Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:13:18 (15110): wrapper (7.7.26015): starting
23:13:18 (15110): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:13:18] Arguments: --nthreads 8
[2025-11-21 23:13:18] Threads: 8
[2025-11-21 23:13:18] Checking for CVMFS
[2025-11-21 23:13:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:13:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:13:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:13:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:13:20] 2.11.2.0 2066 82048 98076 153145 3 239 24584754 25165825 4249 130560 2 21703543 99.894 12210590 2115 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 23:13:20] CVMFS is ok
[2025-11-21 23:13:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:13:20] Checking for apptainer binary...
[2025-11-21 23:13:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:13:20] Running /usr/bin/apptainer --version
[2025-11-21 23:13:21] apptainer version 1.3.2-1.el7
[2025-11-21 23:13:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:13:29] cg-vwn446.simple-grid.lan
[2025-11-21 23:13:29] apptainer works
[2025-11-21 23:13:29] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:13:29] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:13:29] Starting ATLAS job with PandaID=6891579602
[2025-11-21 23:13:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:59:44]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:59:44] 2025-11-22 23:58:38,393 | INFO     | time since job start (92505s) is within the limit (172800.0s)
[2025-11-23 00:59:44] 2025-11-22 23:58:38,614 | INFO     | monitor loop #6227: job 0:6891579602 is in state 'finished'
[2025-11-23 00:59:44] 2025-11-22 23:58:38,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:59:44] 2025-11-22 23:58:40,399 | INFO     | time since job start (92507s) is within the limit (172800.0s)
[2025-11-23 00:59:44] 2025-11-22 23:58:41,121 | INFO     | monitor loop #6228: job 0:6891579602 is in state 'finished'
[2025-11-23 00:59:44] 2025-11-22 23:58:41,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:59:44] 2025-11-22 23:58:41,655 | INFO     | PID=18946 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 00:59:44] 2025-11-22 23:58:41,655 | INFO     | .. there are 9 such processes running
[2025-11-23 00:59:44] 2025-11-22 23:58:42,658 | INFO     | time since job start (92509s) is within the limit (172800.0s)
[2025-11-23 00:59:44] 2025-11-22 23:58:43,626 | INFO     | monitor loop #6229: job 0:6891579602 is in state 'finished'
[2025-11-23 00:59:44] 2025-11-22 23:58:43,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:59:44] 2025-11-22 23:58:44,672 | INFO     | time since job start (92511s) is within the limit (172800.0s)
[2025-11-23 00:59:44] 2025-11-22 23:58:46,136 | INFO     | monitor loop #6230: job 0:6891579602 is in state 'finished'
[2025-11-23 00:59:44] 2025-11-22 23:58:46,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:59:44] 2025-11-22 23:58:46,678 | INFO     | time since job start (92513s) is within the limit (172800.0s)
[2025-11-23 00:59:44] 2025-11-22 23:58:47,863 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 00:59:44] 2025-11-22 23:58:47,864 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 00:59:44] 2025-11-22 23:58:47,866 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6891579602/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 00:59:44] 2025-11-22 23:58:47,867 | INFO     | extracted standard info from prmon json
[2025-11-23 00:59:44] 2025-11-22 23:58:47,867 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 00:59:44] 2025-11-22 23:58:47,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 00:59:44] 2025-11-22 23:58:47,916 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:59:44] 2025-11-22 23:58:47,918 | INFO     | sum of square deviations: 1061248729343.2671
[2025-11-23 00:59:44] 2025-11-22 23:58:47,991 | INFO     | sum of deviations: 3837841836124.155
[2025-11-23 00:59:44] 2025-11-22 23:58:47,992 | INFO     | mean x: 1763809866.2023888
[2025-11-23 00:59:44] 2025-11-22 23:58:47,992 | INFO     | mean y: 2857002.1798274717
[2025-11-23 00:59:44] 2025-11-22 23:58:47,992 | INFO     | intersect: -6375688487.028038
[2025-11-23 00:59:44] 2025-11-22 23:58:47,994 | INFO     | chi2: 18.73680237821369
[2025-11-23 00:59:44] 2025-11-22 23:58:47,996 | INFO     | sum of square deviations: 1050721075293.5192
[2025-11-23 00:59:44] 2025-11-22 23:58:48,088 | INFO     | sum of deviations: 4335965109087.7744
[2025-11-23 00:59:44] 2025-11-22 23:58:48,088 | INFO     | mean x: 1763809713.7063916
[2025-11-23 00:59:44] 2025-11-22 23:58:48,088 | INFO     | mean y: 2864216.3055925434
[2025-11-23 00:59:44] 2025-11-22 23:58:48,088 | INFO     | intersect: -7275772862.10705
[2025-11-23 00:59:44] 2025-11-22 23:58:48,090 | INFO     | chi2: 15.580154720207531
[2025-11-23 00:59:44] 2025-11-22 23:58:48,090 | INFO     | current chi2=15.580154720207531 (change=16.84731254718556 %)
[2025-11-23 00:59:44] 2025-11-22 23:58:48,091 | INFO     | right removable region: 1501
[2025-11-23 00:59:44] 2025-11-22 23:58:48,093 | INFO     | sum of square deviations: 1050719969973.518
[2025-11-23 00:59:44] 2025-11-22 23:58:48,174 | INFO     | sum of deviations: 3236672304123.4
[2025-11-23 00:59:44] 2025-11-22 23:58:48,175 | INFO     | mean x: 1763810018.7063916
[2025-11-23 00:59:44] 2025-11-22 23:58:48,175 | INFO     | mean y: 2865708.9374167775
[2025-11-23 00:59:44] 2025-11-22 23:58:48,175 | INFO     | intersect: -5430432601.197717
[2025-11-23 00:59:44] 2025-11-22 23:58:48,177 | INFO     | chi2: 14.578432290721308
[2025-11-23 00:59:44] 2025-11-22 23:58:48,177 | INFO     | current chi2=14.578432290721308 (change=22.19359527604105 %)
[2025-11-23 00:59:44] 2025-11-22 23:58:48,177 | INFO     | left removable region: 10
[2025-11-23 00:59:44] 2025-11-22 23:58:48,183 | INFO     | sum of square deviations: 1027803611743.8916
[2025-11-23 00:59:44] 2025-11-22 23:58:48,255 | INFO     | sum of deviations: 3329559147756.607
[2025-11-23 00:59:44] 2025-11-22 23:58:48,256 | INFO     | mean x: 1763809988.2152917
[2025-11-23 00:59:44] 2025-11-22 23:58:48,256 | INFO     | mean y: 2882070.789403085
[2025-11-23 00:59:44] 2025-11-22 23:58:48,256 | INFO     | intersect: -5710962105.339122
[2025-11-23 00:59:44] 2025-11-22 23:58:48,258 | INFO     | chi2: 7.724367706440321
[2025-11-23 00:59:44] 2025-11-22 23:58:48,258 | INFO     | current memory leak: 3.24 B/s (using 1491 data points, chi2=7.72)
[2025-11-23 00:59:44] 2025-11-22 23:58:48,261 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 00:59:44] 2025-11-22 23:58:48,262 | INFO     | ..............................
[2025-11-23 00:59:44] 2025-11-22 23:58:48,262 | INFO     | . Timing measurements:
[2025-11-23 00:59:44] 2025-11-22 23:58:48,262 | INFO     | . get job = 0 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,262 | INFO     | . initial setup = 8 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,262 | INFO     | . payload setup = 162 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,262 | INFO     | . stage-in = 0 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,262 | INFO     | . payload execution = 92048 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,263 | INFO     | . stage-out = 9 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,263 | INFO     | . log creation = 2 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,263 | INFO     | ..............................
[2025-11-23 00:59:44] 2025-11-22 23:58:48,414 | INFO     | 
[2025-11-23 00:59:44] 2025-11-22 23:58:48,414 | INFO     | job summary report
[2025-11-23 00:59:44] 2025-11-22 23:58:48,414 | INFO     | --------------------------------------------------
[2025-11-23 00:59:44] 2025-11-22 23:58:48,414 | INFO     | PanDA job id: 6891579602
[2025-11-23 00:59:44] 2025-11-22 23:58:48,414 | INFO     | task id: 47493068
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | errors: (none)
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | pilot state: finished 
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | transexitcode: 0
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | exeerrorcode: 0
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | exeerrordiag: 
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | exitcode: 0
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | exitmsg: OK
[2025-11-23 00:59:44] 2025-11-22 23:58:48,415 | INFO     | cpuconsumptiontime: 339997 s
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | nevents: 1000
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | neventsw: 0
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | pid: 25599
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | pgrp: 25599
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | corecount: 8
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | event service: False
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | sizes: {0: 2298562, 1: 2298817, 2: 2298817, 12: 2298845, 23: 2298873, 34: 2298901, 45: 2299057, 55: 2299085, 66: 2299113, 77: 2299141, 88: 2299197, 95: 2299767, 98
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | --------------------------------------------------
[2025-11-23 00:59:44] 2025-11-22 23:58:48,416 | INFO     | 
[2025-11-23 00:59:44] 2025-11-22 23:58:48,417 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-23 00:59:44] 2025-11-22 23:58:48,685 | INFO     | time since job start (92515s) is within the limit (172800.0s)
[2025-11-23 00:59:44] 2025-11-22 23:58:49,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,053 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,053 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,055 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:59:44] 2025-11-22 23:58:49,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,055 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:59:44] 2025-11-22 23:58:49,055 | INFO     | job 6891579602 has completed (purged errors)
[2025-11-23 00:59:44] 2025-11-22 23:58:49,056 | INFO     | overall cleanup function is called
[2025-11-23 00:59:44] 2025-11-22 23:58:50,080 | INFO     | --- collectZombieJob: --- 10, [25599]
[2025-11-23 00:59:44] 2025-11-22 23:58:50,081 | INFO     | zombie collector waiting for pid 25599
[2025-11-23 00:59:44] 2025-11-22 23:58:50,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:59:44] 2025-11-22 23:58:50,081 | INFO     | collected zombie processes
[2025-11-23 00:59:44] 2025-11-22 23:58:50,081 | INFO     | will attempt to kill all subprocesses of pid=25599
[2025-11-23 00:59:44] 2025-11-22 23:58:50,211 | INFO     | process IDs to be killed: [25599] (in reverse order)
[2025-11-23 00:59:44] 2025-11-22 23:58:51,226 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:59:44] 2025-11-22 23:58:51,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:59:44] 2025-11-22 23:58:51,230 | INFO     | did not find any defunct processes belonging to 25599
[2025-11-23 00:59:44] 2025-11-22 23:58:51,233 | INFO     | did not find any defunct processes belonging to 25599
[2025-11-23 00:59:44] 2025-11-22 23:58:51,297 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:59:44] 2025-11-22 23:58:51,297 | INFO     | ready for new job
[2025-11-23 00:59:44] 2025-11-22 23:58:51,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:59:44] 2025-11-22 23:58:51,304 | INFO     | ***************************************
[2025-11-23 00:59:44] 2025-11-22 23:58:51,305 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:59:44] 2025-11-22 23:58:51,305 | INFO     | ***************************************
[2025-11-23 00:59:44] 2025-11-22 23:58:51,305 | INFO     | 
[2025-11-23 00:59:44] 2025-11-22 23:58:51,305 | INFO     | pilot is running in a VM
[2025-11-23 00:59:44] 2025-11-22 23:58:51,306 | INFO     | architecture information:
[2025-11-23 00:59:44] 2025-11-22 23:58:51,313 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:59:44] 2025-11-22 23:58:51,554 | INFO     | cat /etc/os-release:
[2025-11-23 00:59:44] NAME="CentOS Linux"
[2025-11-23 00:59:44] VERSION="7 (Core)"
[2025-11-23 00:59:44] ID="centos"
[2025-11-23 00:59:44] ID_LIKE="rhel fedora"
[2025-11-23 00:59:44] VERSION_ID="7"
[2025-11-23 00:59:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:59:44] ANSI_COLOR="0;31"
[2025-11-23 00:59:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:59:44] HOME_URL="https://www.centos.org/"
[2025-11-23 00:59:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:59:44] 
[2025-11-23 00:59:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:59:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:59:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:59:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:59:44] 
[2025-11-23 00:59:44] 2025-11-22 23:58:51,555 | INFO     | ***************************************
[2025-11-23 00:59:44] 2025-11-22 23:58:52,059 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-23 00:59:44] 2025-11-22 23:58:52,314 | INFO     | sufficient remaining disk space (492908314624 B)
[2025-11-23 00:59:44] 2025-11-22 23:58:52,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:59:44] 2025-11-22 23:58:52,315 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:59:44] 2025-11-22 23:58:52,315 | INFO     | update_server=False
[2025-11-23 00:59:44] 2025-11-22 23:58:52,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:59:44] 2025-11-22 23:58:52,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:59:44] 2025-11-22 23:58:52,316 | INFO     | aborting loop
[2025-11-23 00:59:44] 2025-11-22 23:58:52,760 | INFO     | all payload control threads have been joined
[2025-11-23 00:59:44] 2025-11-22 23:58:53,104 | INFO     | all data control threads have been joined
[2025-11-23 00:59:44] 2025-11-22 23:58:53,321 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:53,322 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:53,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:59:44] 2025-11-22 23:58:53,728 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:53,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:59:44] 2025-11-22 23:58:53,766 | INFO     | [payload] control thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:53,781 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:53,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:53,818 | INFO     | all job control threads have been joined
[2025-11-23 00:59:44] 2025-11-22 23:58:53,822 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:53,873 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:54,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:59:44] 2025-11-22 23:58:54,102 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:54,110 | INFO     | [data] control thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:54,436 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:54,457 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:54,526 | INFO     | [job] validate thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:54,823 | INFO     | [job] control thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:55,756 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:58:58,089 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:59:44] 2025-11-22 23:59:21,889 | INFO     | PID=18946 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 00:59:44] 2025-11-22 23:59:21,890 | INFO     | .. there are 9 such processes running
[2025-11-23 00:59:44] 2025-11-22 23:59:21,891 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:59:44] 2025-11-22 23:59:21,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:59:44] 2025-11-22 23:59:21,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:59:44] 2025-11-22 23:59:34,173 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:59:44] 2025-11-22 23:59:34,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724064425792)>', '<ExcThread(monitor, started 139723758606080)>']
[2025-11-23 00:59:44] 2025-11-22 23:59:34,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:59:44] 2025-11-22 23:59:34,969 | INFO     | [monitor] control thread has ended
[2025-11-23 00:59:44] 2025-11-22 23:59:39,758 | INFO     | all workflow threads have been joined
[2025-11-23 00:59:44] 2025-11-22 23:59:39,758 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:59:44] 2025-11-22 23:59:39,758 | INFO     | traces error code: 0
[2025-11-23 00:59:44] 2025-11-22 23:59:39,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:59:44] 2025-11-22 23:59:40,145 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:59:44] 2025-11-22 23:59:40,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:59:44] 2025-11-22 23:59:40,236 [wrapper] pilotpid: 18946
[2025-11-23 00:59:44] 2025-11-22 23:59:40,275 [wrapper] Pilot exit status: 0
[2025-11-23 00:59:44] 2025-11-22 23:59:40,602 [wrapper] pandaids: 6891579602
[2025-11-23 00:59:44] 2025-11-22 23:59:41,461 [wrapper] cleanup supervisor_pilot 14851 18947
[2025-11-23 00:59:44] 2025-11-22 23:59:41,546 [wrapper] Test setup, not cleaning
[2025-11-23 00:59:44] 2025-11-22 23:59:41,665 [wrapper] apfmon messages muted
[2025-11-23 00:59:44] 2025-11-22 23:59:41,774 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:59:44] 2025-11-22 23:59:41,876 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:59:44]  *** Error codes and diagnostics ***
[2025-11-23 00:59:44]     "exeErrorCode": 0,
[2025-11-23 00:59:44]     "exeErrorDiag": "",
[2025-11-23 00:59:44]     "pilotErrorCode": 0,
[2025-11-23 00:59:44]     "pilotErrorDiag": "",
[2025-11-23 00:59:44]  *** Listing of results directory ***
[2025-11-23 00:59:44] total 1338120
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-23 00:59:44] -rwx------. 1 boinc boinc     36292 Nov 18 17:52 runpilot2-wrapper.sh
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:52 queuedata.json
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc       100 Nov 21 23:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:59:44] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 23:13 run_atlas
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc       105 Nov 21 23:13 job.xml
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc      6393 Nov 21 23:13 init_data.xml
[2025-11-23 00:59:44] -rw-r--r--. 2 boinc boinc 410263902 Nov 21 23:13 EVNT.47493065._000406.pool.root.1
[2025-11-23 00:59:44] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:13 start_atlas.sh
[2025-11-23 00:59:44] drwxrwx--x. 2 boinc boinc        68 Nov 21 23:13 shared
[2025-11-23 00:59:44] -rw-r--r--. 2 boinc boinc    590096 Nov 21 23:13 input.tar.gz
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc         0 Nov 21 23:13 boinc_lockfile
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc      2769 Nov 21 23:13 pandaJob.out
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc    989798 Nov 21 23:16 agis_schedconf.cvmfs.json
[2025-11-23 00:59:44] drwx------. 5 boinc boinc      4096 Nov 21 23:16 pilot3
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc       533 Nov 23 00:36 boinc_task_state.xml
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc 926234289 Nov 23 00:55 HITS.47493068._004051.pool.root.1
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc      1031 Nov 23 00:56 memory_monitor_summary.json
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc   1526164 Nov 23 00:57 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc   2579218 Nov 23 00:57 log.47493068._004051.job.log.tgz.1
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc      8625 Nov 23 00:58 heartbeat.json
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc        29 Nov 23 00:59 wrapper_checkpoint.txt
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc      8192 Nov 23 00:59 boinc_mmap_file
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc        95 Nov 23 00:59 pilot_heartbeat.json
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc      4884 Nov 23 00:59 pilotlog.txt
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc  12335032 Nov 23 00:59 log.47493068._004051.job.log.1
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc       353 Nov 23 00:59 output.list
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc       620 Nov 23 00:59 runtime_log
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc  14929920 Nov 23 00:59 result.tar.gz
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc      8703 Nov 23 00:59 runtime_log.err
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc       662 Nov 23 00:59 ohXMDma7df8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRUFKDmTGhlam.diag
[2025-11-23 00:59:44] -rw-r--r--. 1 boinc boinc     21499 Nov 23 00:59 stderr.txt
[2025-11-23 00:59:44] HITS file was successfully produced:
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc 926234289 Nov 23 00:55 shared/HITS.pool.root.1
[2025-11-23 00:59:44]  *** Contents of shared directory: ***
[2025-11-23 00:59:44] total 1320356
[2025-11-23 00:59:44] -rw-r--r--. 2 boinc boinc 410263902 Nov 21 23:13 ATLAS.root_0
[2025-11-23 00:59:44] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:13 start_atlas.sh
[2025-11-23 00:59:44] -rw-r--r--. 2 boinc boinc    590096 Nov 21 23:13 input.tar.gz
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc 926234289 Nov 23 00:55 HITS.pool.root.1
[2025-11-23 00:59:44] -rw-------. 1 boinc boinc  14929920 Nov 23 00:59 result.tar.gz
00:59:46 (15110): run_atlas exited; CPU time 340629.027925
00:59:46 (15110): called boinc_finish(0)

</stderr_txt>
]]>

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