Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:05:38 (1155730): wrapper (7.7.26015): starting
12:05:38 (1155730): wrapper: running run_atlas (--nthreads 12)
[2025-11-18 12:05:38] Arguments: --nthreads 12
[2025-11-18 12:05:38] Threads: 12
[2025-11-18 12:05:38] Checking for CVMFS
[2025-11-18 12:05:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 12:05:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 12:05:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 12:05:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 12:05:40] 2.11.5.0 2885516 17274 275124 153012 3 573 38461881 45568000 13650 130560 0 155612782 99.742 114881952 10733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-18 12:05:40] CVMFS is ok
[2025-11-18 12:05:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 12:05:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 12:05:40] Further information can be found at the LHC@home message board.
[2025-11-18 12:05:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 12:05:40] Checking for apptainer binary...
[2025-11-18 12:05:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 12:05:40] Running /usr/bin/apptainer --version
[2025-11-18 12:05:41] apptainer version 1.4.1-1.el9
[2025-11-18 12:05:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 12:05:41] wns0089.triumf.lcg
[2025-11-18 12:05:41] apptainer works
[2025-11-18 12:05:41] Set ATHENA_PROC_NUMBER=12
[2025-11-18 12:05:41] Set ATHENA_CORE_NUMBER=12
[2025-11-18 12:05:41] Starting ATLAS job with PandaID=6891591365
[2025-11-18 12:05:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-18 12:10:37]  *** The last 200 lines of the pilot log: ***
[2025-11-18 12:10:37] 2025-11-18 20:10:02,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | WARNING  | wrong length of table data, x=[1763496412.0], y=[2012.0] (must be same and length>=4)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | INFO     | ..............................
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . Timing measurements:
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . get job = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . initial setup = 3 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . payload setup = 9 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . stage-in = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . payload execution = 65 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . stage-out = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . log creation = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | ..............................
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891591365/pilotlog.txt
[2025-11-18 12:10:37] 2025-11-18 20:10:03,143 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-18 12:10:37] - Log from pilotlog.txt -
[2025-11-18 12:10:37] 2025-11-18 20:10:02,897 | INFO     | extracted standard info from prmon json
[2025-11-18 12:10:37] 2025-11-18 20:10:02,938 | INFO     | time since job start (230s) is within the limit (172800.0s)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,897 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 12:10:37] 2025-11-18 20:10:02,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 12:10:37] 2025-11-18 20:10:02,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 12:10:37] 2025-11-18 20:10:02,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | WARNING  | wrong length of table data, x=[1763496412.0], y=[2012.0] (must be same and length>=4)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | INFO     | ..............................
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . Timing measurements:
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . get job = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . initial setup = 3 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . payload setup = 9 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . stage-in = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . payload execution = 65 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . stage-out = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . log creation = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | ..............................
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891591365/pilotlog.txt
[2025-11-18 12:10:37] 2025-11-18 20:10:03,144 | WARNING  | 
[2025-11-18 12:10:37] [begin log extracts]
[2025-11-18 12:10:37] - Log from pilotlog.txt -
[2025-11-18 12:10:37] 2025-11-18 20:10:02,897 | INFO     | extracted standard info from prmon json
[2025-11-18 12:10:37] 2025-11-18 20:10:02,938 | INFO     | time since job start (230s) is within the limit (172800.0s)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,897 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 12:10:37] 2025-11-18 20:10:02,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 12:10:37] 2025-11-18 20:10:02,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 12:10:37] 2025-11-18 20:10:02,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | WARNING  | wrong length of table data, x=[1763496412.0], y=[2012.0] (must be same and length>=4)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-11-18 12:10:37] 2025-11-18 20:10:02,951 | INFO     | ..............................
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . Timing measurements:
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . get job = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . initial setup = 3 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . payload setup = 9 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . stage-in = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . payload execution = 65 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . stage-out = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | . log creation = 0 s
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | ..............................
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 12:10:37] 2025-11-18 20:10:02,952 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891591365/pilotlog.txt
[2025-11-18 12:10:37] [end log extracts]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,144 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-18 12:10:37] 2025-11-18 20:10:03,145 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-18 12:10:37] 2025-11-18 20:10:03,453 | INFO     | 
[2025-11-18 12:10:37] 2025-11-18 20:10:03,453 | INFO     | job summary report
[2025-11-18 12:10:37] 2025-11-18 20:10:03,453 | INFO     | --------------------------------------------------
[2025-11-18 12:10:37] 2025-11-18 20:10:03,453 | INFO     | PanDA job id: 6891591365
[2025-11-18 12:10:37] 2025-11-18 20:10:03,453 | INFO     | task id: 47493068
[2025-11-18 12:10:37] 2025-11-18 20:10:03,453 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-18 12:07:44,377 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | pilot state: failed 
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | transexitcode: 65
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | exeerrorcode: 65
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | exitcode: 65
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | cpuconsumptiontime: 40 s
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | nevents: 0
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | neventsw: 0
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | pid: 1166003
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | pgrp: 1166003
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | corecount: 12
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | event service: False
[2025-11-18 12:10:37] 2025-11-18 20:10:03,454 | INFO     | sizes: {0: 2297026, 1: 2297225, 2: 2297225, 7: 2297515, 12: 2297543, 79: 2323085, 80: 2327375, 81: 2327403, 209: 2327569}
[2025-11-18 12:10:37] 2025-11-18 20:10:03,455 | INFO     | --------------------------------------------------
[2025-11-18 12:10:37] 2025-11-18 20:10:03,455 | INFO     | 
[2025-11-18 12:10:37] 2025-11-18 20:10:03,455 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-18 12:10:37] 2025-11-18 20:10:03,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-18 12:10:37] 2025-11-18 20:10:03,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-18 12:10:37] 2025-11-18 20:10:03,544 | INFO     | job 6891591365 has completed (purged errors)
[2025-11-18 12:10:37] 2025-11-18 20:10:03,544 | INFO     | overall cleanup function is called
[2025-11-18 12:10:37] 2025-11-18 20:10:04,609 | INFO     | --- collectZombieJob: --- 10, [1166003]
[2025-11-18 12:10:37] 2025-11-18 20:10:04,609 | INFO     | zombie collector waiting for pid 1166003
[2025-11-18 12:10:37] 2025-11-18 20:10:04,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-18 12:10:37] 2025-11-18 20:10:04,609 | INFO     | collected zombie processes
[2025-11-18 12:10:37] 2025-11-18 20:10:04,609 | INFO     | will attempt to kill all subprocesses of pid=1166003
[2025-11-18 12:10:37] 2025-11-18 20:10:04,781 | INFO     | process IDs to be killed: [1166003] (in reverse order)
[2025-11-18 12:10:37] 2025-11-18 20:10:04,840 | WARNING  | found no corresponding commands to process id(s)
[2025-11-18 12:10:37] 2025-11-18 20:10:04,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-18 12:10:37] 2025-11-18 20:10:04,847 | INFO     | did not find any defunct processes belonging to 1166003
[2025-11-18 12:10:37] 2025-11-18 20:10:04,853 | INFO     | did not find any defunct processes belonging to 1166003
[2025-11-18 12:10:37] 2025-11-18 20:10:04,854 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-18 12:10:37] 2025-11-18 20:10:04,854 | INFO     | ready for new job
[2025-11-18 12:10:37] 2025-11-18 20:10:04,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-18 12:10:37] 2025-11-18 20:10:04,856 | INFO     | ***************************************
[2025-11-18 12:10:37] 2025-11-18 20:10:04,856 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-18 12:10:37] 2025-11-18 20:10:04,856 | INFO     | ***************************************
[2025-11-18 12:10:37] 2025-11-18 20:10:04,856 | INFO     | 
[2025-11-18 12:10:37] 2025-11-18 20:10:04,858 | INFO     | architecture information:
[2025-11-18 12:10:37] 2025-11-18 20:10:04,858 | INFO     | executing command: cat /etc/os-release
[2025-11-18 12:10:37] 2025-11-18 20:10:04,871 | INFO     | cat /etc/os-release:
[2025-11-18 12:10:37] NAME="CentOS Linux"
[2025-11-18 12:10:37] VERSION="7 (Core)"
[2025-11-18 12:10:37] ID="centos"
[2025-11-18 12:10:37] ID_LIKE="rhel fedora"
[2025-11-18 12:10:37] VERSION_ID="7"
[2025-11-18 12:10:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-18 12:10:37] ANSI_COLOR="0;31"
[2025-11-18 12:10:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-18 12:10:37] HOME_URL="https://www.centos.org/"
[2025-11-18 12:10:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-18 12:10:37] 
[2025-11-18 12:10:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-18 12:10:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-18 12:10:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-18 12:10:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-18 12:10:37] 
[2025-11-18 12:10:37] 2025-11-18 20:10:04,872 | INFO     | ***************************************
[2025-11-18 12:10:37] 2025-11-18 20:10:05,375 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-18 12:10:37] 2025-11-18 20:10:05,406 | INFO     | sufficient remaining disk space (2077397876736 B)
[2025-11-18 12:10:37] 2025-11-18 20:10:05,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-18 12:10:37] 2025-11-18 20:10:05,407 | INFO     | current server update state: UPDATING_FINAL
[2025-11-18 12:10:37] 2025-11-18 20:10:05,407 | INFO     | update_server=False
[2025-11-18 12:10:37] 2025-11-18 20:10:05,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-18 12:10:37] 2025-11-18 20:10:05,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-18 12:10:37] 2025-11-18 20:10:05,563 | INFO     | all payload control threads have been joined
[2025-11-18 12:10:37] 2025-11-18 20:10:05,866 | INFO     | all job control threads have been joined
[2025-11-18 12:10:37] 2025-11-18 20:10:05,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-18 12:10:37] 2025-11-18 20:10:05,960 | INFO     | aborting loop
[2025-11-18 12:10:37] 2025-11-18 20:10:06,153 | INFO     | all data control threads have been joined
[2025-11-18 12:10:37] 2025-11-18 20:10:06,413 | INFO     | [job] retrieve thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,489 | INFO     | [payload] validate_post thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,494 | INFO     | [job] create_data_payload thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,569 | INFO     | [payload] control thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,753 | INFO     | [payload] validate_pre thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,872 | INFO     | [job] control thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,966 | INFO     | [job] job monitor thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:06,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-18 12:10:37] 2025-11-18 20:10:07,159 | INFO     | [data] control thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:07,449 | INFO     | [data] copytool_in thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:07,505 | INFO     | [data] copytool_out thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:07,510 | INFO     | [payload] failed_post thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:07,765 | INFO     | [job] validate thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:07,831 | INFO     | [payload] execute_payloads thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:08,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-18 12:10:37] 2025-11-18 20:10:09,313 | INFO     | [job] queue monitor thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:11,001 | INFO     | [data] queue_monitor thread has finished
[2025-11-18 12:10:37] 2025-11-18 20:10:12,539 | INFO     | [monitor] cgroup control has ended
[2025-11-18 12:10:37] 2025-11-18 20:10:12,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302061385536)>', '<ExcThread(monitor, started 140301507208960)>']
[2025-11-18 12:10:37] 2025-11-18 20:10:17,864 | INFO     | all workflow threads have been joined
[2025-11-18 12:10:37] 2025-11-18 20:10:17,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-18 12:10:37] 2025-11-18 20:10:17,864 | INFO     | traces error code: 0
[2025-11-18 12:10:37] 2025-11-18 20:10:17,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-18 12:10:37] 2025-11-18 20:10:36,294 | INFO     | PID=1159406 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-18 12:10:37] 2025-11-18 20:10:36,294 | INFO     | .. there are 21 such processes running
[2025-11-18 12:10:37] 2025-11-18 20:10:36,295 | INFO     | found 0 job(s) in 20 queues
[2025-11-18 12:10:37] 2025-11-18 20:10:36,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-18 12:10:37] 2025-11-18 20:10:36,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-18 12:10:37] 2025-11-18 20:10:36,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-18 12:10:37] 2025-11-18 20:10:36,295 | INFO     | [monitor] control thread has ended
[2025-11-18 12:10:37] 2025-11-18 20:10:36,398 [wrapper] ==== pilot stdout END ====
[2025-11-18 12:10:37] 2025-11-18 20:10:36,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-18 12:10:37] 2025-11-18 20:10:36,409 [wrapper] pilotpid: 1159406
[2025-11-18 12:10:37] 2025-11-18 20:10:36,411 [wrapper] Pilot exit status: 0
[2025-11-18 12:10:37] 2025-11-18 20:10:36,448 [wrapper] pandaids: 6891591365
[2025-11-18 12:10:37] 2025-11-18 20:10:36,558 [wrapper] cleanup supervisor_pilot 1159412 1159407
[2025-11-18 12:10:37] 2025-11-18 20:10:36,560 [wrapper] Test setup, not cleaning
[2025-11-18 12:10:37] 2025-11-18 20:10:36,573 [wrapper] apfmon messages muted
[2025-11-18 12:10:37] 2025-11-18 20:10:36,615 [wrapper] ==== wrapper stdout END ====
[2025-11-18 12:10:37] 2025-11-18 20:10:36,628 [wrapper] ==== wrapper stderr END ====
[2025-11-18 12:10:37]  *** Error codes and diagnostics ***
[2025-11-18 12:10:37]     "exeErrorCode": 65,
[2025-11-18 12:10:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-18 12:10:37]     "pilotErrorCode": 1305,
[2025-11-18 12:10:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-18 12:10:37]  *** Listing of results directory ***
[2025-11-18 12:10:37] total 405048
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc    576529 Nov 18 09:59 pilot3.tar.gz
[2025-11-18 12:10:37] -rwx------. 1 boinc boinc     36292 Nov 18 10:13 runpilot2-wrapper.sh
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc      5112 Nov 18 10:13 queuedata.json
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc       100 Nov 18 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-18 12:10:37] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 12:05 run_atlas
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc       105 Nov 18 12:05 job.xml
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc      6595 Nov 18 12:05 init_data.xml
[2025-11-18 12:10:37] -rw-r--r--. 2 boinc boinc 410568695 Nov 18 12:05 EVNT.47493065._000620.pool.root.1
[2025-11-18 12:10:37] -rw-r--r--. 2 boinc boinc     15120 Nov 18 12:05 start_atlas.sh
[2025-11-18 12:10:37] drwxrwx--x. 2 boinc boinc      4096 Nov 18 12:05 shared
[2025-11-18 12:10:37] -rw-r--r--. 2 boinc boinc    590096 Nov 18 12:05 input.tar.gz
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc         0 Nov 18 12:05 boinc_lockfile
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc      2773 Nov 18 12:05 pandaJob.out
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc    992790 Nov 18 12:06 agis_schedconf.cvmfs.json
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc   1525063 Nov 18 12:06 agis_ddmendpoints.agis.ALL.json
[2025-11-18 12:10:37] drwx------. 5 boinc boinc      4096 Nov 18 12:06 pilot3
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc       524 Nov 18 12:07 boinc_task_state.xml
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc       949 Nov 18 12:07 memory_monitor_summary.json
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc     48992 Nov 18 12:07 log.47493068._005698.job.log.tgz.1
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc     10327 Nov 18 12:10 heartbeat.json
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc      8192 Nov 18 12:10 boinc_mmap_file
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc        23 Nov 18 12:10 wrapper_checkpoint.txt
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc        95 Nov 18 12:10 pilot_heartbeat.json
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc       823 Nov 18 12:10 pilotlog.txt
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc     96296 Nov 18 12:10 log.47493068._005698.job.log.1
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc       186 Nov 18 12:10 output.list
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc       620 Nov 18 12:10 runtime_log
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc    163840 Nov 18 12:10 result.tar.gz
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc       644 Nov 18 12:10 YWGODm6Nff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdCGKDm9JCpSm.diag
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc      8528 Nov 18 12:10 runtime_log.err
[2025-11-18 12:10:37] -rw-r--r--. 1 boinc boinc     16467 Nov 18 12:10 stderr.txt
[2025-11-18 12:10:37] No HITS result produced
[2025-11-18 12:10:37]  *** Contents of shared directory: ***
[2025-11-18 12:10:37] total 401708
[2025-11-18 12:10:37] -rw-r--r--. 2 boinc boinc 410568695 Nov 18 12:05 ATLAS.root_0
[2025-11-18 12:10:37] -rw-r--r--. 2 boinc boinc     15120 Nov 18 12:05 start_atlas.sh
[2025-11-18 12:10:37] -rw-r--r--. 2 boinc boinc    590096 Nov 18 12:05 input.tar.gz
[2025-11-18 12:10:37] -rw-------. 1 boinc boinc    163840 Nov 18 12:10 result.tar.gz
12:10:39 (1155730): run_atlas exited; CPU time 42.123136
12:10:39 (1155730): called boinc_finish(0)

</stderr_txt>
]]>

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