Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:52:57 (3726): wrapper (7.7.26015): starting
21:52:57 (3726): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 21:52:58] Arguments: --nthreads 8
[2025-11-19 21:52:58] Threads: 8
[2025-11-19 21:52:58] Checking for CVMFS
[2025-11-19 21:52:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 21:52:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 21:52:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 21:53:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 21:53:00] 2.11.2.0 20636 275814 142108 153056 0 187 22576887 25165824 4632 130560 2 120986264 99.886 69574076 2945 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 21:53:00] CVMFS is ok
[2025-11-19 21:53:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 21:53:00] Checking for apptainer binary...
[2025-11-19 21:53:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 21:53:00] Running /usr/bin/apptainer --version
[2025-11-19 21:53:02] apptainer version 1.3.2-1.el7
[2025-11-19 21:53:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 21:53:09] cg-vwn312.simple-grid.lan
[2025-11-19 21:53:09] apptainer works
[2025-11-19 21:53:09] Set ATHENA_PROC_NUMBER=8
[2025-11-19 21:53:09] Set ATHENA_CORE_NUMBER=8
[2025-11-19 21:53:09] Starting ATLAS job with PandaID=6891591845
[2025-11-19 21:53:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:11:44]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:11:44] 2025-11-20 22:10:55,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:11:44] 2025-11-20 22:10:56,344 | INFO     | time since job start (90839s) is within the limit (172800.0s)
[2025-11-20 23:11:44] 2025-11-20 22:10:58,144 | INFO     | monitor loop #6108: job 0:6891591845 is in state 'finished'
[2025-11-20 23:11:44] 2025-11-20 22:10:58,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:11:44] 2025-11-20 22:10:58,351 | INFO     | time since job start (90841s) is within the limit (172800.0s)
[2025-11-20 23:11:44] 2025-11-20 22:11:00,361 | INFO     | time since job start (90843s) is within the limit (172800.0s)
[2025-11-20 23:11:44] 2025-11-20 22:11:00,651 | INFO     | monitor loop #6109: job 0:6891591845 is in state 'finished'
[2025-11-20 23:11:44] 2025-11-20 22:11:00,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:11:44] 2025-11-20 22:11:02,368 | INFO     | time since job start (90845s) is within the limit (172800.0s)
[2025-11-20 23:11:44] 2025-11-20 22:11:03,156 | INFO     | monitor loop #6110: job 0:6891591845 is in state 'finished'
[2025-11-20 23:11:44] 2025-11-20 22:11:03,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:11:44] 2025-11-20 22:11:04,383 | INFO     | time since job start (90847s) is within the limit (172800.0s)
[2025-11-20 23:11:44] 2025-11-20 22:11:05,666 | INFO     | monitor loop #6111: job 0:6891591845 is in state 'finished'
[2025-11-20 23:11:44] 2025-11-20 22:11:05,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:11:44] 2025-11-20 22:11:06,391 | INFO     | time since job start (90849s) is within the limit (172800.0s)
[2025-11-20 23:11:44] 2025-11-20 22:11:07,479 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 23:11:44] 2025-11-20 22:11:07,480 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 23:11:44] 2025-11-20 22:11:07,482 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6891591845/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:11:44] 2025-11-20 22:11:07,482 | INFO     | extracted standard info from prmon json
[2025-11-20 23:11:44] 2025-11-20 22:11:07,482 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:11:44] 2025-11-20 22:11:07,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:11:44] 2025-11-20 22:11:07,522 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:11:44] 2025-11-20 22:11:07,525 | INFO     | sum of square deviations: 1003190096235.9103
[2025-11-20 23:11:44] 2025-11-20 22:11:07,592 | INFO     | sum of deviations: 5081480918506.989
[2025-11-20 23:11:44] 2025-11-20 22:11:07,592 | INFO     | mean x: 1763631441.2129817
[2025-11-20 23:11:44] 2025-11-20 22:11:07,592 | INFO     | mean y: 2854577.7714672075
[2025-11-20 23:11:44] 2025-11-20 22:11:07,592 | INFO     | intersect: -8930506655.985447
[2025-11-20 23:11:44] 2025-11-20 22:11:07,594 | INFO     | chi2: 18.81326804325449
[2025-11-20 23:11:44] 2025-11-20 22:11:07,596 | INFO     | sum of square deviations: 993050667231.0297
[2025-11-20 23:11:44] 2025-11-20 22:11:07,664 | INFO     | sum of deviations: 5567773202059.576
[2025-11-20 23:11:44] 2025-11-20 22:11:07,664 | INFO     | mean x: 1763631288.7170963
[2025-11-20 23:11:44] 2025-11-20 22:11:07,664 | INFO     | mean y: 2861890.6512890095
[2025-11-20 23:11:44] 2025-11-20 22:11:07,665 | INFO     | intersect: -9885353637.175724
[2025-11-20 23:11:44] 2025-11-20 22:11:07,666 | INFO     | chi2: 15.802946140730459
[2025-11-20 23:11:44] 2025-11-20 22:11:07,667 | INFO     | current chi2=15.802946140730459 (change=16.001057847062267 %)
[2025-11-20 23:11:44] 2025-11-20 22:11:07,667 | INFO     | right removable region: 1473
[2025-11-20 23:11:44] 2025-11-20 22:11:07,669 | INFO     | sum of square deviations: 993049572891.0288
[2025-11-20 23:11:44] 2025-11-20 22:11:07,731 | INFO     | sum of deviations: 4470248916912.108
[2025-11-20 23:11:44] 2025-11-20 22:11:07,732 | INFO     | mean x: 1763631593.7170963
[2025-11-20 23:11:44] 2025-11-20 22:11:07,732 | INFO     | mean y: 2863769.3887381274
[2025-11-20 23:11:44] 2025-11-20 22:11:07,732 | INFO     | intersect: -7936188254.6646
[2025-11-20 23:11:44] 2025-11-20 22:11:07,734 | INFO     | chi2: 14.167978786557324
[2025-11-20 23:11:44] 2025-11-20 22:11:07,734 | INFO     | current chi2=14.167978786557324 (change=24.69155941443537 %)
[2025-11-20 23:11:44] 2025-11-20 22:11:07,734 | INFO     | left removable region: 10
[2025-11-20 23:11:44] 2025-11-20 22:11:07,736 | INFO     | sum of square deviations: 970982736468.1125
[2025-11-20 23:11:44] 2025-11-20 22:11:07,799 | INFO     | sum of deviations: 4522967823298.871
[2025-11-20 23:11:44] 2025-11-20 22:11:07,799 | INFO     | mean x: 1763631563.2262475
[2025-11-20 23:11:44] 2025-11-20 22:11:07,799 | INFO     | mean y: 2881247.946001367
[2025-11-20 23:11:44] 2025-11-20 22:11:07,800 | INFO     | intersect: -8212351127.494455
[2025-11-20 23:11:44] 2025-11-20 22:11:07,802 | INFO     | chi2: 6.680193561847515
[2025-11-20 23:11:44] 2025-11-20 22:11:07,802 | INFO     | current memory leak: 4.66 B/s (using 1463 data points, chi2=6.68)
[2025-11-20 23:11:44] 2025-11-20 22:11:07,805 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 23:11:44] 2025-11-20 22:11:07,805 | INFO     | ..............................
[2025-11-20 23:11:44] 2025-11-20 22:11:07,805 | INFO     | . Timing measurements:
[2025-11-20 23:11:44] 2025-11-20 22:11:07,805 | INFO     | . get job = 0 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,805 | INFO     | . initial setup = 12 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,805 | INFO     | . payload setup = 168 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,806 | INFO     | . stage-in = 0 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,806 | INFO     | . payload execution = 90349 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,806 | INFO     | . stage-out = 7 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,806 | INFO     | . log creation = 2 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,806 | INFO     | ..............................
[2025-11-20 23:11:44] 2025-11-20 22:11:07,943 | INFO     | 
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | job summary report
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | --------------------------------------------------
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | PanDA job id: 6891591845
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | task id: 47493068
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | errors: (none)
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | pilot state: finished 
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | transexitcode: 0
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | exeerrorcode: 0
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | exeerrordiag: 
[2025-11-20 23:11:44] 2025-11-20 22:11:07,944 | INFO     | exitcode: 0
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | exitmsg: OK
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | cpuconsumptiontime: 334897 s
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | nevents: 1000
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | neventsw: 0
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | pid: 14094
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | pgrp: 14094
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | corecount: 8
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | event service: False
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | sizes: {0: 2296321, 1: 2296922, 2: 2297034, 3: 2297205, 13: 2297233, 24: 2297289, 35: 2297445, 46: 2297473, 56: 2297501, 67: 2297529, 78: 2297557, 89: 2297893, 99:
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | --------------------------------------------------
[2025-11-20 23:11:44] 2025-11-20 22:11:07,945 | INFO     | 
[2025-11-20 23:11:44] 2025-11-20 22:11:07,946 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-20 23:11:44] 2025-11-20 22:11:08,400 | INFO     | time since job start (90851s) is within the limit (172800.0s)
[2025-11-20 23:11:44] 2025-11-20 22:11:08,431 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,433 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:11:44] 2025-11-20 22:11:08,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,433 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:11:44] 2025-11-20 22:11:08,433 | INFO     | job 6891591845 has completed (purged errors)
[2025-11-20 23:11:44] 2025-11-20 22:11:08,433 | INFO     | overall cleanup function is called
[2025-11-20 23:11:44] 2025-11-20 22:11:09,454 | INFO     | --- collectZombieJob: --- 10, [14094]
[2025-11-20 23:11:44] 2025-11-20 22:11:09,454 | INFO     | zombie collector waiting for pid 14094
[2025-11-20 23:11:44] 2025-11-20 22:11:09,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:11:44] 2025-11-20 22:11:09,455 | INFO     | collected zombie processes
[2025-11-20 23:11:44] 2025-11-20 22:11:09,455 | INFO     | will attempt to kill all subprocesses of pid=14094
[2025-11-20 23:11:44] 2025-11-20 22:11:09,605 | INFO     | process IDs to be killed: [14094] (in reverse order)
[2025-11-20 23:11:44] 2025-11-20 22:11:10,529 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:11:44] 2025-11-20 22:11:10,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:11:44] 2025-11-20 22:11:10,533 | INFO     | did not find any defunct processes belonging to 14094
[2025-11-20 23:11:44] 2025-11-20 22:11:10,537 | INFO     | did not find any defunct processes belonging to 14094
[2025-11-20 23:11:44] 2025-11-20 22:11:10,596 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:11:44] 2025-11-20 22:11:10,597 | INFO     | ready for new job
[2025-11-20 23:11:44] 2025-11-20 22:11:10,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:11:44] 2025-11-20 22:11:10,604 | INFO     | ***************************************
[2025-11-20 23:11:44] 2025-11-20 22:11:10,604 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:11:44] 2025-11-20 22:11:10,604 | INFO     | ***************************************
[2025-11-20 23:11:44] 2025-11-20 22:11:10,604 | INFO     | 
[2025-11-20 23:11:44] 2025-11-20 22:11:10,605 | INFO     | pilot is running in a VM
[2025-11-20 23:11:44] 2025-11-20 22:11:10,605 | INFO     | architecture information:
[2025-11-20 23:11:44] 2025-11-20 22:11:10,609 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:11:44] 2025-11-20 22:11:10,803 | INFO     | cat /etc/os-release:
[2025-11-20 23:11:44] NAME="CentOS Linux"
[2025-11-20 23:11:44] VERSION="7 (Core)"
[2025-11-20 23:11:44] ID="centos"
[2025-11-20 23:11:44] ID_LIKE="rhel fedora"
[2025-11-20 23:11:44] VERSION_ID="7"
[2025-11-20 23:11:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:11:44] ANSI_COLOR="0;31"
[2025-11-20 23:11:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:11:44] HOME_URL="https://www.centos.org/"
[2025-11-20 23:11:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:11:44] 
[2025-11-20 23:11:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:11:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:11:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:11:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:11:44] 
[2025-11-20 23:11:44] 2025-11-20 22:11:10,803 | INFO     | ***************************************
[2025-11-20 23:11:44] 2025-11-20 22:11:11,306 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-20 23:11:44] 2025-11-20 22:11:11,596 | INFO     | sufficient remaining disk space (494392049664 B)
[2025-11-20 23:11:44] 2025-11-20 22:11:11,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:11:44] 2025-11-20 22:11:11,596 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:11:44] 2025-11-20 22:11:11,596 | INFO     | update_server=False
[2025-11-20 23:11:44] 2025-11-20 22:11:11,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:11:44] 2025-11-20 22:11:11,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:11:44] 2025-11-20 22:11:11,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:11:44] 2025-11-20 22:11:11,691 | INFO     | aborting loop
[2025-11-20 23:11:44] 2025-11-20 22:11:11,804 | INFO     | all data control threads have been joined
[2025-11-20 23:11:44] 2025-11-20 22:11:11,874 | INFO     | all job control threads have been joined
[2025-11-20 23:11:44] 2025-11-20 22:11:12,268 | INFO     | all payload control threads have been joined
[2025-11-20 23:11:44] 2025-11-20 22:11:12,603 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:12,697 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:12,810 | INFO     | [data] control thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:12,880 | INFO     | [job] control thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:12,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:12,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:11:44] 2025-11-20 22:11:13,105 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,177 | INFO     | [job] validate thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,273 | INFO     | [payload] control thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,382 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,424 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,565 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,604 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,722 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:13,965 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:14,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:11:44] 2025-11-20 22:11:14,097 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:18,086 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:11:44] 2025-11-20 22:11:35,140 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:11:44] 2025-11-20 22:11:36,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247280686912)>', '<ExcThread(monitor, started 140246679267072)>']
[2025-11-20 23:11:44] 2025-11-20 22:11:41,606 | INFO     | PID=7510 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 23:11:44] 2025-11-20 22:11:41,607 | INFO     | .. there are 9 such processes running
[2025-11-20 23:11:44] 2025-11-20 22:11:41,608 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:11:44] 2025-11-20 22:11:41,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:11:44] 2025-11-20 22:11:41,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:11:44] 2025-11-20 22:11:41,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:11:44] 2025-11-20 22:11:41,609 | INFO     | [monitor] control thread has ended
[2025-11-20 23:11:44] 2025-11-20 22:11:42,022 | INFO     | all workflow threads have been joined
[2025-11-20 23:11:44] 2025-11-20 22:11:42,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:11:44] 2025-11-20 22:11:42,023 | INFO     | traces error code: 0
[2025-11-20 23:11:44] 2025-11-20 22:11:42,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:11:44] 2025-11-20 22:11:42,266 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:11:44] 2025-11-20 22:11:42,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:11:44] 2025-11-20 22:11:42,385 [wrapper] pilotpid: 7510
[2025-11-20 23:11:44] 2025-11-20 22:11:42,531 [wrapper] Pilot exit status: 0
[2025-11-20 23:11:44] 2025-11-20 22:11:42,704 [wrapper] pandaids: 6891591845
[2025-11-20 23:11:44] 2025-11-20 22:11:42,762 [wrapper] cleanup supervisor_pilot 18604 7511
[2025-11-20 23:11:44] 2025-11-20 22:11:42,780 [wrapper] Test setup, not cleaning
[2025-11-20 23:11:44] 2025-11-20 22:11:42,791 [wrapper] apfmon messages muted
[2025-11-20 23:11:44] 2025-11-20 22:11:42,797 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:11:44] 2025-11-20 22:11:42,807 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:11:44]  *** Error codes and diagnostics ***
[2025-11-20 23:11:44]     "exeErrorCode": 0,
[2025-11-20 23:11:44]     "exeErrorDiag": "",
[2025-11-20 23:11:44]     "pilotErrorCode": 0,
[2025-11-20 23:11:44]     "pilotErrorDiag": "",
[2025-11-20 23:11:44]  *** Listing of results directory ***
[2025-11-20 23:11:44] total 1321596
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc      5112 Nov 18 19:11 queuedata.json
[2025-11-20 23:11:44] -rwx------. 1 boinc boinc     36292 Nov 18 19:11 runpilot2-wrapper.sh
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc       100 Nov 19 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:11:44] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 21:52 run_atlas
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc       105 Nov 19 21:52 job.xml
[2025-11-20 23:11:44] -rw-r--r--. 2 boinc boinc 407585883 Nov 19 21:52 EVNT.47493065._000628.pool.root.1
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc      6389 Nov 19 21:52 init_data.xml
[2025-11-20 23:11:44] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:52 start_atlas.sh
[2025-11-20 23:11:44] drwxrwx--x. 2 boinc boinc        68 Nov 19 21:52 shared
[2025-11-20 23:11:44] -rw-r--r--. 2 boinc boinc    590092 Nov 19 21:52 input.tar.gz
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc         0 Nov 19 21:52 boinc_lockfile
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc      2772 Nov 19 21:53 pandaJob.out
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc    989443 Nov 19 21:56 agis_schedconf.cvmfs.json
[2025-11-20 23:11:44] drwx------. 5 boinc boinc      4096 Nov 19 21:56 pilot3
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc       533 Nov 20 22:55 boinc_task_state.xml
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc 912469879 Nov 20 23:07 HITS.47493068._005777.pool.root.1
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc      1031 Nov 20 23:09 memory_monitor_summary.json
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc   1526164 Nov 20 23:09 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc   2566588 Nov 20 23:09 log.47493068._005777.job.log.tgz.1
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc      8627 Nov 20 23:11 heartbeat.json
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc        29 Nov 20 23:11 wrapper_checkpoint.txt
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc        95 Nov 20 23:11 pilot_heartbeat.json
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc      4883 Nov 20 23:11 pilotlog.txt
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc  12104578 Nov 20 23:11 log.47493068._005777.job.log.1
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc       353 Nov 20 23:11 output.list
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc       620 Nov 20 23:11 runtime_log
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc  14694400 Nov 20 23:11 result.tar.gz
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc      8703 Nov 20 23:11 runtime_log.err
[2025-11-20 23:11:44] -rw-------. 1 boinc boinc       662 Nov 20 23:11 KDIODmSMff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVCGKDmmR6M3m.diag
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc      8192 Nov 20 23:11 boinc_mmap_file
[2025-11-20 23:11:44] -rw-r--r--. 1 boinc boinc     21439 Nov 20 23:11 stderr.txt
[2025-11-20 23:11:45] HITS file was successfully produced:
[2025-11-20 23:11:45] -rw-------. 1 boinc boinc 912469879 Nov 20 23:07 shared/HITS.pool.root.1
[2025-11-20 23:11:45]  *** Contents of shared directory: ***
[2025-11-20 23:11:45] total 1304068
[2025-11-20 23:11:45] -rw-r--r--. 2 boinc boinc 407585883 Nov 19 21:52 ATLAS.root_0
[2025-11-20 23:11:45] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:52 start_atlas.sh
[2025-11-20 23:11:45] -rw-r--r--. 2 boinc boinc    590092 Nov 19 21:52 input.tar.gz
[2025-11-20 23:11:45] -rw-------. 1 boinc boinc 912469879 Nov 20 23:07 HITS.pool.root.1
[2025-11-20 23:11:45] -rw-------. 1 boinc boinc  14694400 Nov 20 23:11 result.tar.gz
23:11:47 (3726): run_atlas exited; CPU time 335480.633110
23:11:47 (3726): called boinc_finish(0)

</stderr_txt>
]]>

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