Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:05:00 (621656): wrapper (7.7.26015): starting
22:05:00 (621656): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 22:05:00] Arguments: --nthreads 8
[2025-11-18 22:05:00] Threads: 8
[2025-11-18 22:05:00] Checking for CVMFS
[2025-11-18 22:05:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 22:05:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 22:05:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 22:05:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 22:05:02] 2.13.3.0 16090 19358 345416 153027 1 148 30521275 32935936 51061 16776704 0 271742667 99.612 255555912 56034 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-18 22:05:02] CVMFS is ok
[2025-11-18 22:05:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 22:05:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 22:05:02] Further information can be found at the LHC@home message board.
[2025-11-18 22:05:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 22:05:02] Checking for apptainer binary...
[2025-11-18 22:05:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 22:05:02] Running /usr/bin/apptainer --version
[2025-11-18 22:05:02] apptainer version 1.4.4-1.el9
[2025-11-18 22:05:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 22:05:03] c7-9-15.aglt2.org
[2025-11-18 22:05:03] apptainer works
[2025-11-18 22:05:03] Set ATHENA_PROC_NUMBER=8
[2025-11-18 22:05:03] Set ATHENA_CORE_NUMBER=8
[2025-11-18 22:05:03] Starting ATLAS job with PandaID=6891550275
[2025-11-18 22:05:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:20:08 (621656): BOINC client no longer exists - exiting
13:20:08 (621656): timer handler: client dead, exiting
13:27:52 (295148): wrapper (7.7.26015): starting
13:27:52 (295148): wrapper: running run_atlas (--nthreads 10)
[2025-11-19 13:27:52] Arguments: --nthreads 10
[2025-11-19 13:27:52] Threads: 10
[2025-11-19 13:27:52] This job has been restarted, cleaning up previous attempt
[2025-11-19 13:27:52] Checking for CVMFS
[2025-11-19 13:27:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 13:27:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 13:27:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 13:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 13:27:54] 2.13.3.0 16090 20281 348644 153053 1 342 24753765 32935937 36820 16776704 0 286519135 99.617 264558846 55305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 13:27:54] CVMFS is ok
[2025-11-19 13:27:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 13:27:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 13:27:54] Further information can be found at the LHC@home message board.
[2025-11-19 13:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 13:27:54] Checking for apptainer binary...
[2025-11-19 13:27:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 13:27:54] Running /usr/bin/apptainer --version
[2025-11-19 13:27:54] apptainer version 1.4.4-1.el9
[2025-11-19 13:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 13:27:54] c7-9-15.aglt2.org
[2025-11-19 13:27:54] apptainer works
[2025-11-19 13:27:54] Set ATHENA_PROC_NUMBER=10
[2025-11-19 13:27:54] Set ATHENA_CORE_NUMBER=10
[2025-11-19 13:27:54] Starting ATLAS job with PandaID=6891550275
[2025-11-19 13:27:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:49:29 (1724892): wrapper (7.7.26015): starting
15:49:29 (1724892): wrapper: running run_atlas (--nthreads 12)
[2025-11-19 15:49:29] Arguments: --nthreads 12
[2025-11-19 15:49:29] Threads: 12
[2025-11-19 15:49:29] This job has been restarted, cleaning up previous attempt
[2025-11-19 15:49:29] Checking for CVMFS
[2025-11-19 15:49:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 15:49:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 15:49:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 15:49:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 15:49:30] 2.13.3.0 16090 20423 395096 153056 0 1053 17330674 32935936 34900 16776704 0 289316347 99.617 267673669 55256 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 15:49:30] CVMFS is ok
[2025-11-19 15:49:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 15:49:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 15:49:30] Further information can be found at the LHC@home message board.
[2025-11-19 15:49:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 15:49:30] Checking for apptainer binary...
[2025-11-19 15:49:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 15:49:30] Running /usr/bin/apptainer --version
[2025-11-19 15:49:30] apptainer version 1.4.4-1.el9
[2025-11-19 15:49:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 15:49:30] c7-9-15.aglt2.org
[2025-11-19 15:49:30] apptainer works
[2025-11-19 15:49:30] Set ATHENA_PROC_NUMBER=12
[2025-11-19 15:49:30] Set ATHENA_CORE_NUMBER=12
[2025-11-19 15:49:30] Starting ATLAS job with PandaID=6891550275
[2025-11-19 15:49:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 04:22:27]  *** The last 200 lines of the pilot log: ***
[2025-11-20 04:22:27] 2025-11-20 09:21:17,548 | INFO     | time since job start (45096s) is within the limit (172800.0s)
[2025-11-20 04:22:27] 2025-11-20 09:21:18,627 | INFO     | monitor loop #2541: job 0:6891550275 is in state 'finished'
[2025-11-20 04:22:27] 2025-11-20 09:21:18,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,018 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-20 04:22:27] 2025-11-20 09:21:19,027 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.9398437499995
[2025-11-20 04:22:27] 2025-11-20 09:21:19,054 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891550275/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,055 | INFO     | extracted standard info from prmon json
[2025-11-20 04:22:27] 2025-11-20 09:21:19,055 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 04:22:27] 2025-11-20 09:21:19,055 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 04:22:27] 2025-11-20 09:21:19,069 | INFO     | fitting pss+swap vs Time
[2025-11-20 04:22:27] 2025-11-20 09:21:19,069 | INFO     | sum of square deviations: 125128884266.88239
[2025-11-20 04:22:27] 2025-11-20 09:21:19,080 | INFO     | sum of deviations: 996722601544.2501
[2025-11-20 04:22:27] 2025-11-20 09:21:19,080 | INFO     | mean x: 1763607925.0649526
[2025-11-20 04:22:27] 2025-11-20 09:21:19,080 | INFO     | mean y: 3464395.7239512857
[2025-11-20 04:22:27] 2025-11-20 09:21:19,084 | INFO     | intersect: -14044673965.564365
[2025-11-20 04:22:27] 2025-11-20 09:21:19,085 | INFO     | chi2: 8.813179679563994
[2025-11-20 04:22:27] 2025-11-20 09:21:19,085 | INFO     | sum of square deviations: 122606353532.91666
[2025-11-20 04:22:27] 2025-11-20 09:21:19,130 | INFO     | sum of deviations: 1337129668926.4045
[2025-11-20 04:22:27] 2025-11-20 09:21:19,130 | INFO     | mean x: 1763607772.579019
[2025-11-20 04:22:27] 2025-11-20 09:21:19,130 | INFO     | mean y: 3484975.2861035424
[2025-11-20 04:22:27] 2025-11-20 09:21:19,130 | INFO     | intersect: -19230202424.376335
[2025-11-20 04:22:27] 2025-11-20 09:21:19,130 | INFO     | chi2: 4.702036032621141
[2025-11-20 04:22:27] 2025-11-20 09:21:19,131 | INFO     | current chi2=4.702036032621141 (change=46.647677642108846 %)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,131 | INFO     | sum of square deviations: 120117962973.65714
[2025-11-20 04:22:27] 2025-11-20 09:21:19,150 | INFO     | sum of deviations: 1587754774635.1548
[2025-11-20 04:22:27] 2025-11-20 09:21:19,150 | INFO     | mean x: 1763607620.0932784
[2025-11-20 04:22:27] 2025-11-20 09:21:19,150 | INFO     | mean y: 3500316.1742112483
[2025-11-20 04:22:27] 2025-11-20 09:21:19,150 | INFO     | intersect: -23308387015.782516
[2025-11-20 04:22:27] 2025-11-20 09:21:19,150 | INFO     | chi2: 2.216043750318537
[2025-11-20 04:22:27] 2025-11-20 09:21:19,150 | INFO     | current chi2=2.216043750318537 (change=52.87054937596453 %)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,151 | INFO     | sum of square deviations: 117663391461.02187
[2025-11-20 04:22:27] 2025-11-20 09:21:19,165 | INFO     | sum of deviations: 1645310102783.6558
[2025-11-20 04:22:27] 2025-11-20 09:21:19,165 | INFO     | mean x: 1763607467.6049724
[2025-11-20 04:22:27] 2025-11-20 09:21:19,165 | INFO     | mean y: 3503873.98480663
[2025-11-20 04:22:27] 2025-11-20 09:21:19,165 | INFO     | intersect: -24657362583.841156
[2025-11-20 04:22:27] 2025-11-20 09:21:19,166 | INFO     | chi2: 1.8206477403545624
[2025-11-20 04:22:27] 2025-11-20 09:21:19,166 | INFO     | current chi2=1.8206477403545624 (change=17.84242797134036 %)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,166 | INFO     | right removable region: 723
[2025-11-20 04:22:27] 2025-11-20 09:21:19,170 | INFO     | sum of square deviations: 122605782094.09427
[2025-11-20 04:22:27] 2025-11-20 09:21:19,181 | INFO     | sum of deviations: 802161321554.9006
[2025-11-20 04:22:27] 2025-11-20 09:21:19,181 | INFO     | mean x: 1763608077.56812
[2025-11-20 04:22:27] 2025-11-20 09:21:19,181 | INFO     | mean y: 3476128.7820163486
[2025-11-20 04:22:27] 2025-11-20 09:21:19,181 | INFO     | intersect: -11535116603.50222
[2025-11-20 04:22:27] 2025-11-20 09:21:19,182 | INFO     | chi2: 7.1788388065598605
[2025-11-20 04:22:27] 2025-11-20 09:21:19,182 | INFO     | current chi2=7.1788388065598605 (change=18.544281773737627 %)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,182 | INFO     | left removable region: 10
[2025-11-20 04:22:27] 2025-11-20 09:21:19,186 | INFO     | sum of square deviations: 112381020909.12755
[2025-11-20 04:22:27] 2025-11-20 09:21:19,196 | INFO     | sum of deviations: 1374163072911.3777
[2025-11-20 04:22:27] 2025-11-20 09:21:19,196 | INFO     | mean x: 1763607742.0981767
[2025-11-20 04:22:27] 2025-11-20 09:21:19,197 | INFO     | mean y: 3520385.137447405
[2025-11-20 04:22:27] 2025-11-20 09:21:19,197 | INFO     | intersect: -21561372109.04608
[2025-11-20 04:22:27] 2025-11-20 09:21:19,197 | INFO     | chi2: 0.06844225216234288
[2025-11-20 04:22:27] 2025-11-20 09:21:19,197 | INFO     | current memory leak: 12.23 B/s (using 713 data points, chi2=0.07)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,198 | INFO     | could have reported an average CPU frequency of 3779 MHz (28 samples)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,198 | INFO     | ..............................
[2025-11-20 04:22:27] 2025-11-20 09:21:19,198 | INFO     | . Timing measurements:
[2025-11-20 04:22:27] 2025-11-20 09:21:19,198 | INFO     | . get job = 0 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,198 | INFO     | . initial setup = 1 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,198 | INFO     | . payload setup = 7 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,198 | INFO     | . stage-in = 0 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,202 | INFO     | . payload execution = 45033 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,202 | INFO     | . stage-out = 5 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,202 | INFO     | . log creation = 1 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,202 | INFO     | ..............................
[2025-11-20 04:22:27] 2025-11-20 09:21:19,261 | INFO     | 
[2025-11-20 04:22:27] 2025-11-20 09:21:19,261 | INFO     | job summary report
[2025-11-20 04:22:27] 2025-11-20 09:21:19,261 | INFO     | --------------------------------------------------
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | PanDA job id: 6891550275
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | task id: 47493068
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | errors: (none)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | pilot state: finished 
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | transexitcode: 0
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | exeerrorcode: 0
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | exeerrordiag: 
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | exitcode: 0
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | exitmsg: OK
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | cpuconsumptiontime: 143594 s
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | nevents: 1000
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | neventsw: 0
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | pid: 1814792
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | pgrp: 1814792
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | corecount: 12
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | event service: False
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | sizes: {0: 2297025, 1: 2297224, 6: 2297486, 11: 2297514, 45044: 2343045, 45050: 2352039, 45054: 2352223, 45082: 2352469}
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | --------------------------------------------------
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | 
[2025-11-20 04:22:27] 2025-11-20 09:21:19,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,289 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 04:22:27] 2025-11-20 09:21:19,290 | INFO     | job 6891550275 has completed (purged errors)
[2025-11-20 04:22:27] 2025-11-20 09:21:19,290 | INFO     | overall cleanup function is called
[2025-11-20 04:22:27] 2025-11-20 09:21:20,319 | INFO     | --- collectZombieJob: --- 10, [1814792]
[2025-11-20 04:22:27] 2025-11-20 09:21:20,320 | INFO     | zombie collector waiting for pid 1814792
[2025-11-20 04:22:27] 2025-11-20 09:21:20,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 04:22:27] 2025-11-20 09:21:20,320 | INFO     | collected zombie processes
[2025-11-20 04:22:27] 2025-11-20 09:21:20,320 | INFO     | will attempt to kill all subprocesses of pid=1814792
[2025-11-20 04:22:27] 2025-11-20 09:21:21,031 | INFO     | process IDs to be killed: [1814792] (in reverse order)
[2025-11-20 04:22:27] 2025-11-20 09:21:21,273 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 04:22:27] 2025-11-20 09:21:21,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 04:22:27] 2025-11-20 09:21:21,333 | INFO     | did not find any defunct processes belonging to 1814792
[2025-11-20 04:22:27] 2025-11-20 09:21:21,357 | INFO     | did not find any defunct processes belonging to 1814792
[2025-11-20 04:22:27] 2025-11-20 09:21:21,358 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 04:22:27] 2025-11-20 09:21:21,358 | INFO     | ready for new job
[2025-11-20 04:22:27] 2025-11-20 09:21:21,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 04:22:27] 2025-11-20 09:21:21,361 | INFO     | ***************************************
[2025-11-20 04:22:27] 2025-11-20 09:21:21,361 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 04:22:27] 2025-11-20 09:21:21,361 | INFO     | ***************************************
[2025-11-20 04:22:27] 2025-11-20 09:21:21,361 | INFO     | 
[2025-11-20 04:22:27] 2025-11-20 09:21:21,366 | INFO     | architecture information:
[2025-11-20 04:22:27] 2025-11-20 09:21:21,366 | INFO     | executing command: cat /etc/os-release
[2025-11-20 04:22:27] 2025-11-20 09:21:21,389 | INFO     | cat /etc/os-release:
[2025-11-20 04:22:27] NAME="CentOS Linux"
[2025-11-20 04:22:27] VERSION="7 (Core)"
[2025-11-20 04:22:27] ID="centos"
[2025-11-20 04:22:27] ID_LIKE="rhel fedora"
[2025-11-20 04:22:27] VERSION_ID="7"
[2025-11-20 04:22:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 04:22:27] ANSI_COLOR="0;31"
[2025-11-20 04:22:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 04:22:27] HOME_URL="https://www.centos.org/"
[2025-11-20 04:22:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 04:22:27] 
[2025-11-20 04:22:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 04:22:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 04:22:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 04:22:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 04:22:27] 
[2025-11-20 04:22:27] 2025-11-20 09:21:21,389 | INFO     | ***************************************
[2025-11-20 04:22:27] 2025-11-20 09:21:21,908 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-20 04:22:27] 2025-11-20 09:21:21,959 | INFO     | sufficient remaining disk space (67698163712 B)
[2025-11-20 04:22:27] 2025-11-20 09:21:21,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 04:22:27] 2025-11-20 09:21:21,959 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 04:22:27] 2025-11-20 09:21:21,959 | INFO     | update_server=False
[2025-11-20 04:22:27] 2025-11-20 09:21:21,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 04:22:27] 2025-11-20 09:21:22,106 | INFO     | all data control threads have been joined
[2025-11-20 04:22:27] 2025-11-20 09:21:22,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 04:22:27] 2025-11-20 09:21:22,139 | INFO     | aborting loop
[2025-11-20 04:22:27] 2025-11-20 09:21:22,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 04:22:27] 2025-11-20 09:21:22,965 | INFO     | [job] retrieve thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:22,997 | INFO     | all payload control threads have been joined
[2025-11-20 04:22:27] 2025-11-20 09:21:23,097 | INFO     | all job control threads have been joined
[2025-11-20 04:22:27] 2025-11-20 09:21:23,111 | INFO     | [data] control thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:23,144 | INFO     | [job] job monitor thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:23,249 | INFO     | [job] validate thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:23,518 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:23,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 04:22:27] 2025-11-20 09:21:23,663 | INFO     | [payload] failed_post thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:23,811 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:23,949 | INFO     | [data] copytool_in thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:23,976 | INFO     | [payload] validate_post thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:24,003 | INFO     | [payload] control thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:24,103 | INFO     | [job] control thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:24,219 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:24,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:24,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 04:22:27] 2025-11-20 09:21:24,456 | INFO     | [data] copytool_out thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:25,290 | INFO     | [job] queue monitor thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:27,569 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 04:22:27] 2025-11-20 09:21:51,248 | INFO     | PID=1755439 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 04:22:27] 2025-11-20 09:21:51,248 | INFO     | .. there are 57 such processes running
[2025-11-20 04:22:27] 2025-11-20 09:21:51,249 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 04:22:27] 2025-11-20 09:21:51,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 04:22:27] 2025-11-20 09:21:51,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 04:22:27] 2025-11-20 09:22:00,822 | INFO     | [monitor] cgroup control has ended
[2025-11-20 04:22:27] 2025-11-20 09:22:01,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020771616576)>', '<ExcThread(monitor, started 140020128134912)>']
[2025-11-20 04:22:27] 2025-11-20 09:22:02,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 04:22:27] 2025-11-20 09:22:02,321 | INFO     | [monitor] control thread has ended
[2025-11-20 04:22:27] 2025-11-20 09:22:06,598 | INFO     | all workflow threads have been joined
[2025-11-20 04:22:27] 2025-11-20 09:22:06,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 04:22:27] 2025-11-20 09:22:06,599 | INFO     | traces error code: 0
[2025-11-20 04:22:27] 2025-11-20 09:22:06,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 04:22:27] 2025-11-20 09:22:06,742 [wrapper] ==== pilot stdout END ====
[2025-11-20 04:22:27] 2025-11-20 09:22:06,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 04:22:27] 2025-11-20 09:22:06,759 [wrapper] pilotpid: 1755439
[2025-11-20 04:22:27] 2025-11-20 09:22:06,761 [wrapper] Pilot exit status: 0
[2025-11-20 04:22:27] 2025-11-20 09:22:06,805 [wrapper] pandaids: 6891550275 6891550275 6891550275
[2025-11-20 04:22:27] 2025-11-20 09:22:06,985 [wrapper] cleanup supervisor_pilot 2533783 1755440
[2025-11-20 04:22:27] 2025-11-20 09:22:06,993 [wrapper] Test setup, not cleaning
[2025-11-20 04:22:27] 2025-11-20 09:22:07,022 [wrapper] apfmon messages muted
[2025-11-20 04:22:27] 2025-11-20 09:22:07,026 [wrapper] ==== wrapper stdout END ====
[2025-11-20 04:22:27] 2025-11-20 09:22:07,033 [wrapper] ==== wrapper stderr END ====
[2025-11-20 04:22:27]  *** Error codes and diagnostics ***
[2025-11-20 04:22:27]     "exeErrorCode": 0,
[2025-11-20 04:22:27]     "exeErrorDiag": "",
[2025-11-20 04:22:27]     "pilotErrorCode": 0,
[2025-11-20 04:22:27]     "pilotErrorDiag": "",
[2025-11-20 04:22:27]  *** Listing of results directory ***
[2025-11-20 04:22:27] total 1721468
[2025-11-20 04:22:27] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 09:12 pilot3.tar.gz
[2025-11-20 04:22:27] -rwx------. 1 boincer umatlas     36292 Nov 18 10:14 runpilot2-wrapper.sh
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:14 queuedata.json
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas       100 Nov 18 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 04:22:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 18 22:04 run_atlas
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas       105 Nov 18 22:04 job.xml
[2025-11-20 04:22:27] -rw-r--r--. 3 boincer umatlas 409163993 Nov 18 22:05 EVNT.47493065._000011.pool.root.1
[2025-11-20 04:22:27] -rw-r--r--. 3 boincer umatlas 409163993 Nov 18 22:05 ATLAS.root_0
[2025-11-20 04:22:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 18 22:05 shared
[2025-11-20 04:22:27] -rw-r--r--. 2 boincer umatlas    590096 Nov 18 22:05 input.tar.gz
[2025-11-20 04:22:27] -rw-r--r--. 2 boincer umatlas     15120 Nov 18 22:05 start_atlas.sh
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas         0 Nov 18 22:05 boinc_lockfile
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas      2771 Nov 19 15:49 pandaJob.out
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas    989443 Nov 19 15:49 agis_schedconf.cvmfs.json
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas       534 Nov 20 04:07 boinc_task_state.xml
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas 924846714 Nov 20 04:20 HITS.47493068._000108.pool.root.1
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas      1060 Nov 20 04:20 memory_monitor_summary.json
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas   1525063 Nov 20 04:20 agis_ddmendpoints.agis.ALL.json
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas   2343466 Nov 20 04:20 log.47493068._000108.job.log.tgz.1
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas      8599 Nov 20 04:21 heartbeat.json
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas      7173 Nov 20 04:21 init_data.xml
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas        96 Nov 20 04:21 pilot_heartbeat.json
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas      4824 Nov 20 04:22 pilotlog.txt
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas   5494758 Nov 20 04:22 log.47493068._000108.job.log.1
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas       353 Nov 20 04:22 output.list
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas       620 Nov 20 04:22 runtime_log
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas   7854080 Nov 20 04:22 result.tar.gz
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas      8786 Nov 20 04:22 runtime_log.err
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas       913 Nov 20 04:22 FbtNDmTacf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5DFKDm2er0Ym.diag
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas        29 Nov 20 04:22 wrapper_checkpoint.txt
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 04:22 boinc_mmap_file
[2025-11-20 04:22:27] -rw-r--r--. 1 boincer umatlas     25803 Nov 20 04:22 stderr.txt
[2025-11-20 04:22:27] HITS file was successfully produced:
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas 924846714 Nov 20 04:20 shared/HITS.pool.root.1
[2025-11-20 04:22:27]  *** Contents of shared directory: ***
[2025-11-20 04:22:27] total 1311024
[2025-11-20 04:22:27] -rw-r--r--. 3 boincer umatlas 409163993 Nov 18 22:05 ATLAS.root_0
[2025-11-20 04:22:27] -rw-r--r--. 2 boincer umatlas    590096 Nov 18 22:05 input.tar.gz
[2025-11-20 04:22:27] -rw-r--r--. 2 boincer umatlas     15120 Nov 18 22:05 start_atlas.sh
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas 924846714 Nov 20 04:20 HITS.pool.root.1
[2025-11-20 04:22:27] -rw-------. 1 boincer umatlas   7854080 Nov 20 04:22 result.tar.gz
04:22:29 (1724892): run_atlas exited; CPU time 144094.208097
04:22:29 (1724892): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN