Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:54:48 (19729): wrapper (7.7.26015): starting
22:54:48 (19729): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:54:49] Arguments: --nthreads 8
[2025-11-21 22:54:49] Threads: 8
[2025-11-21 22:54:49] Checking for CVMFS
[2025-11-21 22:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:54:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:54:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:54:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:54:51] 2.11.2.0 2281 165542 135868 153145 2 230 13435633 25165825 4388 130560 2 53730163 99.896 25610291 2419 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 22:54:51] CVMFS is ok
[2025-11-21 22:54:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:54:51] Checking for apptainer binary...
[2025-11-21 22:54:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:54:51] Running /usr/bin/apptainer --version
[2025-11-21 22:54:51] apptainer version 1.3.2-1.el7
[2025-11-21 22:54:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:54:54] cg-vwn445.simple-grid.lan
[2025-11-21 22:54:54] apptainer works
[2025-11-21 22:54:54] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:54:54] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:54:54] Starting ATLAS job with PandaID=6891567740
[2025-11-21 22:54:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:21:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:21:05] 2025-11-22 23:19:58,910 | INFO     | time since job start (91302s) is within the limit (172800.0s)
[2025-11-23 00:21:05] 2025-11-22 23:20:00,651 | INFO     | monitor loop #6127: job 0:6891567740 is in state 'finished'
[2025-11-23 00:21:05] 2025-11-22 23:20:00,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:21:05] 2025-11-22 23:20:00,917 | INFO     | time since job start (91304s) is within the limit (172800.0s)
[2025-11-23 00:21:05] 2025-11-22 23:20:02,168 | INFO     | PID=23521 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 00:21:05] 2025-11-22 23:20:02,168 | INFO     | .. there are 9 such processes running
[2025-11-23 00:21:05] 2025-11-22 23:20:03,156 | INFO     | monitor loop #6128: job 0:6891567740 is in state 'finished'
[2025-11-23 00:21:05] 2025-11-22 23:20:03,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:21:05] 2025-11-22 23:20:03,169 | INFO     | time since job start (91307s) is within the limit (172800.0s)
[2025-11-23 00:21:05] 2025-11-22 23:20:05,176 | INFO     | time since job start (91309s) is within the limit (172800.0s)
[2025-11-23 00:21:05] 2025-11-22 23:20:05,665 | INFO     | monitor loop #6129: job 0:6891567740 is in state 'finished'
[2025-11-23 00:21:05] 2025-11-22 23:20:05,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:21:05] 2025-11-22 23:20:07,183 | INFO     | time since job start (91311s) is within the limit (172800.0s)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,171 | INFO     | monitor loop #6130: job 0:6891567740 is in state 'finished'
[2025-11-23 00:21:05] 2025-11-22 23:20:08,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,495 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 00:21:05] 2025-11-22 23:20:08,496 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 00:21:05] 2025-11-22 23:20:08,498 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6891567740/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,499 | INFO     | extracted standard info from prmon json
[2025-11-23 00:21:05] 2025-11-22 23:20:08,499 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 00:21:05] 2025-11-22 23:20:08,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 00:21:05] 2025-11-22 23:20:08,527 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:21:05] 2025-11-22 23:20:08,529 | INFO     | sum of square deviations: 1019555697753.6301
[2025-11-23 00:21:05] 2025-11-22 23:20:08,610 | INFO     | sum of deviations: 4227563733833.8057
[2025-11-23 00:21:05] 2025-11-22 23:20:08,611 | INFO     | mean x: 1763808118.3201077
[2025-11-23 00:21:05] 2025-11-22 23:20:08,611 | INFO     | mean y: 2835413.4646940148
[2025-11-23 00:21:05] 2025-11-22 23:20:08,611 | INFO     | intersect: -7310753486.956106
[2025-11-23 00:21:05] 2025-11-22 23:20:08,613 | INFO     | chi2: 27.67571194161693
[2025-11-23 00:21:05] 2025-11-22 23:20:08,615 | INFO     | sum of square deviations: 1009306141482.3849
[2025-11-23 00:21:05] 2025-11-22 23:20:08,681 | INFO     | sum of deviations: 4713118345117.703
[2025-11-23 00:21:05] 2025-11-22 23:20:08,682 | INFO     | mean x: 1763807965.8245614
[2025-11-23 00:21:05] 2025-11-22 23:20:08,682 | INFO     | mean y: 2842636.8873144398
[2025-11-23 00:21:05] 2025-11-22 23:20:08,682 | INFO     | intersect: -8233544064.16157
[2025-11-23 00:21:05] 2025-11-22 23:20:08,684 | INFO     | chi2: 24.558004547222303
[2025-11-23 00:21:05] 2025-11-22 23:20:08,686 | INFO     | current chi2=24.558004547222303 (change=11.265138909421959 %)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,686 | INFO     | right removable region: 1481
[2025-11-23 00:21:05] 2025-11-22 23:20:08,689 | INFO     | sum of square deviations: 1009304944052.3861
[2025-11-23 00:21:05] 2025-11-22 23:20:08,750 | INFO     | sum of deviations: 3585990667506.918
[2025-11-23 00:21:05] 2025-11-22 23:20:08,751 | INFO     | mean x: 1763808270.8245614
[2025-11-23 00:21:05] 2025-11-22 23:20:08,751 | INFO     | mean y: 2844958.403508772
[2025-11-23 00:21:05] 2025-11-22 23:20:08,751 | INFO     | intersect: -6263843851.27709
[2025-11-23 00:21:05] 2025-11-22 23:20:08,753 | INFO     | chi2: 22.56865605465812
[2025-11-23 00:21:05] 2025-11-22 23:20:08,753 | INFO     | current chi2=22.56865605465812 (change=18.453205098146558 %)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,753 | INFO     | left removable region: 10
[2025-11-23 00:21:05] 2025-11-22 23:20:08,755 | INFO     | sum of square deviations: 986997034345.4429
[2025-11-23 00:21:05] 2025-11-22 23:20:08,818 | INFO     | sum of deviations: 3602135775185.4004
[2025-11-23 00:21:05] 2025-11-22 23:20:08,818 | INFO     | mean x: 1763808240.3344665
[2025-11-23 00:21:05] 2025-11-22 23:20:08,818 | INFO     | mean y: 2862858.3650577837
[2025-11-23 00:21:05] 2025-11-22 23:20:08,818 | INFO     | intersect: -6434316324.538052
[2025-11-23 00:21:05] 2025-11-22 23:20:08,820 | INFO     | chi2: 14.366564938389828
[2025-11-23 00:21:05] 2025-11-22 23:20:08,820 | INFO     | current memory leak: 3.65 B/s (using 1471 data points, chi2=14.37)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,823 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,823 | INFO     | ..............................
[2025-11-23 00:21:05] 2025-11-22 23:20:08,823 | INFO     | . Timing measurements:
[2025-11-23 00:21:05] 2025-11-22 23:20:08,823 | INFO     | . get job = 0 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,823 | INFO     | . initial setup = 3 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,824 | INFO     | . payload setup = 155 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,824 | INFO     | . stage-in = 0 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,824 | INFO     | . payload execution = 90855 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,824 | INFO     | . stage-out = 11 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,824 | INFO     | . log creation = 1 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,824 | INFO     | ..............................
[2025-11-23 00:21:05] 2025-11-22 23:20:08,944 | INFO     | 
[2025-11-23 00:21:05] 2025-11-22 23:20:08,944 | INFO     | job summary report
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | --------------------------------------------------
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | PanDA job id: 6891567740
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | task id: 47493068
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | errors: (none)
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | pilot state: finished 
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | transexitcode: 0
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | exeerrorcode: 0
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | exeerrordiag: 
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | exitcode: 0
[2025-11-23 00:21:05] 2025-11-22 23:20:08,945 | INFO     | exitmsg: OK
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | cpuconsumptiontime: 335042 s
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | nevents: 1000
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | neventsw: 0
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | pid: 30127
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | pgrp: 30127
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | corecount: 8
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | event service: False
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | sizes: {0: 2297968, 1: 2298654, 2: 2298853, 13: 2298853, 24: 2298909, 34: 2298937, 45: 2299093, 56: 2299121, 67: 2299149, 77: 2299177, 88: 2299233, 92: 2299803, 99
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | --------------------------------------------------
[2025-11-23 00:21:05] 2025-11-22 23:20:08,946 | INFO     | 
[2025-11-23 00:21:05] 2025-11-22 23:20:08,947 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-23 00:21:05] 2025-11-22 23:20:09,190 | INFO     | time since job start (91313s) is within the limit (172800.0s)
[2025-11-23 00:21:05] 2025-11-22 23:20:09,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:21:05] 2025-11-22 23:20:09,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:21:05] 2025-11-22 23:20:09,428 | INFO     | job 6891567740 has completed (purged errors)
[2025-11-23 00:21:05] 2025-11-22 23:20:09,428 | INFO     | overall cleanup function is called
[2025-11-23 00:21:05] 2025-11-22 23:20:10,445 | INFO     | --- collectZombieJob: --- 10, [30127]
[2025-11-23 00:21:05] 2025-11-22 23:20:10,445 | INFO     | zombie collector waiting for pid 30127
[2025-11-23 00:21:05] 2025-11-22 23:20:10,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:21:05] 2025-11-22 23:20:10,446 | INFO     | collected zombie processes
[2025-11-23 00:21:05] 2025-11-22 23:20:10,446 | INFO     | will attempt to kill all subprocesses of pid=30127
[2025-11-23 00:21:05] 2025-11-22 23:20:10,549 | INFO     | process IDs to be killed: [30127] (in reverse order)
[2025-11-23 00:21:05] 2025-11-22 23:20:10,628 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:21:05] 2025-11-22 23:20:10,629 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:21:05] 2025-11-22 23:20:10,633 | INFO     | did not find any defunct processes belonging to 30127
[2025-11-23 00:21:05] 2025-11-22 23:20:10,637 | INFO     | did not find any defunct processes belonging to 30127
[2025-11-23 00:21:05] 2025-11-22 23:20:10,639 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:21:05] 2025-11-22 23:20:10,640 | INFO     | ready for new job
[2025-11-23 00:21:05] 2025-11-22 23:20:10,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:21:05] 2025-11-22 23:20:10,647 | INFO     | ***************************************
[2025-11-23 00:21:05] 2025-11-22 23:20:10,647 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:21:05] 2025-11-22 23:20:10,647 | INFO     | ***************************************
[2025-11-23 00:21:05] 2025-11-22 23:20:10,647 | INFO     | 
[2025-11-23 00:21:05] 2025-11-22 23:20:10,648 | INFO     | pilot is running in a VM
[2025-11-23 00:21:05] 2025-11-22 23:20:10,648 | INFO     | architecture information:
[2025-11-23 00:21:05] 2025-11-22 23:20:10,649 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:21:05] 2025-11-22 23:20:10,732 | INFO     | cat /etc/os-release:
[2025-11-23 00:21:05] NAME="CentOS Linux"
[2025-11-23 00:21:05] VERSION="7 (Core)"
[2025-11-23 00:21:05] ID="centos"
[2025-11-23 00:21:05] ID_LIKE="rhel fedora"
[2025-11-23 00:21:05] VERSION_ID="7"
[2025-11-23 00:21:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:21:05] ANSI_COLOR="0;31"
[2025-11-23 00:21:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:21:05] HOME_URL="https://www.centos.org/"
[2025-11-23 00:21:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:21:05] 
[2025-11-23 00:21:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:21:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:21:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:21:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:21:05] 
[2025-11-23 00:21:05] 2025-11-22 23:20:10,732 | INFO     | ***************************************
[2025-11-23 00:21:05] 2025-11-22 23:20:11,235 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-23 00:21:05] 2025-11-22 23:20:11,490 | INFO     | sufficient remaining disk space (494966669312 B)
[2025-11-23 00:21:05] 2025-11-22 23:20:11,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:21:05] 2025-11-22 23:20:11,490 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:21:05] 2025-11-22 23:20:11,490 | INFO     | update_server=False
[2025-11-23 00:21:05] 2025-11-22 23:20:11,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:21:05] 2025-11-22 23:20:11,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:21:05] 2025-11-22 23:20:11,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:21:05] 2025-11-22 23:20:11,685 | INFO     | aborting loop
[2025-11-23 00:21:05] 2025-11-22 23:20:11,952 | INFO     | all job control threads have been joined
[2025-11-23 00:21:05] 2025-11-22 23:20:12,250 | INFO     | all data control threads have been joined
[2025-11-23 00:21:05] 2025-11-22 23:20:12,496 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:12,691 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:12,815 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:12,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:21:05] 2025-11-22 23:20:12,860 | INFO     | all payload control threads have been joined
[2025-11-23 00:21:05] 2025-11-22 23:20:12,958 | INFO     | [job] control thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,091 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,116 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,256 | INFO     | [data] control thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,277 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,309 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,316 | INFO     | [job] validate thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,498 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,758 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,866 | INFO     | [payload] control thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,885 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:13,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:21:05] 2025-11-22 23:20:14,966 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:16,863 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:21:05] 2025-11-22 23:20:42,412 | INFO     | PID=23521 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 00:21:05] 2025-11-22 23:20:42,413 | INFO     | .. there are 9 such processes running
[2025-11-23 00:21:05] 2025-11-22 23:20:42,415 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:21:05] 2025-11-22 23:20:42,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:21:05] 2025-11-22 23:20:42,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:21:05] 2025-11-22 23:20:55,667 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:21:05] 2025-11-22 23:20:56,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851929745216)>', '<ExcThread(monitor, started 139851374520064)>']
[2025-11-23 00:21:05] 2025-11-22 23:20:57,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:21:05] 2025-11-22 23:20:57,502 | INFO     | [monitor] control thread has ended
[2025-11-23 00:21:05] 2025-11-22 23:21:01,906 | INFO     | all workflow threads have been joined
[2025-11-23 00:21:05] 2025-11-22 23:21:01,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:21:05] 2025-11-22 23:21:01,907 | INFO     | traces error code: 0
[2025-11-23 00:21:05] 2025-11-22 23:21:01,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:21:05] 2025-11-22 23:21:02,207 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:21:05] 2025-11-22 23:21:02,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:21:05] 2025-11-22 23:21:02,283 [wrapper] pilotpid: 23521
[2025-11-23 00:21:05] 2025-11-22 23:21:02,318 [wrapper] Pilot exit status: 0
[2025-11-23 00:21:05] 2025-11-22 23:21:02,433 [wrapper] pandaids: 6891567740
[2025-11-23 00:21:05] 2025-11-22 23:21:03,466 [wrapper] cleanup supervisor_pilot  8589 23522
[2025-11-23 00:21:05] 2025-11-22 23:21:03,618 [wrapper] Test setup, not cleaning
[2025-11-23 00:21:05] 2025-11-22 23:21:03,716 [wrapper] apfmon messages muted
[2025-11-23 00:21:05] 2025-11-22 23:21:03,846 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:21:05] 2025-11-22 23:21:03,956 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:21:05]  *** Error codes and diagnostics ***
[2025-11-23 00:21:05]     "exeErrorCode": 0,
[2025-11-23 00:21:05]     "exeErrorDiag": "",
[2025-11-23 00:21:05]     "pilotErrorCode": 0,
[2025-11-23 00:21:05]     "pilotErrorDiag": "",
[2025-11-23 00:21:05]  *** Listing of results directory ***
[2025-11-23 00:21:05] total 1331968
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:32 queuedata.json
[2025-11-23 00:21:05] -rwx------. 1 boinc boinc     36292 Nov 18 16:33 runpilot2-wrapper.sh
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc       100 Nov 21 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:21:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 22:54 run_atlas
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc       105 Nov 21 22:54 job.xml
[2025-11-23 00:21:05] -rw-r--r--. 2 boinc boinc 412155525 Nov 21 22:54 EVNT.47493065._000171.pool.root.1
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc      6391 Nov 21 22:54 init_data.xml
[2025-11-23 00:21:05] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:54 start_atlas.sh
[2025-11-23 00:21:05] drwxrwx--x. 2 boinc boinc        68 Nov 21 22:54 shared
[2025-11-23 00:21:05] -rw-r--r--. 2 boinc boinc    590104 Nov 21 22:54 input.tar.gz
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc         0 Nov 21 22:54 boinc_lockfile
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc      2773 Nov 21 22:54 pandaJob.out
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc    989798 Nov 21 22:58 agis_schedconf.cvmfs.json
[2025-11-23 00:21:05] drwx------. 5 boinc boinc      4096 Nov 21 22:58 pilot3
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc       533 Nov 22 23:54 boinc_task_state.xml
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc 918422272 Nov 23 00:17 HITS.47493068._001709.pool.root.1
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc      1031 Nov 23 00:18 memory_monitor_summary.json
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc   1526164 Nov 23 00:18 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc   2553178 Nov 23 00:18 log.47493068._001709.job.log.tgz.1
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc      8640 Nov 23 00:20 heartbeat.json
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc        95 Nov 23 00:20 pilot_heartbeat.json
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc        29 Nov 23 00:20 wrapper_checkpoint.txt
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc      8192 Nov 23 00:20 boinc_mmap_file
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc      4885 Nov 23 00:21 pilotlog.txt
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc  12167893 Nov 23 00:21 log.47493068._001709.job.log.1
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc       353 Nov 23 00:21 output.list
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc       620 Nov 23 00:21 runtime_log
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc  14745600 Nov 23 00:21 result.tar.gz
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc      8717 Nov 23 00:21 runtime_log.err
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc       662 Nov 23 00:21 5FQODmWtcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAJFKDmhsM9rm.diag
[2025-11-23 00:21:05] -rw-r--r--. 1 boinc boinc     21510 Nov 23 00:21 stderr.txt
[2025-11-23 00:21:05] HITS file was successfully produced:
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc 918422272 Nov 23 00:17 shared/HITS.pool.root.1
[2025-11-23 00:21:05]  *** Contents of shared directory: ***
[2025-11-23 00:21:05] total 1314392
[2025-11-23 00:21:05] -rw-r--r--. 2 boinc boinc 412155525 Nov 21 22:54 ATLAS.root_0
[2025-11-23 00:21:05] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:54 start_atlas.sh
[2025-11-23 00:21:05] -rw-r--r--. 2 boinc boinc    590104 Nov 21 22:54 input.tar.gz
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc 918422272 Nov 23 00:17 HITS.pool.root.1
[2025-11-23 00:21:05] -rw-------. 1 boinc boinc  14745600 Nov 23 00:21 result.tar.gz
00:21:07 (19729): run_atlas exited; CPU time 335603.406993
00:21:07 (19729): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN