025-11-23 03:17:17] 2025-11-23 02:16:21,595 | INFO     | chi2: 0.3547418762165547
[2025-11-23 03:17:17] 2025-11-23 02:16:21,596 | INFO     | current memory leak: 3.93 B/s (using 1483 data points, chi2=0.35)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,598 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | ..............................
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . Timing measurements:
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . get job = 0 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . initial setup = 6 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . payload setup = 154 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . stage-in = 0 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . payload execution = 92785 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . stage-out = 4 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | . log creation = 2 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,599 | INFO     | ..............................
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | 
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | job summary report
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | --------------------------------------------------
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | PanDA job id: 6891582725
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | task id: 47493068
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | errors: (none)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:17:17] 2025-11-23 02:16:21,767 | INFO     | pilot state: finished 
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | transexitcode: 0
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | exeerrorcode: 0
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | exeerrordiag: 
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | exitcode: 0
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | exitmsg: OK
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | cpuconsumptiontime: 342003 s
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | nevents: 1000
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | neventsw: 0
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | pid: 17964
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | pgrp: 17964
[2025-11-23 03:17:17] 2025-11-23 02:16:21,768 | INFO     | corecount: 8
[2025-11-23 03:17:17] 2025-11-23 02:16:21,769 | INFO     | event service: False
[2025-11-23 03:17:17] 2025-11-23 02:16:21,769 | INFO     | sizes: {0: 2298570, 1: 2298825, 12: 2298825, 23: 2298853, 34: 2298881, 44: 2298909, 55: 2299065, 66: 2299093, 77: 2299121, 87: 2299177, 98: 2299205, 105: 2299775, 
[2025-11-23 03:17:17] 2025-11-23 02:16:21,769 | INFO     | --------------------------------------------------
[2025-11-23 03:17:17] 2025-11-23 02:16:21,769 | INFO     | 
[2025-11-23 03:17:17] 2025-11-23 02:16:21,769 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-11-23 03:17:17] 2025-11-23 02:16:21,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:17:17] 2025-11-23 02:16:21,905 | INFO     | job 6891582725 has completed (purged errors)
[2025-11-23 03:17:17] 2025-11-23 02:16:21,905 | INFO     | overall cleanup function is called
[2025-11-23 03:17:17] 2025-11-23 02:16:22,927 | INFO     | --- collectZombieJob: --- 10, [17964]
[2025-11-23 03:17:17] 2025-11-23 02:16:22,927 | INFO     | zombie collector waiting for pid 17964
[2025-11-23 03:17:17] 2025-11-23 02:16:22,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:17:17] 2025-11-23 02:16:22,928 | INFO     | collected zombie processes
[2025-11-23 03:17:17] 2025-11-23 02:16:22,928 | INFO     | will attempt to kill all subprocesses of pid=17964
[2025-11-23 03:17:17] 2025-11-23 02:16:23,041 | INFO     | process IDs to be killed: [17964] (in reverse order)
[2025-11-23 03:17:17] 2025-11-23 02:16:23,589 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:17:17] 2025-11-23 02:16:23,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:17:17] 2025-11-23 02:16:23,597 | INFO     | did not find any defunct processes belonging to 17964
[2025-11-23 03:17:17] 2025-11-23 02:16:23,601 | INFO     | did not find any defunct processes belonging to 17964
[2025-11-23 03:17:17] 2025-11-23 02:16:23,616 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:17:17] 2025-11-23 02:16:23,616 | INFO     | ready for new job
[2025-11-23 03:17:17] 2025-11-23 02:16:23,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:17:17] 2025-11-23 02:16:23,623 | INFO     | ***************************************
[2025-11-23 03:17:17] 2025-11-23 02:16:23,624 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:17:17] 2025-11-23 02:16:23,624 | INFO     | ***************************************
[2025-11-23 03:17:17] 2025-11-23 02:16:23,624 | INFO     | 
[2025-11-23 03:17:17] 2025-11-23 02:16:23,624 | INFO     | pilot is running in a VM
[2025-11-23 03:17:17] 2025-11-23 02:16:23,625 | INFO     | architecture information:
[2025-11-23 03:17:17] 2025-11-23 02:16:23,629 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:17:17] 2025-11-23 02:16:23,742 | INFO     | cat /etc/os-release:
[2025-11-23 03:17:17] NAME="CentOS Linux"
[2025-11-23 03:17:17] VERSION="7 (Core)"
[2025-11-23 03:17:17] ID="centos"
[2025-11-23 03:17:17] ID_LIKE="rhel fedora"
[2025-11-23 03:17:17] VERSION_ID="7"
[2025-11-23 03:17:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:17:17] ANSI_COLOR="0;31"
[2025-11-23 03:17:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:17:17] HOME_URL="https://www.centos.org/"
[2025-11-23 03:17:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:17:17] 
[2025-11-23 03:17:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:17:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:17:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:17:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:17:17] 
[2025-11-23 03:17:17] 2025-11-23 02:16:23,742 | INFO     | ***************************************
[2025-11-23 03:17:17] 2025-11-23 02:16:24,246 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-11-23 03:17:17] 2025-11-23 02:16:24,511 | INFO     | sufficient remaining disk space (492637782016 B)
[2025-11-23 03:17:17] 2025-11-23 02:16:24,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:17:17] 2025-11-23 02:16:24,512 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:17:17] 2025-11-23 02:16:24,512 | INFO     | update_server=False
[2025-11-23 03:17:17] 2025-11-23 02:16:24,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:17:17] 2025-11-23 02:16:24,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:17:17] 2025-11-23 02:16:25,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:17:17] 2025-11-23 02:16:25,041 | INFO     | aborting loop
[2025-11-23 03:17:17] 2025-11-23 02:16:25,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:17:17] 2025-11-23 02:16:25,505 | INFO     | all data control threads have been joined
[2025-11-23 03:17:17] 2025-11-23 02:16:25,519 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:25,873 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:25,896 | INFO     | all job control threads have been joined
[2025-11-23 03:17:17] 2025-11-23 02:16:25,972 | INFO     | all payload control threads have been joined
[2025-11-23 03:17:17] 2025-11-23 02:16:26,046 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,088 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,103 | INFO     | [job] validate thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,331 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,428 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,511 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,512 | INFO     | [data] control thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,521 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,725 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:17:17] 2025-11-23 02:16:26,902 | INFO     | [job] control thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:26,977 | INFO     | [payload] control thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:27,039 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:27,786 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:29,252 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:17:17] 2025-11-23 02:16:54,390 | INFO     | PID=11345 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 03:17:17] 2025-11-23 02:16:54,390 | INFO     | .. there are 9 such processes running
[2025-11-23 03:17:17] 2025-11-23 02:16:54,390 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:17:17] 2025-11-23 02:16:54,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:17:17] 2025-11-23 02:16:54,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:17:17] 2025-11-23 02:17:07,425 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:17:17] 2025-11-23 02:17:07,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023319586624)>', '<ExcThread(monitor, started 140022871205632)>']
[2025-11-23 03:17:17] 2025-11-23 02:17:08,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:17:17] 2025-11-23 02:17:08,474 | INFO     | [monitor] control thread has ended
[2025-11-23 03:17:17] 2025-11-23 02:17:12,629 | INFO     | all workflow threads have been joined
[2025-11-23 03:17:17] 2025-11-23 02:17:12,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:17:17] 2025-11-23 02:17:12,630 | INFO     | traces error code: 0
[2025-11-23 03:17:17] 2025-11-23 02:17:12,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:17:17] 2025-11-23 02:17:13,140 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:17:17] 2025-11-23 02:17:13,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:17:17] 2025-11-23 02:17:13,343 [wrapper] pilotpid: 11345
[2025-11-23 03:17:17] 2025-11-23 02:17:13,388 [wrapper] Pilot exit status: 0
[2025-11-23 03:17:17] 2025-11-23 02:17:13,648 [wrapper] pandaids: 6891582725
[2025-11-23 03:17:17] 2025-11-23 02:17:14,458 [wrapper] cleanup supervisor_pilot  3782 11346
[2025-11-23 03:17:17] 2025-11-23 02:17:14,568 [wrapper] Test setup, not cleaning
[2025-11-23 03:17:17] 2025-11-23 02:17:14,679 [wrapper] apfmon messages muted
[2025-11-23 03:17:17] 2025-11-23 02:17:14,812 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:17:17] 2025-11-23 02:17:14,871 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:17:17]  *** Error codes and diagnostics ***
[2025-11-23 03:17:17]     "exeErrorCode": 0,
[2025-11-23 03:17:17]     "exeErrorDiag": "",
[2025-11-23 03:17:17]     "pilotErrorCode": 0,
[2025-11-23 03:17:17]     "pilotErrorDiag": "",
[2025-11-23 03:17:17]  *** Listing of results directory ***
[2025-11-23 03:17:17] total 1328588
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:05 queuedata.json
[2025-11-23 03:17:17] -rwx------. 1 boinc boinc     36292 Nov 18 18:07 runpilot2-wrapper.sh
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc       100 Nov 22 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:17:17] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 01:18 run_atlas
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc       105 Nov 22 01:18 job.xml
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc      6394 Nov 22 01:18 init_data.xml
[2025-11-23 03:17:17] -rw-r--r--. 2 boinc boinc 411140458 Nov 22 01:18 EVNT.47493065._000431.pool.root.1
[2025-11-23 03:17:17] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:18 start_atlas.sh
[2025-11-23 03:17:17] drwxrwx--x. 2 boinc boinc        68 Nov 22 01:18 shared
[2025-11-23 03:17:17] -rw-r--r--. 2 boinc boinc    590100 Nov 22 01:18 input.tar.gz
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc         0 Nov 22 01:18 boinc_lockfile
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc      2773 Nov 22 01:18 pandaJob.out
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc    989798 Nov 22 01:22 agis_schedconf.cvmfs.json
[2025-11-23 03:17:17] drwx------. 5 boinc boinc      4096 Nov 22 01:22 pilot3
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc       533 Nov 23 02:52 boinc_task_state.xml
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc 915448528 Nov 23 03:14 HITS.47493068._004302.pool.root.1
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc      1031 Nov 23 03:14 memory_monitor_summary.json
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc   1526164 Nov 23 03:14 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc   2576546 Nov 23 03:14 log.47493068._004302.job.log.tgz.1
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc        95 Nov 23 03:16 pilot_heartbeat.json
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc      8629 Nov 23 03:16 heartbeat.json
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc      4885 Nov 23 03:17 pilotlog.txt
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc  12408433 Nov 23 03:17 log.47493068._004302.job.log.1
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc      8192 Nov 23 03:17 boinc_mmap_file
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc       353 Nov 23 03:17 output.list
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc       620 Nov 23 03:17 runtime_log
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc  15001600 Nov 23 03:17 result.tar.gz
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc       662 Nov 23 03:17 SGaMDm9Lef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpxFKDmvJ6onm.diag
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc      8717 Nov 23 03:17 runtime_log.err
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc        29 Nov 23 03:17 wrapper_checkpoint.txt
[2025-11-23 03:17:17] -rw-r--r--. 1 boinc boinc     20920 Nov 23 03:17 stderr.txt
[2025-11-23 03:17:17] HITS file was successfully produced:
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc 915448528 Nov 23 03:14 shared/HITS.pool.root.1
[2025-11-23 03:17:17]  *** Contents of shared directory: ***
[2025-11-23 03:17:17] total 1310752
[2025-11-23 03:17:17] -rw-r--r--. 2 boinc boinc 411140458 Nov 22 01:18 ATLAS.root_0
[2025-11-23 03:17:17] -rw-r--r--. 2 boinc boinc     15120 Nov 22 01:18 start_atlas.sh
[2025-11-23 03:17:17] -rw-r--r--. 2 boinc boinc    590100 Nov 22 01:18 input.tar.gz
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc 915448528 Nov 23 03:14 HITS.pool.root.1
[2025-11-23 03:17:17] -rw-------. 1 boinc boinc  15001600 Nov 23 03:17 result.tar.gz
03:17:18 (7547): run_atlas exited; CPU time 342538.772116
03:17:18 (7547): called boinc_finish(0)

</stderr_txt>
]]>

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