Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:57:55 (2957836): wrapper (7.7.26015): starting
11:57:55 (2957836): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 11:57:55] Arguments: --nthreads 8
[2025-11-18 11:57:55] Threads: 8
[2025-11-18 11:57:55] Checking for CVMFS
[2025-11-18 11:57:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 11:57:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 11:57:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 11:57:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 11:57:56] 2.11.3.0 1070807 17313 224816 153012 1 256 35811722 45568000 8575 130560 0 118284998 99.809 60912379 18413 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-18 11:57:56] CVMFS is ok
[2025-11-18 11:57:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 11:57:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 11:57:56] Further information can be found at the LHC@home message board.
[2025-11-18 11:57:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 11:57:56] Checking for apptainer binary...
[2025-11-18 11:57:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 11:57:56] Running /usr/bin/apptainer --version
[2025-11-18 11:57:56] apptainer version 1.4.1-1.el9
[2025-11-18 11:57:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 11:57:56] wns0007.triumf.lcg
[2025-11-18 11:57:56] apptainer works
[2025-11-18 11:57:56] Set ATHENA_PROC_NUMBER=8
[2025-11-18 11:57:56] Set ATHENA_CORE_NUMBER=8
[2025-11-18 11:57:56] Starting ATLAS job with PandaID=6891592891
[2025-11-18 11:57:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-18 12:03:24]  *** The last 200 lines of the pilot log: ***
[2025-11-18 12:03:24] 2025-11-18 20:02:31,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:03:24] 2025-11-18 20:02:31,937 | WARNING  | wrong length of table data, x=[1763495958.0, 1763496019.0], y=[1647.0, 804021.0] (must be same and length>=4)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | ..............................
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . Timing measurements:
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . get job = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . initial setup = 4 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . payload setup = 13 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . stage-in = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . payload execution = 79 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . stage-out = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . log creation = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | ..............................
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891592891/pilotlog.txt
[2025-11-18 12:03:24] 2025-11-18 20:02:31,951 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-18 12:03:24] - Log from pilotlog.txt -
[2025-11-18 12:03:24] 2025-11-18 20:02:31,935 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891592891/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | INFO     | extracted standard info from prmon json
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 12:03:24] 2025-11-18 20:02:31,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:03:24] 2025-11-18 20:02:31,937 | WARNING  | wrong length of table data, x=[1763495958.0, 1763496019.0], y=[1647.0, 804021.0] (must be same and length>=4)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | ..............................
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . Timing measurements:
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . get job = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . initial setup = 4 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . payload setup = 13 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . stage-in = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . payload execution = 79 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . stage-out = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . log creation = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | ..............................
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891592891/pilotlog.txt
[2025-11-18 12:03:24] 2025-11-18 20:02:31,952 | WARNING  | 
[2025-11-18 12:03:24] [begin log extracts]
[2025-11-18 12:03:24] - Log from pilotlog.txt -
[2025-11-18 12:03:24] 2025-11-18 20:02:31,935 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891592891/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | INFO     | extracted standard info from prmon json
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 12:03:24] 2025-11-18 20:02:31,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 12:03:24] 2025-11-18 20:02:31,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:03:24] 2025-11-18 20:02:31,937 | WARNING  | wrong length of table data, x=[1763495958.0, 1763496019.0], y=[1647.0, 804021.0] (must be same and length>=4)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | ..............................
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . Timing measurements:
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . get job = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,938 | INFO     | . initial setup = 4 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . payload setup = 13 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . stage-in = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . payload execution = 79 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . stage-out = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | . log creation = 0 s
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | ..............................
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:03:24] 2025-11-18 20:02:31,939 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891592891/pilotlog.txt
[2025-11-18 12:03:24] [end log extracts]
[2025-11-18 12:03:24] 2025-11-18 20:02:31,952 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-18 12:03:24] 2025-11-18 20:02:31,953 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-18 12:03:24] 2025-11-18 20:02:32,022 | INFO     | 
[2025-11-18 12:03:24] 2025-11-18 20:02:32,022 | INFO     | job summary report
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | --------------------------------------------------
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | PanDA job id: 6891592891
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | task id: 47493068
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-18 12:00:21,222 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | pilot state: failed 
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | transexitcode: 65
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | exeerrorcode: 65
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | exitcode: 65
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | cpuconsumptiontime: 47 s
[2025-11-18 12:03:24] 2025-11-18 20:02:32,023 | INFO     | nevents: 0
[2025-11-18 12:03:24] 2025-11-18 20:02:32,024 | INFO     | neventsw: 0
[2025-11-18 12:03:24] 2025-11-18 20:02:32,024 | INFO     | pid: 2975267
[2025-11-18 12:03:24] 2025-11-18 20:02:32,024 | INFO     | pgrp: 2975267
[2025-11-18 12:03:24] 2025-11-18 20:02:32,024 | INFO     | corecount: 8
[2025-11-18 12:03:24] 2025-11-18 20:02:32,024 | INFO     | event service: False
[2025-11-18 12:03:24] 2025-11-18 20:02:32,024 | INFO     | sizes: {0: 2296371, 1: 2297224, 12: 2297426, 13: 2297514, 23: 2297570, 96: 2323111, 97: 2323215, 98: 2327533, 99: 2327561, 220: 2327727}
[2025-11-18 12:03:24] 2025-11-18 20:02:32,025 | INFO     | --------------------------------------------------
[2025-11-18 12:03:24] 2025-11-18 20:02:32,025 | INFO     | 
[2025-11-18 12:03:24] 2025-11-18 20:02:32,025 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-18 12:03:24] 2025-11-18 20:02:32,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-18 12:03:24] 2025-11-18 20:02:32,043 | INFO     | job 6891592891 has completed (purged errors)
[2025-11-18 12:03:24] 2025-11-18 20:02:32,044 | INFO     | overall cleanup function is called
[2025-11-18 12:03:24] 2025-11-18 20:02:33,060 | INFO     | --- collectZombieJob: --- 10, [2975267]
[2025-11-18 12:03:24] 2025-11-18 20:02:33,060 | INFO     | zombie collector waiting for pid 2975267
[2025-11-18 12:03:24] 2025-11-18 20:02:33,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-18 12:03:24] 2025-11-18 20:02:33,060 | INFO     | collected zombie processes
[2025-11-18 12:03:24] 2025-11-18 20:02:33,061 | INFO     | will attempt to kill all subprocesses of pid=2975267
[2025-11-18 12:03:24] 2025-11-18 20:02:33,481 | INFO     | process IDs to be killed: [2975267] (in reverse order)
[2025-11-18 12:03:24] 2025-11-18 20:02:33,553 | WARNING  | found no corresponding commands to process id(s)
[2025-11-18 12:03:24] 2025-11-18 20:02:33,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-18 12:03:24] 2025-11-18 20:02:33,561 | INFO     | did not find any defunct processes belonging to 2975267
[2025-11-18 12:03:24] 2025-11-18 20:02:33,569 | INFO     | did not find any defunct processes belonging to 2975267
[2025-11-18 12:03:24] 2025-11-18 20:02:33,570 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-18 12:03:24] 2025-11-18 20:02:33,570 | INFO     | ready for new job
[2025-11-18 12:03:24] 2025-11-18 20:02:33,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-18 12:03:24] 2025-11-18 20:02:33,572 | INFO     | ***************************************
[2025-11-18 12:03:24] 2025-11-18 20:02:33,572 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-18 12:03:24] 2025-11-18 20:02:33,573 | INFO     | ***************************************
[2025-11-18 12:03:24] 2025-11-18 20:02:33,573 | INFO     | 
[2025-11-18 12:03:24] 2025-11-18 20:02:33,574 | INFO     | architecture information:
[2025-11-18 12:03:24] 2025-11-18 20:02:33,575 | INFO     | executing command: cat /etc/os-release
[2025-11-18 12:03:24] 2025-11-18 20:02:33,588 | INFO     | cat /etc/os-release:
[2025-11-18 12:03:24] NAME="CentOS Linux"
[2025-11-18 12:03:24] VERSION="7 (Core)"
[2025-11-18 12:03:24] ID="centos"
[2025-11-18 12:03:24] ID_LIKE="rhel fedora"
[2025-11-18 12:03:24] VERSION_ID="7"
[2025-11-18 12:03:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-18 12:03:24] ANSI_COLOR="0;31"
[2025-11-18 12:03:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-18 12:03:24] HOME_URL="https://www.centos.org/"
[2025-11-18 12:03:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-18 12:03:24] 
[2025-11-18 12:03:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-18 12:03:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-18 12:03:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-18 12:03:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-18 12:03:24] 
[2025-11-18 12:03:24] 2025-11-18 20:02:33,589 | INFO     | ***************************************
[2025-11-18 12:03:24] 2025-11-18 20:02:34,092 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-18 12:03:24] 2025-11-18 20:02:34,209 | INFO     | sufficient remaining disk space (1276565782528 B)
[2025-11-18 12:03:24] 2025-11-18 20:02:34,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-18 12:03:24] 2025-11-18 20:02:34,210 | INFO     | current server update state: UPDATING_FINAL
[2025-11-18 12:03:24] 2025-11-18 20:02:34,210 | INFO     | update_server=False
[2025-11-18 12:03:24] 2025-11-18 20:02:34,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-18 12:03:24] 2025-11-18 20:02:34,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-18 12:03:24] 2025-11-18 20:02:34,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-18 12:03:24] 2025-11-18 20:02:34,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-18 12:03:24] 2025-11-18 20:02:34,503 | INFO     | aborting loop
[2025-11-18 12:03:24] 2025-11-18 20:02:34,916 | INFO     | all job control threads have been joined
[2025-11-18 12:03:24] 2025-11-18 20:02:34,953 | INFO     | all payload control threads have been joined
[2025-11-18 12:03:24] 2025-11-18 20:02:35,215 | INFO     | [job] retrieve thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,255 | INFO     | all data control threads have been joined
[2025-11-18 12:03:24] 2025-11-18 20:02:35,509 | INFO     | [job] job monitor thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,715 | INFO     | [data] copytool_in thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,739 | INFO     | [job] validate thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,841 | INFO     | [job] create_data_payload thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,921 | INFO     | [job] control thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,948 | INFO     | [payload] execute_payloads thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:35,959 | INFO     | [payload] control thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:36,008 | INFO     | [payload] validate_pre thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:36,010 | INFO     | [payload] validate_post thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:36,219 | INFO     | [data] copytool_out thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:36,260 | INFO     | [data] control thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:36,692 | INFO     | [payload] failed_post thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:37,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-18 12:03:24] 2025-11-18 20:02:38,039 | INFO     | [job] queue monitor thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:02:38,457 | INFO     | [data] queue_monitor thread has finished
[2025-11-18 12:03:24] 2025-11-18 20:03:04,887 | INFO     | PID=2963450 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-18 12:03:24] 2025-11-18 20:03:04,887 | INFO     | .. there are 18 such processes running
[2025-11-18 12:03:24] 2025-11-18 20:03:04,887 | INFO     | found 0 job(s) in 20 queues
[2025-11-18 12:03:24] 2025-11-18 20:03:04,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-18 12:03:24] 2025-11-18 20:03:04,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-18 12:03:24] 2025-11-18 20:03:18,265 | INFO     | [monitor] cgroup control has ended
[2025-11-18 12:03:24] 2025-11-18 20:03:18,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661778872128)>', '<ExcThread(monitor, started 139660634343168)>']
[2025-11-18 12:03:24] 2025-11-18 20:03:18,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-18 12:03:24] 2025-11-18 20:03:18,966 | INFO     | [monitor] control thread has ended
[2025-11-18 12:03:24] 2025-11-18 20:03:23,739 | INFO     | all workflow threads have been joined
[2025-11-18 12:03:24] 2025-11-18 20:03:23,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-18 12:03:24] 2025-11-18 20:03:23,740 | INFO     | traces error code: 0
[2025-11-18 12:03:24] 2025-11-18 20:03:23,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-18 12:03:24] 2025-11-18 20:03:23,994 [wrapper] ==== pilot stdout END ====
[2025-11-18 12:03:24] 2025-11-18 20:03:23,996 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-18 12:03:24] 2025-11-18 20:03:23,998 [wrapper] pilotpid: 2963450
[2025-11-18 12:03:24] 2025-11-18 20:03:24,002 [wrapper] Pilot exit status: 0
[2025-11-18 12:03:24] 2025-11-18 20:03:24,010 [wrapper] pandaids: 6891592891
[2025-11-18 12:03:24] 2025-11-18 20:03:24,042 [wrapper] cleanup supervisor_pilot 2963458 2963451
[2025-11-18 12:03:24] 2025-11-18 20:03:24,045 [wrapper] Test setup, not cleaning
[2025-11-18 12:03:24] 2025-11-18 20:03:24,046 [wrapper] apfmon messages muted
[2025-11-18 12:03:24] 2025-11-18 20:03:24,048 [wrapper] ==== wrapper stdout END ====
[2025-11-18 12:03:24] 2025-11-18 20:03:24,050 [wrapper] ==== wrapper stderr END ====
[2025-11-18 12:03:24]  *** Error codes and diagnostics ***
[2025-11-18 12:03:24]     "exeErrorCode": 65,
[2025-11-18 12:03:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-18 12:03:24]     "pilotErrorCode": 1305,
[2025-11-18 12:03:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-18 12:03:24]  *** Listing of results directory ***
[2025-11-18 12:03:24] total 404440
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc    576529 Nov 18 10:27 pilot3.tar.gz
[2025-11-18 12:03:24] -rwx------. 1 boinc boinc     36292 Nov 18 10:30 runpilot2-wrapper.sh
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc      5112 Nov 18 10:30 queuedata.json
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc       100 Nov 18 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-18 12:03:24] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 11:57 run_atlas
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc       105 Nov 18 11:57 job.xml
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc      6444 Nov 18 11:57 init_data.xml
[2025-11-18 12:03:24] -rw-r--r--. 2 boinc boinc 409935579 Nov 18 11:57 EVNT.47493065._000658.pool.root.1
[2025-11-18 12:03:24] -rw-r--r--. 2 boinc boinc     15120 Nov 18 11:57 start_atlas.sh
[2025-11-18 12:03:24] drwxrwx--x. 2 boinc boinc      4096 Nov 18 11:57 shared
[2025-11-18 12:03:24] -rw-r--r--. 2 boinc boinc    590090 Nov 18 11:57 input.tar.gz
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc         0 Nov 18 11:57 boinc_lockfile
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc      2772 Nov 18 11:57 pandaJob.out
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc    992790 Nov 18 11:58 agis_schedconf.cvmfs.json
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc   1525063 Nov 18 11:58 agis_ddmendpoints.agis.ALL.json
[2025-11-18 12:03:24] drwx------. 5 boinc boinc      4096 Nov 18 11:58 pilot3
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc       524 Nov 18 11:59 boinc_task_state.xml
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc       992 Nov 18 12:00 memory_monitor_summary.json
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc     47522 Nov 18 12:00 log.47493068._006077.job.log.tgz.1
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc        95 Nov 18 12:02 pilot_heartbeat.json
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc     10327 Nov 18 12:02 heartbeat.json
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc      8192 Nov 18 12:03 boinc_mmap_file
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc        23 Nov 18 12:03 wrapper_checkpoint.txt
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc      4823 Nov 18 12:03 pilotlog.txt
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc     99242 Nov 18 12:03 log.47493068._006077.job.log.1
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc       186 Nov 18 12:03 output.list
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc       620 Nov 18 12:03 runtime_log
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc    163840 Nov 18 12:03 result.tar.gz
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc       644 Nov 18 12:03 UGyNDmNeff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzFGKDmBPdrOn.diag
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc      8526 Nov 18 12:03 runtime_log.err
[2025-11-18 12:03:24] -rw-r--r--. 1 boinc boinc     22500 Nov 18 12:03 stderr.txt
[2025-11-18 12:03:24] No HITS result produced
[2025-11-18 12:03:24]  *** Contents of shared directory: ***
[2025-11-18 12:03:24] total 401088
[2025-11-18 12:03:24] -rw-r--r--. 2 boinc boinc 409935579 Nov 18 11:57 ATLAS.root_0
[2025-11-18 12:03:24] -rw-r--r--. 2 boinc boinc     15120 Nov 18 11:57 start_atlas.sh
[2025-11-18 12:03:24] -rw-r--r--. 2 boinc boinc    590090 Nov 18 11:57 input.tar.gz
[2025-11-18 12:03:24] -rw-------. 1 boinc boinc    163840 Nov 18 12:03 result.tar.gz
12:03:26 (2957836): run_atlas exited; CPU time 49.473493
12:03:26 (2957836): called boinc_finish(0)

</stderr_txt>
]]>

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