Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:20 (3153460): wrapper (7.7.26015): starting
12:04:20 (3153460): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 12:04:20] Arguments: --nthreads 8
[2025-11-18 12:04:20] Threads: 8
[2025-11-18 12:04:20] Checking for CVMFS
[2025-11-18 12:04:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 12:04:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 12:04:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 12:04:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 12:04:21] 2.11.3.0 3806795 17322 243044 153012 0 557 40174848 45568000 10054 130560 0 115717661 99.813 56690077 10142 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-18 12:04:21] CVMFS is ok
[2025-11-18 12:04:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 12:04:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 12:04:21] Further information can be found at the LHC@home message board.
[2025-11-18 12:04:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 12:04:21] Checking for apptainer binary...
[2025-11-18 12:04:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 12:04:21] Running /usr/bin/apptainer --version
[2025-11-18 12:04:21] apptainer version 1.4.1-1.el9
[2025-11-18 12:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 12:04:21] wns0005.triumf.lcg
[2025-11-18 12:04:21] apptainer works
[2025-11-18 12:04:21] Set ATHENA_PROC_NUMBER=8
[2025-11-18 12:04:21] Set ATHENA_CORE_NUMBER=8
[2025-11-18 12:04:21] Starting ATLAS job with PandaID=6891594166
[2025-11-18 12:04:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-18 12:09:49]  *** The last 200 lines of the pilot log: ***
[2025-11-18 12:09:49] 2025-11-18 20:09:08,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:09:49] 2025-11-18 20:09:08,902 | WARNING  | wrong length of table data, x=[1763496329.0, 1763496390.0], y=[1201.0, 435359.0] (must be same and length>=4)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | ..............................
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . Timing measurements:
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . get job = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . initial setup = 3 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . payload setup = 13 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . stage-in = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . payload execution = 103 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . stage-out = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . log creation = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | ..............................
[2025-11-18 12:09:49] 2025-11-18 20:09:08,904 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:09:49] 2025-11-18 20:09:08,904 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891594166/pilotlog.txt
[2025-11-18 12:09:49] 2025-11-18 20:09:08,916 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-18 12:09:49] - Log from pilotlog.txt -
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891594166/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | INFO     | extracted standard info from prmon json
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 12:09:49] 2025-11-18 20:09:08,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 12:09:49] 2025-11-18 20:09:08,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:09:49] 2025-11-18 20:09:08,902 | WARNING  | wrong length of table data, x=[1763496329.0, 1763496390.0], y=[1201.0, 435359.0] (must be same and length>=4)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | ..............................
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . Timing measurements:
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . get job = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . initial setup = 3 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . payload setup = 13 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . stage-in = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . payload execution = 103 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . stage-out = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . log creation = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | ..............................
[2025-11-18 12:09:49] 2025-11-18 20:09:08,904 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:09:49] 2025-11-18 20:09:08,904 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891594166/pilotlog.txt
[2025-11-18 12:09:49] 2025-11-18 20:09:08,916 | WARNING  | 
[2025-11-18 12:09:49] [begin log extracts]
[2025-11-18 12:09:49] - Log from pilotlog.txt -
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891594166/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | INFO     | extracted standard info from prmon json
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 12:09:49] 2025-11-18 20:09:08,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 12:09:49] 2025-11-18 20:09:08,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 12:09:49] 2025-11-18 20:09:08,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:09:49] 2025-11-18 20:09:08,902 | WARNING  | wrong length of table data, x=[1763496329.0, 1763496390.0], y=[1201.0, 435359.0] (must be same and length>=4)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | ..............................
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . Timing measurements:
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . get job = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . initial setup = 3 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . payload setup = 13 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . stage-in = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . payload execution = 103 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . stage-out = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | . log creation = 0 s
[2025-11-18 12:09:49] 2025-11-18 20:09:08,903 | INFO     | ..............................
[2025-11-18 12:09:49] 2025-11-18 20:09:08,904 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:09:49] 2025-11-18 20:09:08,904 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891594166/pilotlog.txt
[2025-11-18 12:09:49] [end log extracts]
[2025-11-18 12:09:49] 2025-11-18 20:09:08,916 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-18 12:09:49] 2025-11-18 20:09:08,917 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-18 12:09:49] 2025-11-18 20:09:09,064 | INFO     | 
[2025-11-18 12:09:49] 2025-11-18 20:09:09,064 | INFO     | job summary report
[2025-11-18 12:09:49] 2025-11-18 20:09:09,064 | INFO     | --------------------------------------------------
[2025-11-18 12:09:49] 2025-11-18 20:09:09,064 | INFO     | PanDA job id: 6891594166
[2025-11-18 12:09:49] 2025-11-18 20:09:09,064 | INFO     | task id: 47493068
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-18 12:06:54,990 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | pilot state: failed 
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | transexitcode: 65
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | exeerrorcode: 65
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | exitcode: 65
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | cpuconsumptiontime: 47 s
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | nevents: 0
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | neventsw: 0
[2025-11-18 12:09:49] 2025-11-18 20:09:09,065 | INFO     | pid: 3175560
[2025-11-18 12:09:49] 2025-11-18 20:09:09,066 | INFO     | pgrp: 3175560
[2025-11-18 12:09:49] 2025-11-18 20:09:09,066 | INFO     | corecount: 8
[2025-11-18 12:09:49] 2025-11-18 20:09:09,066 | INFO     | event service: False
[2025-11-18 12:09:49] 2025-11-18 20:09:09,066 | INFO     | sizes: {0: 2297026, 1: 2297225, 9: 2297487, 11: 2297515, 117: 2322948, 118: 2322924, 119: 2327398, 121: 2327426, 246: 2327592}
[2025-11-18 12:09:49] 2025-11-18 20:09:09,066 | INFO     | --------------------------------------------------
[2025-11-18 12:09:49] 2025-11-18 20:09:09,066 | INFO     | 
[2025-11-18 12:09:49] 2025-11-18 20:09:09,066 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-18 12:09:49] 2025-11-18 20:09:09,070 | INFO     | time since job start (267s) is within the limit (172800.0s)
[2025-11-18 12:09:49] 2025-11-18 20:09:09,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | job 6891594166 has completed (purged errors)
[2025-11-18 12:09:49] 2025-11-18 20:09:09,091 | INFO     | overall cleanup function is called
[2025-11-18 12:09:49] 2025-11-18 20:09:10,106 | INFO     | --- collectZombieJob: --- 10, [3175560]
[2025-11-18 12:09:49] 2025-11-18 20:09:10,106 | INFO     | zombie collector waiting for pid 3175560
[2025-11-18 12:09:49] 2025-11-18 20:09:10,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-18 12:09:49] 2025-11-18 20:09:10,106 | INFO     | collected zombie processes
[2025-11-18 12:09:49] 2025-11-18 20:09:10,106 | INFO     | will attempt to kill all subprocesses of pid=3175560
[2025-11-18 12:09:49] 2025-11-18 20:09:10,295 | INFO     | process IDs to be killed: [3175560] (in reverse order)
[2025-11-18 12:09:49] 2025-11-18 20:09:10,347 | WARNING  | found no corresponding commands to process id(s)
[2025-11-18 12:09:49] 2025-11-18 20:09:10,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-18 12:09:49] 2025-11-18 20:09:10,353 | INFO     | did not find any defunct processes belonging to 3175560
[2025-11-18 12:09:49] 2025-11-18 20:09:10,356 | INFO     | did not find any defunct processes belonging to 3175560
[2025-11-18 12:09:49] 2025-11-18 20:09:10,357 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-18 12:09:49] 2025-11-18 20:09:10,358 | INFO     | ready for new job
[2025-11-18 12:09:49] 2025-11-18 20:09:10,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-18 12:09:49] 2025-11-18 20:09:10,360 | INFO     | ***************************************
[2025-11-18 12:09:49] 2025-11-18 20:09:10,360 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-18 12:09:49] 2025-11-18 20:09:10,360 | INFO     | ***************************************
[2025-11-18 12:09:49] 2025-11-18 20:09:10,360 | INFO     | 
[2025-11-18 12:09:49] 2025-11-18 20:09:10,362 | INFO     | architecture information:
[2025-11-18 12:09:49] 2025-11-18 20:09:10,378 | INFO     | executing command: cat /etc/os-release
[2025-11-18 12:09:49] 2025-11-18 20:09:10,389 | INFO     | cat /etc/os-release:
[2025-11-18 12:09:49] NAME="CentOS Linux"
[2025-11-18 12:09:49] VERSION="7 (Core)"
[2025-11-18 12:09:49] ID="centos"
[2025-11-18 12:09:49] ID_LIKE="rhel fedora"
[2025-11-18 12:09:49] VERSION_ID="7"
[2025-11-18 12:09:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-18 12:09:49] ANSI_COLOR="0;31"
[2025-11-18 12:09:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-18 12:09:49] HOME_URL="https://www.centos.org/"
[2025-11-18 12:09:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-18 12:09:49] 
[2025-11-18 12:09:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-18 12:09:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-18 12:09:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-18 12:09:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-18 12:09:49] 
[2025-11-18 12:09:49] 2025-11-18 20:09:10,389 | INFO     | ***************************************
[2025-11-18 12:09:49] 2025-11-18 20:09:10,891 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-18 12:09:49] 2025-11-18 20:09:10,905 | INFO     | sufficient remaining disk space (1348705714176 B)
[2025-11-18 12:09:49] 2025-11-18 20:09:10,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-18 12:09:49] 2025-11-18 20:09:10,905 | INFO     | current server update state: UPDATING_FINAL
[2025-11-18 12:09:49] 2025-11-18 20:09:10,906 | INFO     | update_server=False
[2025-11-18 12:09:49] 2025-11-18 20:09:10,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-18 12:09:49] 2025-11-18 20:09:10,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-18 12:09:49] 2025-11-18 20:09:10,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-18 12:09:49] 2025-11-18 20:09:10,906 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-18 12:09:49] 2025-11-18 20:09:10,906 | INFO     | found 0 job(s) in 20 queues
[2025-11-18 12:09:49] 2025-11-18 20:09:10,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-18 12:09:49] 2025-11-18 20:09:10,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-18 12:09:49] 2025-11-18 20:09:11,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-18 12:09:49] 2025-11-18 20:09:11,404 | INFO     | aborting loop
[2025-11-18 12:09:49] 2025-11-18 20:09:11,586 | INFO     | all data control threads have been joined
[2025-11-18 12:09:49] 2025-11-18 20:09:11,911 | INFO     | [job] retrieve thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:11,912 | INFO     | [job] queue monitor thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,043 | INFO     | [payload] validate_pre thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,095 | INFO     | [job] create_data_payload thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,104 | INFO     | all job control threads have been joined
[2025-11-18 12:09:49] 2025-11-18 20:09:12,189 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,244 | INFO     | [payload] failed_post thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-18 12:09:49] 2025-11-18 20:09:12,370 | INFO     | all payload control threads have been joined
[2025-11-18 12:09:49] 2025-11-18 20:09:12,410 | INFO     | [job] job monitor thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,497 | INFO     | [data] copytool_in thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,574 | INFO     | [payload] execute_payloads thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,591 | INFO     | [data] control thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:12,911 | INFO     | [data] copytool_out thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:13,110 | INFO     | [job] control thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:13,174 | INFO     | [payload] validate_post thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:13,272 | INFO     | [job] validate thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:13,376 | INFO     | [payload] control thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:16,296 | INFO     | [data] queue_monitor thread has finished
[2025-11-18 12:09:49] 2025-11-18 20:09:42,186 | INFO     | [monitor] cgroup control has ended
[2025-11-18 12:09:49] 2025-11-18 20:09:44,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426942994240)>', '<ExcThread(monitor, started 140426547808000)>']
[2025-11-18 12:09:49] 2025-11-18 20:09:45,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-18 12:09:49] 2025-11-18 20:09:45,143 | INFO     | [monitor] control thread has ended
[2025-11-18 12:09:49] 2025-11-18 20:09:49,228 | INFO     | all workflow threads have been joined
[2025-11-18 12:09:49] 2025-11-18 20:09:49,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-18 12:09:49] 2025-11-18 20:09:49,229 | INFO     | traces error code: 0
[2025-11-18 12:09:49] 2025-11-18 20:09:49,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-18 12:09:49] 2025-11-18 20:09:49,333 [wrapper] ==== pilot stdout END ====
[2025-11-18 12:09:49] 2025-11-18 20:09:49,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-18 12:09:49] 2025-11-18 20:09:49,338 [wrapper] pilotpid: 3159757
[2025-11-18 12:09:49] 2025-11-18 20:09:49,340 [wrapper] Pilot exit status: 0
[2025-11-18 12:09:49] 2025-11-18 20:09:49,361 [wrapper] pandaids: 6891594166
[2025-11-18 12:09:49] 2025-11-18 20:09:49,398 [wrapper] cleanup supervisor_pilot 3159764 3159758
[2025-11-18 12:09:49] 2025-11-18 20:09:49,403 [wrapper] Test setup, not cleaning
[2025-11-18 12:09:49] 2025-11-18 20:09:49,424 [wrapper] apfmon messages muted
[2025-11-18 12:09:49] 2025-11-18 20:09:49,430 [wrapper] ==== wrapper stdout END ====
[2025-11-18 12:09:49] 2025-11-18 20:09:49,432 [wrapper] ==== wrapper stderr END ====
[2025-11-18 12:09:49]  *** Error codes and diagnostics ***
[2025-11-18 12:09:49]     "exeErrorCode": 65,
[2025-11-18 12:09:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-18 12:09:49]     "pilotErrorCode": 1305,
[2025-11-18 12:09:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-18 12:09:49]  *** Listing of results directory ***
[2025-11-18 12:09:49] total 403964
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc      5112 Nov 18 10:35 queuedata.json
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc    576529 Nov 18 10:36 pilot3.tar.gz
[2025-11-18 12:09:49] -rwx------. 1 boinc boinc     36292 Nov 18 10:37 runpilot2-wrapper.sh
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc       100 Nov 18 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-18 12:09:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 12:04 run_atlas
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc       105 Nov 18 12:04 job.xml
[2025-11-18 12:09:49] -rw-r--r--. 2 boinc boinc 409433615 Nov 18 12:04 EVNT.47493065._000753.pool.root.1
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc      6444 Nov 18 12:04 init_data.xml
[2025-11-18 12:09:49] -rw-r--r--. 2 boinc boinc     15120 Nov 18 12:04 start_atlas.sh
[2025-11-18 12:09:49] drwxrwx--x. 2 boinc boinc      4096 Nov 18 12:04 shared
[2025-11-18 12:09:49] -rw-r--r--. 2 boinc boinc    590097 Nov 18 12:04 input.tar.gz
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc         0 Nov 18 12:04 boinc_lockfile
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc      2773 Nov 18 12:04 pandaJob.out
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc    992790 Nov 18 12:04 agis_schedconf.cvmfs.json
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc   1525063 Nov 18 12:04 agis_ddmendpoints.agis.ALL.json
[2025-11-18 12:09:49] drwx------. 5 boinc boinc      4096 Nov 18 12:04 pilot3
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc       524 Nov 18 12:06 boinc_task_state.xml
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc       985 Nov 18 12:06 memory_monitor_summary.json
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc     48780 Nov 18 12:07 log.47493068._006178.job.log.tgz.1
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc        95 Nov 18 12:08 pilot_heartbeat.json
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc     10333 Nov 18 12:09 heartbeat.json
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc      8192 Nov 18 12:09 boinc_mmap_file
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc        23 Nov 18 12:09 wrapper_checkpoint.txt
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc      4551 Nov 18 12:09 pilotlog.txt
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc     99638 Nov 18 12:09 log.47493068._006178.job.log.1
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc       186 Nov 18 12:09 output.list
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc       620 Nov 18 12:09 runtime_log
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc    174080 Nov 18 12:09 result.tar.gz
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc       644 Nov 18 12:09 uJqNDm4kff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFHGKDmilYKWn.diag
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc      8526 Nov 18 12:09 runtime_log.err
[2025-11-18 12:09:49] -rw-r--r--. 1 boinc boinc     22438 Nov 18 12:09 stderr.txt
[2025-11-18 12:09:49] No HITS result produced
[2025-11-18 12:09:49]  *** Contents of shared directory: ***
[2025-11-18 12:09:49] total 400612
[2025-11-18 12:09:49] -rw-r--r--. 2 boinc boinc 409433615 Nov 18 12:04 ATLAS.root_0
[2025-11-18 12:09:49] -rw-r--r--. 2 boinc boinc     15120 Nov 18 12:04 start_atlas.sh
[2025-11-18 12:09:49] -rw-r--r--. 2 boinc boinc    590097 Nov 18 12:04 input.tar.gz
[2025-11-18 12:09:49] -rw-------. 1 boinc boinc    174080 Nov 18 12:09 result.tar.gz
12:09:51 (3153460): run_atlas exited; CPU time 49.094657
12:09:51 (3153460): called boinc_finish(0)

</stderr_txt>
]]>

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