Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:54:40 (11914): wrapper (7.7.26015): starting
21:54:40 (11914): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:54:40] Arguments: --nthreads 8
[2025-11-21 21:54:40] Threads: 8
[2025-11-21 21:54:40] Checking for CVMFS
[2025-11-21 21:54:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:54:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:54:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:54:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:54:41] 2.11.2.0 31978 278626 144808 153142 0 239 17483383 25165825 3670 130560 2 128827710 99.875 73240461 3011 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 21:54:41] CVMFS is ok
[2025-11-21 21:54:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:54:41] Checking for apptainer binary...
[2025-11-21 21:54:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:54:41] Running /usr/bin/apptainer --version
[2025-11-21 21:54:41] apptainer version 1.3.2-1.el7
[2025-11-21 21:54:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:54:43] cg-vwn266.simple-grid.lan
[2025-11-21 21:54:43] apptainer works
[2025-11-21 21:54:43] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:54:43] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:54:43] Starting ATLAS job with PandaID=6891571873
[2025-11-21 21:54:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:57:52]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:57:52] 2025-11-22 21:56:31,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:57:52] 2025-11-22 21:56:33,538 | INFO     | time since job start (90087s) is within the limit (172800.0s)
[2025-11-22 22:57:52] 2025-11-22 21:56:34,218 | INFO     | monitor loop #6004: job 0:6891571873 is in state 'finished'
[2025-11-22 22:57:52] 2025-11-22 21:56:34,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:57:52] 2025-11-22 21:56:35,544 | INFO     | time since job start (90089s) is within the limit (172800.0s)
[2025-11-22 22:57:52] 2025-11-22 21:56:36,723 | INFO     | monitor loop #6005: job 0:6891571873 is in state 'finished'
[2025-11-22 22:57:52] 2025-11-22 21:56:36,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:57:52] 2025-11-22 21:56:37,553 | INFO     | time since job start (90091s) is within the limit (172800.0s)
[2025-11-22 22:57:52] 2025-11-22 21:56:38,775 | INFO     | PID=15681 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:57:52] 2025-11-22 21:56:38,775 | INFO     | .. there are 9 such processes running
[2025-11-22 22:57:52] 2025-11-22 21:56:39,249 | INFO     | monitor loop #6006: job 0:6891571873 is in state 'finished'
[2025-11-22 22:57:52] 2025-11-22 21:56:39,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:57:52] 2025-11-22 21:56:39,782 | INFO     | time since job start (90093s) is within the limit (172800.0s)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,511 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 22:57:52] 2025-11-22 21:56:41,512 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 22:57:52] 2025-11-22 21:56:41,514 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6891571873/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,515 | INFO     | extracted standard info from prmon json
[2025-11-22 22:57:52] 2025-11-22 21:56:41,515 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:57:52] 2025-11-22 21:56:41,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:57:52] 2025-11-22 21:56:41,542 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:57:52] 2025-11-22 21:56:41,545 | INFO     | sum of square deviations: 993046309958.7844
[2025-11-22 22:57:52] 2025-11-22 21:56:41,607 | INFO     | sum of deviations: 2881403460373.0513
[2025-11-22 22:57:52] 2025-11-22 21:56:41,608 | INFO     | mean x: 1763803553.8229308
[2025-11-22 22:57:52] 2025-11-22 21:56:41,608 | INFO     | mean y: 2861508.394843962
[2025-11-22 22:57:52] 2025-11-22 21:56:41,608 | INFO     | intersect: -5114955870.75096
[2025-11-22 22:57:52] 2025-11-22 21:56:41,610 | INFO     | chi2: 14.117870291622879
[2025-11-22 22:57:52] 2025-11-22 21:56:41,612 | INFO     | sum of square deviations: 982975487957.5035
[2025-11-22 22:57:52] 2025-11-22 21:56:41,668 | INFO     | sum of deviations: 3366356830559.189
[2025-11-22 22:57:52] 2025-11-22 21:56:41,668 | INFO     | mean x: 1763803401.3274336
[2025-11-22 22:57:52] 2025-11-22 21:56:41,668 | INFO     | mean y: 2868850.637848877
[2025-11-22 22:57:52] 2025-11-22 21:56:41,668 | INFO     | intersect: -6037558098.522081
[2025-11-22 22:57:52] 2025-11-22 21:56:41,670 | INFO     | chi2: 10.980346612590804
[2025-11-22 22:57:52] 2025-11-22 21:56:41,670 | INFO     | current chi2=10.980346612590804 (change=22.2237746503011 %)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,670 | INFO     | right removable region: 1468
[2025-11-22 22:57:52] 2025-11-22 21:56:41,673 | INFO     | sum of square deviations: 982974298457.5042
[2025-11-22 22:57:52] 2025-11-22 21:56:41,733 | INFO     | sum of deviations: 2381585374983.822
[2025-11-22 22:57:52] 2025-11-22 21:56:41,733 | INFO     | mean x: 1763803706.3274336
[2025-11-22 22:57:52] 2025-11-22 21:56:41,733 | INFO     | mean y: 2869073.82573179
[2025-11-22 22:57:52] 2025-11-22 21:56:41,734 | INFO     | intersect: -4270537787.2930055
[2025-11-22 22:57:52] 2025-11-22 21:56:41,735 | INFO     | chi2: 11.13472578444261
[2025-11-22 22:57:52] 2025-11-22 21:56:41,736 | INFO     | current chi2=11.13472578444261 (change=21.13027280715546 %)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,736 | INFO     | left removable region: 10
[2025-11-22 22:57:52] 2025-11-22 21:56:41,738 | INFO     | sum of square deviations: 961057840397.1653
[2025-11-22 22:57:52] 2025-11-22 21:56:41,769 | INFO     | monitor loop #6007: job 0:6891571873 is in state 'finished'
[2025-11-22 22:57:52] 2025-11-22 21:56:41,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,788 | INFO     | time since job start (90095s) is within the limit (172800.0s)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,815 | INFO     | sum of deviations: 2809582911315.103
[2025-11-22 22:57:52] 2025-11-22 21:56:41,816 | INFO     | mean x: 1763803675.834705
[2025-11-22 22:57:52] 2025-11-22 21:56:41,816 | INFO     | mean y: 2880613.1165980794
[2025-11-22 22:57:52] 2025-11-22 21:56:41,816 | INFO     | intersect: -5153471542.016986
[2025-11-22 22:57:52] 2025-11-22 21:56:41,817 | INFO     | chi2: 6.924337105605477
[2025-11-22 22:57:52] 2025-11-22 21:56:41,818 | INFO     | current memory leak: 2.92 B/s (using 1458 data points, chi2=6.92)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,820 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,820 | INFO     | ..............................
[2025-11-22 22:57:52] 2025-11-22 21:56:41,820 | INFO     | . Timing measurements:
[2025-11-22 22:57:52] 2025-11-22 21:56:41,820 | INFO     | . get job = 0 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,820 | INFO     | . initial setup = 2 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,821 | INFO     | . payload setup = 22 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,821 | INFO     | . stage-in = 0 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,821 | INFO     | . payload execution = 89914 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,821 | INFO     | . stage-out = 5 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,821 | INFO     | . log creation = 1 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,821 | INFO     | ..............................
[2025-11-22 22:57:52] 2025-11-22 21:56:41,969 | INFO     | 
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | job summary report
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | --------------------------------------------------
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | PanDA job id: 6891571873
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | task id: 47493068
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | errors: (none)
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | pilot state: finished 
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | transexitcode: 0
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | exeerrorcode: 0
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | exeerrordiag: 
[2025-11-22 22:57:52] 2025-11-22 21:56:41,970 | INFO     | exitcode: 0
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | exitmsg: OK
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | cpuconsumptiontime: 334149 s
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | nevents: 1000
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | neventsw: 0
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | pid: 30096
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | pgrp: 30096
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | corecount: 8
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | event service: False
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | sizes: {0: 2298624, 1: 2298823, 12: 2299113, 23: 2299113, 89941: 2362639, 89942: 2362638, 89948: 2371816, 89951: 2371872, 90042: 2372118}
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | --------------------------------------------------
[2025-11-22 22:57:52] 2025-11-22 21:56:41,971 | INFO     | 
[2025-11-22 22:57:52] 2025-11-22 21:56:41,972 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-22 22:57:52] 2025-11-22 21:56:42,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | job 6891571873 has completed (purged errors)
[2025-11-22 22:57:52] 2025-11-22 21:56:42,008 | INFO     | overall cleanup function is called
[2025-11-22 22:57:52] 2025-11-22 21:56:43,028 | INFO     | --- collectZombieJob: --- 10, [30096]
[2025-11-22 22:57:52] 2025-11-22 21:56:43,028 | INFO     | zombie collector waiting for pid 30096
[2025-11-22 22:57:52] 2025-11-22 21:56:43,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:57:52] 2025-11-22 21:56:43,029 | INFO     | collected zombie processes
[2025-11-22 22:57:52] 2025-11-22 21:56:43,029 | INFO     | will attempt to kill all subprocesses of pid=30096
[2025-11-22 22:57:52] 2025-11-22 21:56:43,167 | INFO     | process IDs to be killed: [30096] (in reverse order)
[2025-11-22 22:57:52] 2025-11-22 21:56:44,073 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:57:52] 2025-11-22 21:56:44,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:57:52] 2025-11-22 21:56:44,077 | INFO     | did not find any defunct processes belonging to 30096
[2025-11-22 22:57:52] 2025-11-22 21:56:44,081 | INFO     | did not find any defunct processes belonging to 30096
[2025-11-22 22:57:52] 2025-11-22 21:56:44,152 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:57:52] 2025-11-22 21:56:44,153 | INFO     | ready for new job
[2025-11-22 22:57:52] 2025-11-22 21:56:44,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:57:52] 2025-11-22 21:56:44,160 | INFO     | ***************************************
[2025-11-22 22:57:52] 2025-11-22 21:56:44,161 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:57:52] 2025-11-22 21:56:44,161 | INFO     | ***************************************
[2025-11-22 22:57:52] 2025-11-22 21:56:44,161 | INFO     | 
[2025-11-22 22:57:52] 2025-11-22 21:56:44,162 | INFO     | pilot is running in a VM
[2025-11-22 22:57:52] 2025-11-22 21:56:44,162 | INFO     | architecture information:
[2025-11-22 22:57:52] 2025-11-22 21:56:44,168 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:57:52] 2025-11-22 21:56:44,308 | INFO     | cat /etc/os-release:
[2025-11-22 22:57:52] NAME="CentOS Linux"
[2025-11-22 22:57:52] VERSION="7 (Core)"
[2025-11-22 22:57:52] ID="centos"
[2025-11-22 22:57:52] ID_LIKE="rhel fedora"
[2025-11-22 22:57:52] VERSION_ID="7"
[2025-11-22 22:57:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:57:52] ANSI_COLOR="0;31"
[2025-11-22 22:57:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:57:52] HOME_URL="https://www.centos.org/"
[2025-11-22 22:57:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:57:52] 
[2025-11-22 22:57:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:57:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:57:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:57:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:57:52] 
[2025-11-22 22:57:52] 2025-11-22 21:56:44,308 | INFO     | ***************************************
[2025-11-22 22:57:52] 2025-11-22 21:56:44,811 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-22 22:57:52] 2025-11-22 21:56:45,107 | INFO     | sufficient remaining disk space (493210304512 B)
[2025-11-22 22:57:52] 2025-11-22 21:56:45,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:57:52] 2025-11-22 21:56:45,107 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:57:52] 2025-11-22 21:56:45,107 | INFO     | update_server=False
[2025-11-22 22:57:52] 2025-11-22 21:56:45,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:57:52] 2025-11-22 21:56:45,226 | INFO     | all payload control threads have been joined
[2025-11-22 22:57:52] 2025-11-22 21:56:45,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:57:52] 2025-11-22 21:56:45,316 | INFO     | aborting loop
[2025-11-22 22:57:52] 2025-11-22 21:56:45,750 | INFO     | all data control threads have been joined
[2025-11-22 22:57:52] 2025-11-22 21:56:46,114 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,232 | INFO     | [payload] control thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:57:52] 2025-11-22 21:56:46,321 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,332 | INFO     | [job] validate thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,609 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,663 | INFO     | all job control threads have been joined
[2025-11-22 22:57:52] 2025-11-22 21:56:46,756 | INFO     | [data] control thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:57:52] 2025-11-22 21:56:46,890 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,974 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:46,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:57:52] 2025-11-22 21:56:47,124 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:47,471 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:47,534 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:47,550 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:47,669 | INFO     | [job] control thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:47,994 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:48,297 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:56:50,899 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:57:52] 2025-11-22 21:57:15,030 | INFO     | PID=15681 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:57:52] 2025-11-22 21:57:15,030 | INFO     | .. there are 9 such processes running
[2025-11-22 22:57:52] 2025-11-22 21:57:15,031 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:57:52] 2025-11-22 21:57:15,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:57:52] 2025-11-22 21:57:15,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:57:52] 2025-11-22 21:57:43,371 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:57:52] 2025-11-22 21:57:44,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140164167448384)>', '<ExcThread(monitor, started 140163506239232)>']
[2025-11-22 22:57:52] 2025-11-22 21:57:45,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:57:52] 2025-11-22 21:57:45,208 | INFO     | [monitor] control thread has ended
[2025-11-22 22:57:52] 2025-11-22 21:57:49,364 | INFO     | all workflow threads have been joined
[2025-11-22 22:57:52] 2025-11-22 21:57:49,365 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:57:52] 2025-11-22 21:57:49,365 | INFO     | traces error code: 0
[2025-11-22 22:57:52] 2025-11-22 21:57:49,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:57:52] 2025-11-22 21:57:49,840 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:57:52] 2025-11-22 21:57:49,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:57:52] 2025-11-22 21:57:50,062 [wrapper] pilotpid: 15681
[2025-11-22 22:57:52] 2025-11-22 21:57:50,163 [wrapper] Pilot exit status: 0
[2025-11-22 22:57:52] 2025-11-22 21:57:50,508 [wrapper] pandaids: 6891571873
[2025-11-22 22:57:52] 2025-11-22 21:57:51,550 [wrapper] cleanup supervisor_pilot 19299 15682
[2025-11-22 22:57:52] 2025-11-22 21:57:51,637 [wrapper] Test setup, not cleaning
[2025-11-22 22:57:52] 2025-11-22 21:57:51,749 [wrapper] apfmon messages muted
[2025-11-22 22:57:52] 2025-11-22 21:57:51,858 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:57:52] 2025-11-22 21:57:51,957 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:57:52]  *** Error codes and diagnostics ***
[2025-11-22 22:57:52]     "exeErrorCode": 0,
[2025-11-22 22:57:52]     "exeErrorDiag": "",
[2025-11-22 22:57:52]     "pilotErrorCode": 0,
[2025-11-22 22:57:52]     "pilotErrorDiag": "",
[2025-11-22 22:57:52]  *** Listing of results directory ***
[2025-11-22 22:57:52] total 1321380
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:03 queuedata.json
[2025-11-22 22:57:52] -rwx------. 1 boinc boinc     36292 Nov 18 17:04 runpilot2-wrapper.sh
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc       100 Nov 21 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:57:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 21:54 run_atlas
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc       105 Nov 21 21:54 job.xml
[2025-11-22 22:57:52] -rw-r--r--. 2 boinc boinc 406675968 Nov 21 21:54 EVNT.47493065._000309.pool.root.1
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc      6391 Nov 21 21:54 init_data.xml
[2025-11-22 22:57:52] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:54 start_atlas.sh
[2025-11-22 22:57:52] drwxrwx--x. 2 boinc boinc        68 Nov 21 21:54 shared
[2025-11-22 22:57:52] -rw-r--r--. 2 boinc boinc    590100 Nov 21 21:54 input.tar.gz
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc         0 Nov 21 21:54 boinc_lockfile
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc      2772 Nov 21 21:54 pandaJob.out
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc    989798 Nov 21 21:55 agis_schedconf.cvmfs.json
[2025-11-22 22:57:52] drwx------. 5 boinc boinc      4096 Nov 21 21:55 pilot3
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc       533 Nov 22 22:34 boinc_task_state.xml
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc 913461385 Nov 22 22:53 HITS.47493068._003082.pool.root.1
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc      1031 Nov 22 22:54 memory_monitor_summary.json
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc   1526164 Nov 22 22:55 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc   2542223 Nov 22 22:55 log.47493068._003082.job.log.tgz.1
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc      8640 Nov 22 22:56 heartbeat.json
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc        95 Nov 22 22:57 pilot_heartbeat.json
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc      8192 Nov 22 22:57 boinc_mmap_file
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc        29 Nov 22 22:57 wrapper_checkpoint.txt
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc      4884 Nov 22 22:57 pilotlog.txt
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc  11980711 Nov 22 22:57 log.47493068._003082.job.log.1
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc       353 Nov 22 22:57 output.list
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc       620 Nov 22 22:57 runtime_log
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc  14540800 Nov 22 22:57 result.tar.gz
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc      8703 Nov 22 22:57 runtime_log.err
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc       662 Nov 22 22:57 9S4MDmQNdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2RFKDmJTUlym.diag
[2025-11-22 22:57:52] -rw-r--r--. 1 boinc boinc     21488 Nov 22 22:57 stderr.txt
[2025-11-22 22:57:52] HITS file was successfully produced:
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc 913461385 Nov 22 22:53 shared/HITS.pool.root.1
[2025-11-22 22:57:52]  *** Contents of shared directory: ***
[2025-11-22 22:57:52] total 1304000
[2025-11-22 22:57:52] -rw-r--r--. 2 boinc boinc 406675968 Nov 21 21:54 ATLAS.root_0
[2025-11-22 22:57:52] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:54 start_atlas.sh
[2025-11-22 22:57:52] -rw-r--r--. 2 boinc boinc    590100 Nov 21 21:54 input.tar.gz
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc 913461385 Nov 22 22:53 HITS.pool.root.1
[2025-11-22 22:57:52] -rw-------. 1 boinc boinc  14540800 Nov 22 22:57 result.tar.gz
22:57:54 (11914): run_atlas exited; CPU time 334674.815404
22:57:54 (11914): called boinc_finish(0)

</stderr_txt>
]]>

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