Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:34 (513474): wrapper (7.7.26015): starting
10:30:34 (513474): wrapper: running run_atlas (--nthreads 3)
[2025-11-19 10:30:34] Arguments: --nthreads 3
[2025-11-19 10:30:34] Threads: 3
[2025-11-19 10:30:34] Checking for CVMFS
[2025-11-19 10:30:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 10:30:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 10:30:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 10:30:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 10:30:35] 2.9.2.0 371659 1059 55960 153037 3 81 32457917 36864001 0 130560 0 379946 99.495 232669 4647 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-19 10:30:35] CVMFS is ok
[2025-11-19 10:30:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 10:30:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 10:30:35] Further information can be found at the LHC@home message board.
[2025-11-19 10:30:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 10:30:35] Checking for apptainer binary...
[2025-11-19 10:30:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 10:30:35] Running /usr/bin/apptainer --version
[2025-11-19 10:30:35] apptainer version 1.4.1-1.1
[2025-11-19 10:30:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 10:30:35] cosA133a
[2025-11-19 10:30:35] apptainer works
[2025-11-19 10:30:35] Set ATHENA_PROC_NUMBER=3
[2025-11-19 10:30:35] Set ATHENA_CORE_NUMBER=3
[2025-11-19 10:30:35] Starting ATLAS job with PandaID=6891559072
[2025-11-19 10:30:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 19:12:33]  *** The last 200 lines of the pilot log: ***
[2025-11-19 19:12:33] 2025-11-19 18:12:13,372 | INFO     | monitor loop #2382: job 0:6891559072 is in state 'finished'
[2025-11-19 19:12:33] 2025-11-19 18:12:13,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 19:12:33] 2025-11-19 18:12:14,880 | INFO     | time since job start (31292s) is within the limit (172800.0s)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,075 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-19 19:12:33] 2025-11-19 18:12:15,076 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4092.913166666667
[2025-11-19 19:12:33] 2025-11-19 18:12:15,077 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891559072/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,077 | INFO     | extracted standard info from prmon json
[2025-11-19 19:12:33] 2025-11-19 18:12:15,077 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 19:12:33] 2025-11-19 18:12:15,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 19:12:33] 2025-11-19 18:12:15,080 | INFO     | fitting pss+swap vs Time
[2025-11-19 19:12:33] 2025-11-19 18:12:15,080 | INFO     | sum of square deviations: 41862857472.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,083 | INFO     | sum of deviations: 206803877316.99997
[2025-11-19 19:12:33] 2025-11-19 18:12:15,083 | INFO     | mean x: 1763560278.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,083 | INFO     | mean y: 2209568.4970760234
[2025-11-19 19:12:33] 2025-11-19 18:12:15,083 | INFO     | intersect: -8709835556.864555
[2025-11-19 19:12:33] 2025-11-19 18:12:15,083 | INFO     | chi2: 4.12471192195298
[2025-11-19 19:12:33] 2025-11-19 18:12:15,083 | INFO     | sum of square deviations: 40650685907.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,085 | INFO     | sum of deviations: 285812131549.50006
[2025-11-19 19:12:33] 2025-11-19 18:12:15,086 | INFO     | mean x: 1763560125.5
[2025-11-19 19:12:33] 2025-11-19 18:12:15,086 | INFO     | mean y: 2219482.683070866
[2025-11-19 19:12:33] 2025-11-19 18:12:15,086 | INFO     | intersect: -12397248505.08986
[2025-11-19 19:12:33] 2025-11-19 18:12:15,086 | INFO     | chi2: 2.5799088000643784
[2025-11-19 19:12:33] 2025-11-19 18:12:15,086 | INFO     | current chi2=2.5799088000643784 (change=37.45238821811255 %)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,086 | INFO     | sum of square deviations: 39462142692.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,088 | INFO     | sum of deviations: 281012085073.0001
[2025-11-19 19:12:33] 2025-11-19 18:12:15,088 | INFO     | mean x: 1763559973.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,088 | INFO     | mean y: 2218867.3499005963
[2025-11-19 19:12:33] 2025-11-19 18:12:15,088 | INFO     | intersect: -12556188541.796715
[2025-11-19 19:12:33] 2025-11-19 18:12:15,089 | INFO     | chi2: 2.579303732465011
[2025-11-19 19:12:33] 2025-11-19 18:12:15,089 | INFO     | current chi2=2.579303732465011 (change=0.023453061571482022 %)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,089 | INFO     | right removable region: 502
[2025-11-19 19:12:33] 2025-11-19 18:12:15,089 | INFO     | sum of square deviations: 40650685907.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,091 | INFO     | sum of deviations: 97850692584.5
[2025-11-19 19:12:33] 2025-11-19 18:12:15,091 | INFO     | mean x: 1763560430.5
[2025-11-19 19:12:33] 2025-11-19 18:12:15,091 | INFO     | mean y: 2223257.7972440943
[2025-11-19 19:12:33] 2025-11-19 18:12:15,091 | INFO     | intersect: -4242861559.069976
[2025-11-19 19:12:33] 2025-11-19 18:12:15,092 | INFO     | chi2: 1.9861731266187672
[2025-11-19 19:12:33] 2025-11-19 18:12:15,092 | INFO     | current chi2=1.9861731266187672 (change=51.84698557861107 %)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,092 | INFO     | sum of square deviations: 39462142692.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,094 | INFO     | sum of deviations: 61619456098.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,094 | INFO     | mean x: 1763560583.0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,094 | INFO     | mean y: 2227886.9701789264
[2025-11-19 19:12:33] 2025-11-19 18:12:15,094 | INFO     | intersect: -2751541586.940368
[2025-11-19 19:12:33] 2025-11-19 18:12:15,094 | INFO     | chi2: 1.6395920575458551
[2025-11-19 19:12:33] 2025-11-19 18:12:15,094 | INFO     | current chi2=1.6395920575458551 (change=17.4496907861666 %)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,094 | INFO     | left removable region: 20
[2025-11-19 19:12:33] 2025-11-19 18:12:15,095 | INFO     | sum of square deviations: 34723034300.5
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | sum of deviations: 120642985825.99998
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | mean x: 1763560552.5
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | mean y: 2239908.195020747
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | intersect: -6125139654.814153
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | chi2: 0.07504829355457268
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | current memory leak: 3.47 B/s (using 482 data points, chi2=0.08)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | could have reported an average CPU frequency of 4276 MHz (21 samples)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | ..............................
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . Timing measurements:
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . get job = 0 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . initial setup = 1 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . payload setup = 3 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . stage-in = 0 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . payload execution = 31263 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . stage-out = 1 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,097 | INFO     | . log creation = 0 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,098 | INFO     | ..............................
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | 
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | job summary report
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | --------------------------------------------------
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | PanDA job id: 6891559072
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | task id: 47493068
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | errors: (none)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | pilot state: finished 
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | transexitcode: 0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | exeerrorcode: 0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | exeerrordiag: 
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | exitcode: 0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | exitmsg: OK
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | cpuconsumptiontime: 92301 s
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | nevents: 1000
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | neventsw: 0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | pid: 523649
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | pgrp: 523649
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | corecount: 3
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | event service: False
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | sizes: {0: 2297199, 2: 2297461, 11: 2297489, 31270: 2337250, 31271: 2346250, 31274: 2346306, 31280: 2346680}
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | --------------------------------------------------
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | 
[2025-11-19 19:12:33] 2025-11-19 18:12:15,128 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | job 6891559072 has completed (purged errors)
[2025-11-19 19:12:33] 2025-11-19 18:12:15,141 | INFO     | overall cleanup function is called
[2025-11-19 19:12:33] 2025-11-19 18:12:16,149 | INFO     | --- collectZombieJob: --- 10, [523649]
[2025-11-19 19:12:33] 2025-11-19 18:12:16,149 | INFO     | zombie collector waiting for pid 523649
[2025-11-19 19:12:33] 2025-11-19 18:12:16,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 19:12:33] 2025-11-19 18:12:16,150 | INFO     | collected zombie processes
[2025-11-19 19:12:33] 2025-11-19 18:12:16,150 | INFO     | will attempt to kill all subprocesses of pid=523649
[2025-11-19 19:12:33] 2025-11-19 18:12:16,191 | INFO     | process IDs to be killed: [523649] (in reverse order)
[2025-11-19 19:12:33] 2025-11-19 18:12:16,216 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 19:12:33] 2025-11-19 18:12:16,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 19:12:33] 2025-11-19 18:12:16,217 | INFO     | did not find any defunct processes belonging to 523649
[2025-11-19 19:12:33] 2025-11-19 18:12:16,218 | INFO     | did not find any defunct processes belonging to 523649
[2025-11-19 19:12:33] 2025-11-19 18:12:16,219 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 19:12:33] 2025-11-19 18:12:16,219 | INFO     | ready for new job
[2025-11-19 19:12:33] 2025-11-19 18:12:16,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 19:12:33] 2025-11-19 18:12:16,220 | INFO     | ***************************************
[2025-11-19 19:12:33] 2025-11-19 18:12:16,220 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 19:12:33] 2025-11-19 18:12:16,220 | INFO     | ***************************************
[2025-11-19 19:12:33] 2025-11-19 18:12:16,220 | INFO     | 
[2025-11-19 19:12:33] 2025-11-19 18:12:16,221 | INFO     | architecture information:
[2025-11-19 19:12:33] 2025-11-19 18:12:16,221 | INFO     | executing command: cat /etc/os-release
[2025-11-19 19:12:33] 2025-11-19 18:12:16,230 | INFO     | cat /etc/os-release:
[2025-11-19 19:12:33] NAME="CentOS Linux"
[2025-11-19 19:12:33] VERSION="7 (Core)"
[2025-11-19 19:12:33] ID="centos"
[2025-11-19 19:12:33] ID_LIKE="rhel fedora"
[2025-11-19 19:12:33] VERSION_ID="7"
[2025-11-19 19:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 19:12:33] ANSI_COLOR="0;31"
[2025-11-19 19:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 19:12:33] HOME_URL="https://www.centos.org/"
[2025-11-19 19:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 19:12:33] 
[2025-11-19 19:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 19:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 19:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 19:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 19:12:33] 
[2025-11-19 19:12:33] 2025-11-19 18:12:16,230 | INFO     | ***************************************
[2025-11-19 19:12:33] 2025-11-19 18:12:16,733 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-19 19:12:33] 2025-11-19 18:12:16,746 | INFO     | sufficient remaining disk space (324587749376 B)
[2025-11-19 19:12:33] 2025-11-19 18:12:16,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | INFO     | update_server=False
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 19:12:33] 2025-11-19 18:12:16,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 19:12:33] 2025-11-19 18:12:16,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 19:12:33] 2025-11-19 18:12:16,882 | INFO     | aborting loop
[2025-11-19 19:12:33] 2025-11-19 18:12:17,101 | INFO     | all data control threads have been joined
[2025-11-19 19:12:33] 2025-11-19 18:12:17,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 19:12:33] 2025-11-19 18:12:17,512 | INFO     | all job control threads have been joined
[2025-11-19 19:12:33] 2025-11-19 18:12:17,717 | INFO     | all payload control threads have been joined
[2025-11-19 19:12:33] 2025-11-19 18:12:17,752 | INFO     | [job] retrieve thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:17,752 | INFO     | [job] queue monitor thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:17,888 | INFO     | [job] job monitor thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,107 | INFO     | [data] control thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,147 | INFO     | [payload] failed_post thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,175 | INFO     | [data] copytool_in thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,507 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,517 | INFO     | [job] control thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,532 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,722 | INFO     | [payload] control thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:18,819 | INFO     | [job] validate thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:19,073 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:19,210 | INFO     | [data] copytool_out thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:19,343 | INFO     | [payload] validate_post thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:20,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 19:12:33] 2025-11-19 18:12:24,234 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:26,835 | INFO     | job.realtimelogging is not enabled
[2025-11-19 19:12:33] 2025-11-19 18:12:27,428 | INFO     | [monitor] cgroup control has ended
[2025-11-19 19:12:33] 2025-11-19 18:12:27,840 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 19:12:33] 2025-11-19 18:12:28,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392588314432)>', '<ExcThread(monitor, started 140391743485696)>']
[2025-11-19 19:12:33] 2025-11-19 18:12:28,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 19:12:33] 2025-11-19 18:12:28,811 | INFO     | [monitor] control thread has ended
[2025-11-19 19:12:33] 2025-11-19 18:12:33,389 | INFO     | all workflow threads have been joined
[2025-11-19 19:12:33] 2025-11-19 18:12:33,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 19:12:33] 2025-11-19 18:12:33,390 | INFO     | traces error code: 0
[2025-11-19 19:12:33] 2025-11-19 18:12:33,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 19:12:33] 2025-11-19 18:12:33,436 [wrapper] ==== pilot stdout END ====
[2025-11-19 19:12:33] 2025-11-19 18:12:33,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 19:12:33] 2025-11-19 18:12:33,442 [wrapper] pilotpid: 517204
[2025-11-19 19:12:33] 2025-11-19 18:12:33,444 [wrapper] Pilot exit status: 0
[2025-11-19 19:12:33] 2025-11-19 18:12:33,451 [wrapper] pandaids: 6891559072
[2025-11-19 19:12:33] 2025-11-19 18:12:33,468 [wrapper] cleanup supervisor_pilot  578019 517205
[2025-11-19 19:12:33] 2025-11-19 18:12:33,471 [wrapper] Test setup, not cleaning
[2025-11-19 19:12:33] 2025-11-19 18:12:33,473 [wrapper] apfmon messages muted
[2025-11-19 19:12:33] 2025-11-19 18:12:33,476 [wrapper] ==== wrapper stdout END ====
[2025-11-19 19:12:33] 2025-11-19 18:12:33,478 [wrapper] ==== wrapper stderr END ====
[2025-11-19 19:12:33]  *** Error codes and diagnostics ***
[2025-11-19 19:12:33]     "exeErrorCode": 0,
[2025-11-19 19:12:33]     "exeErrorDiag": "",
[2025-11-19 19:12:33]     "pilotErrorCode": 0,
[2025-11-19 19:12:33]     "pilotErrorDiag": "",
[2025-11-19 19:12:33]  *** Listing of results directory ***
[2025-11-19 19:12:33] total 1314144
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-19 19:12:33] -rwx------ 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:24 queuedata.json
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc       100 Nov 19 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 19:12:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 19 10:30 run_atlas
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc       105 Nov 19 10:30 job.xml
[2025-11-19 19:12:33] -rw-r--r-- 2 boinc boinc 407937427 Nov 19 10:30 EVNT.47493065._000075.pool.root.1
[2025-11-19 19:12:33] -rw-r--r-- 2 boinc boinc    590101 Nov 19 10:30 input.tar.gz
[2025-11-19 19:12:33] -rw-r--r-- 2 boinc boinc     15120 Nov 19 10:30 start_atlas.sh
[2025-11-19 19:12:33] drwxrwx--x 2 boinc boinc      4096 Nov 19 10:30 shared
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc         0 Nov 19 10:30 boinc_setup_complete
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc      6199 Nov 19 10:30 init_data.xml
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc         0 Nov 19 10:30 boinc_lockfile
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc      2771 Nov 19 10:30 pandaJob.out
[2025-11-19 19:12:33] -rw------- 1 boinc boinc    989279 Nov 19 10:30 agis_schedconf.cvmfs.json
[2025-11-19 19:12:33] drwx------ 5 boinc boinc      4096 Nov 19 10:30 pilot3
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc       531 Nov 19 19:07 boinc_task_state.xml
[2025-11-19 19:12:33] -rw------- 1 boinc boinc        95 Nov 19 19:11 pilot_heartbeat.json
[2025-11-19 19:12:33] -rw------- 1 boinc boinc 922615079 Nov 19 19:11 HITS.47493068._000743.pool.root.1
[2025-11-19 19:12:33] -rw------- 1 boinc boinc      1026 Nov 19 19:12 memory_monitor_summary.json
[2025-11-19 19:12:33] -rw------- 1 boinc boinc   1525063 Nov 19 19:12 agis_ddmendpoints.agis.ALL.json
[2025-11-19 19:12:33] -rw------- 1 boinc boinc   1209395 Nov 19 19:12 log.47493068._000743.job.log.tgz.1
[2025-11-19 19:12:33] -rw------- 1 boinc boinc      8568 Nov 19 19:12 heartbeat.json
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc      8192 Nov 19 19:12 boinc_mmap_file
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc        28 Nov 19 19:12 wrapper_checkpoint.txt
[2025-11-19 19:12:33] -rw------- 1 boinc boinc      4628 Nov 19 19:12 pilotlog.txt
[2025-11-19 19:12:33] -rw------- 1 boinc boinc   4396667 Nov 19 19:12 log.47493068._000743.job.log.1
[2025-11-19 19:12:33] -rw------- 1 boinc boinc       353 Nov 19 19:12 output.list
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc       620 Nov 19 19:12 runtime_log
[2025-11-19 19:12:33] -rw------- 1 boinc boinc   5621760 Nov 19 19:12 result.tar.gz
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc      8788 Nov 19 19:12 runtime_log.err
[2025-11-19 19:12:33] -rw------- 1 boinc boinc       667 Nov 19 19:12 aIEMDmUkcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKLFKDmGoTALo.diag
[2025-11-19 19:12:33] -rw-r--r-- 1 boinc boinc     21142 Nov 19 19:12 stderr.txt
[2025-11-19 19:12:33] HITS file was successfully produced:
[2025-11-19 19:12:33] -rw------- 1 boinc boinc 922615079 Nov 19 19:11 shared/HITS.pool.root.1
[2025-11-19 19:12:33]  *** Contents of shared directory: ***
[2025-11-19 19:12:33] total 1305464
[2025-11-19 19:12:33] -rw-r--r-- 2 boinc boinc 407937427 Nov 19 10:30 ATLAS.root_0
[2025-11-19 19:12:33] -rw-r--r-- 2 boinc boinc    590101 Nov 19 10:30 input.tar.gz
[2025-11-19 19:12:33] -rw-r--r-- 2 boinc boinc     15120 Nov 19 10:30 start_atlas.sh
[2025-11-19 19:12:33] -rw------- 1 boinc boinc 922615079 Nov 19 19:11 HITS.pool.root.1
[2025-11-19 19:12:33] -rw------- 1 boinc boinc   5621760 Nov 19 19:12 result.tar.gz
19:12:34 (513474): run_atlas exited; CPU time 92394.550766
19:12:34 (513474): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN