Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:29:08 (26669): wrapper (7.7.26015): starting
15:29:08 (26669): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 15:29:08] Arguments: --nthreads 8
[2025-11-21 15:29:08] Threads: 8
[2025-11-21 15:29:08] Checking for CVMFS
[2025-11-21 15:29:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 15:29:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 15:29:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 15:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 15:29:10] 2.11.2.0 22385 278310 142060 153128 2 118 23086295 25165825 4462 130560 3 153775548 99.883 80685939 3199 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 15:29:10] CVMFS is ok
[2025-11-21 15:29:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 15:29:11] Checking for apptainer binary...
[2025-11-21 15:29:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 15:29:11] Running /usr/bin/apptainer --version
[2025-11-21 15:29:11] apptainer version 1.3.2-1.el7
[2025-11-21 15:29:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 15:29:18] cg-vwn497.simple-grid.lan
[2025-11-21 15:29:18] apptainer works
[2025-11-21 15:29:19] Set ATHENA_PROC_NUMBER=8
[2025-11-21 15:29:19] Set ATHENA_CORE_NUMBER=8
[2025-11-21 15:29:19] Starting ATLAS job with PandaID=6891570476
[2025-11-21 15:29:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 15:02:00]  *** The last 200 lines of the pilot log: ***
[2025-11-22 15:02:00] 2025-11-22 14:01:02,738 | INFO     | sum of square deviations: 806095262620.1995
[2025-11-22 15:02:00] 2025-11-22 14:01:02,798 | INFO     | sum of deviations: 2710458346105.269
[2025-11-22 15:02:00] 2025-11-22 14:01:02,799 | INFO     | mean x: 1763778043.4007273
[2025-11-22 15:02:00] 2025-11-22 14:01:02,799 | INFO     | mean y: 2883639.1301818183
[2025-11-22 15:02:00] 2025-11-22 14:01:02,799 | INFO     | intersect: -5927739129.788355
[2025-11-22 15:02:00] 2025-11-22 14:01:02,801 | INFO     | chi2: 17.242611782693174
[2025-11-22 15:02:00] 2025-11-22 14:01:02,802 | INFO     | sum of square deviations: 797334020642.8529
[2025-11-22 15:02:00] 2025-11-22 14:01:02,853 | INFO     | sum of deviations: 3170037958853.3745
[2025-11-22 15:02:00] 2025-11-22 14:01:02,854 | INFO     | mean x: 1763777890.9058394
[2025-11-22 15:02:00] 2025-11-22 14:01:02,854 | INFO     | mean y: 2891637.390510949
[2025-11-22 15:02:00] 2025-11-22 14:01:02,854 | INFO     | intersect: -7009530660.418758
[2025-11-22 15:02:00] 2025-11-22 14:01:02,856 | INFO     | chi2: 14.225532388043245
[2025-11-22 15:02:00] 2025-11-22 14:01:02,856 | INFO     | current chi2=14.225532388043245 (change=17.497809686107093 %)
[2025-11-22 15:02:00] 2025-11-22 14:01:02,856 | INFO     | right removable region: 1369
[2025-11-22 15:02:00] 2025-11-22 14:01:02,858 | INFO     | sum of square deviations: 797332845782.853
[2025-11-22 15:02:00] 2025-11-22 14:01:02,905 | INFO     | sum of deviations: 2125779802493.7485
[2025-11-22 15:02:00] 2025-11-22 14:01:02,906 | INFO     | mean x: 1763778195.9058394
[2025-11-22 15:02:00] 2025-11-22 14:01:02,906 | INFO     | mean y: 2893814.5562043795
[2025-11-22 15:02:00] 2025-11-22 14:01:02,906 | INFO     | intersect: -4699538908.197342
[2025-11-22 15:02:00] 2025-11-22 14:01:02,907 | INFO     | chi2: 12.442778199137024
[2025-11-22 15:02:00] 2025-11-22 14:01:02,908 | INFO     | current chi2=12.442778199137024 (change=27.83704489811607 %)
[2025-11-22 15:02:00] 2025-11-22 14:01:02,909 | INFO     | sum of square deviations: 788634151070.4366
[2025-11-22 15:02:00] 2025-11-22 14:01:02,947 | INFO     | time since job start (84459s) is within the limit (172800.0s)
[2025-11-22 15:02:00] 2025-11-22 14:01:02,965 | INFO     | sum of deviations: 1616314695471.5745
[2025-11-22 15:02:00] 2025-11-22 14:01:02,965 | INFO     | mean x: 1763778348.410989
[2025-11-22 15:02:00] 2025-11-22 14:01:02,965 | INFO     | mean y: 2902746.095238095
[2025-11-22 15:02:00] 2025-11-22 14:01:02,965 | INFO     | intersect: -3611981113.831142
[2025-11-22 15:02:00] 2025-11-22 14:01:02,967 | INFO     | chi2: 8.894637330539386
[2025-11-22 15:02:00] 2025-11-22 14:01:02,967 | INFO     | current chi2=8.894637330539386 (change=28.515664362189803 %)
[2025-11-22 15:02:00] 2025-11-22 14:01:02,969 | INFO     | sum of square deviations: 779998945920.4448
[2025-11-22 15:02:00] 2025-11-22 14:01:03,029 | INFO     | sum of deviations: 1210257804604.0854
[2025-11-22 15:02:00] 2025-11-22 14:01:03,030 | INFO     | mean x: 1763778500.9161766
[2025-11-22 15:02:00] 2025-11-22 14:01:03,030 | INFO     | mean y: 2909914.500735294
[2025-11-22 15:02:00] 2025-11-22 14:01:03,030 | INFO     | intersect: -2733794676.564719
[2025-11-22 15:02:00] 2025-11-22 14:01:03,031 | INFO     | chi2: 6.633309025977574
[2025-11-22 15:02:00] 2025-11-22 14:01:03,032 | INFO     | current chi2=6.633309025977574 (change=25.423502055532154 %)
[2025-11-22 15:02:00] 2025-11-22 14:01:03,033 | INFO     | sum of square deviations: 771427661337.0746
[2025-11-22 15:02:00] 2025-11-22 14:01:03,078 | INFO     | sum of deviations: 1109996112559.3425
[2025-11-22 15:02:00] 2025-11-22 14:01:03,078 | INFO     | mean x: 1763778653.4154983
[2025-11-22 15:02:00] 2025-11-22 14:01:03,078 | INFO     | mean y: 2911698.0597785977
[2025-11-22 15:02:00] 2025-11-22 14:01:03,079 | INFO     | intersect: -2534963914.6879234
[2025-11-22 15:02:00] 2025-11-22 14:01:03,080 | INFO     | chi2: 6.534833002867726
[2025-11-22 15:02:00] 2025-11-22 14:01:03,080 | INFO     | current chi2=6.534833002867726 (change=1.4845686025510516 %)
[2025-11-22 15:02:00] 2025-11-22 14:01:03,080 | INFO     | left removable region: 40
[2025-11-22 15:02:00] 2025-11-22 14:01:03,082 | INFO     | sum of square deviations: 727868042242.0344
[2025-11-22 15:02:00] 2025-11-22 14:01:03,144 | INFO     | sum of deviations: 1430721870202.8838
[2025-11-22 15:02:00] 2025-11-22 14:01:03,144 | INFO     | mean x: 1763779080.4213696
[2025-11-22 15:02:00] 2025-11-22 14:01:03,144 | INFO     | mean y: 2926144.5252069226
[2025-11-22 15:02:00] 2025-11-22 14:01:03,144 | INFO     | intersect: -3464017254.709877
[2025-11-22 15:02:00] 2025-11-22 14:01:03,146 | INFO     | chi2: 2.5831335109347093
[2025-11-22 15:02:00] 2025-11-22 14:01:03,146 | INFO     | current memory leak: 1.97 B/s (using 1329 data points, chi2=2.58)
[2025-11-22 15:02:00] 2025-11-22 14:01:03,148 | INFO     | could have reported an average CPU frequency of 2249 MHz (47 samples)
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | ..............................
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . Timing measurements:
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . get job = 0 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . initial setup = 5 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . payload setup = 167 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . stage-in = 0 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . payload execution = 84002 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . stage-out = 5 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | . log creation = 2 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,149 | INFO     | ..............................
[2025-11-22 15:02:00] 2025-11-22 14:01:03,259 | INFO     | 
[2025-11-22 15:02:00] 2025-11-22 14:01:03,259 | INFO     | job summary report
[2025-11-22 15:02:00] 2025-11-22 14:01:03,259 | INFO     | --------------------------------------------------
[2025-11-22 15:02:00] 2025-11-22 14:01:03,259 | INFO     | PanDA job id: 6891570476
[2025-11-22 15:02:00] 2025-11-22 14:01:03,259 | INFO     | task id: 47493068
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | errors: (none)
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | pilot state: finished 
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | transexitcode: 0
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | exeerrorcode: 0
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | exeerrordiag: 
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | exitcode: 0
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | exitmsg: OK
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | cpuconsumptiontime: 302898 s
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | nevents: 1000
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | neventsw: 0
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | pid: 4654
[2025-11-22 15:02:00] 2025-11-22 14:01:03,260 | INFO     | pgrp: 4654
[2025-11-22 15:02:00] 2025-11-22 14:01:03,261 | INFO     | corecount: 8
[2025-11-22 15:02:00] 2025-11-22 14:01:03,261 | INFO     | event service: False
[2025-11-22 15:02:00] 2025-11-22 14:01:03,261 | INFO     | sizes: {0: 2297968, 1: 2298654, 2: 2298853, 13: 2298853, 23: 2298909, 34: 2298937, 45: 2299093, 56: 2299121, 66: 2299149, 77: 2299177, 88: 2299233, 93: 2299803, 98
[2025-11-22 15:02:00] 2025-11-22 14:01:03,261 | INFO     | --------------------------------------------------
[2025-11-22 15:02:00] 2025-11-22 14:01:03,261 | INFO     | 
[2025-11-22 15:02:00] 2025-11-22 14:01:03,261 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-22 15:02:00] 2025-11-22 14:01:03,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 15:02:00] 2025-11-22 14:01:03,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 15:02:00] 2025-11-22 14:01:03,819 | INFO     | job 6891570476 has completed (purged errors)
[2025-11-22 15:02:00] 2025-11-22 14:01:03,819 | INFO     | overall cleanup function is called
[2025-11-22 15:02:00] 2025-11-22 14:01:04,843 | INFO     | --- collectZombieJob: --- 10, [4654]
[2025-11-22 15:02:00] 2025-11-22 14:01:04,843 | INFO     | zombie collector waiting for pid 4654
[2025-11-22 15:02:00] 2025-11-22 14:01:04,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 15:02:00] 2025-11-22 14:01:04,844 | INFO     | collected zombie processes
[2025-11-22 15:02:00] 2025-11-22 14:01:04,844 | INFO     | will attempt to kill all subprocesses of pid=4654
[2025-11-22 15:02:00] 2025-11-22 14:01:05,004 | INFO     | process IDs to be killed: [4654] (in reverse order)
[2025-11-22 15:02:00] 2025-11-22 14:01:05,981 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 15:02:00] 2025-11-22 14:01:05,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 15:02:00] 2025-11-22 14:01:05,985 | INFO     | did not find any defunct processes belonging to 4654
[2025-11-22 15:02:00] 2025-11-22 14:01:05,988 | INFO     | did not find any defunct processes belonging to 4654
[2025-11-22 15:02:00] 2025-11-22 14:01:06,002 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 15:02:00] 2025-11-22 14:01:06,003 | INFO     | ready for new job
[2025-11-22 15:02:00] 2025-11-22 14:01:06,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 15:02:00] 2025-11-22 14:01:06,009 | INFO     | ***************************************
[2025-11-22 15:02:00] 2025-11-22 14:01:06,009 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 15:02:00] 2025-11-22 14:01:06,010 | INFO     | ***************************************
[2025-11-22 15:02:00] 2025-11-22 14:01:06,010 | INFO     | 
[2025-11-22 15:02:00] 2025-11-22 14:01:06,010 | INFO     | pilot is running in a VM
[2025-11-22 15:02:00] 2025-11-22 14:01:06,010 | INFO     | architecture information:
[2025-11-22 15:02:00] 2025-11-22 14:01:06,025 | INFO     | executing command: cat /etc/os-release
[2025-11-22 15:02:00] 2025-11-22 14:01:06,305 | INFO     | cat /etc/os-release:
[2025-11-22 15:02:00] NAME="CentOS Linux"
[2025-11-22 15:02:00] VERSION="7 (Core)"
[2025-11-22 15:02:00] ID="centos"
[2025-11-22 15:02:00] ID_LIKE="rhel fedora"
[2025-11-22 15:02:00] VERSION_ID="7"
[2025-11-22 15:02:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 15:02:00] ANSI_COLOR="0;31"
[2025-11-22 15:02:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 15:02:00] HOME_URL="https://www.centos.org/"
[2025-11-22 15:02:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 15:02:00] 
[2025-11-22 15:02:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 15:02:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 15:02:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 15:02:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 15:02:00] 
[2025-11-22 15:02:00] 2025-11-22 14:01:06,305 | INFO     | ***************************************
[2025-11-22 15:02:00] 2025-11-22 14:01:06,808 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-22 15:02:00] 2025-11-22 14:01:07,065 | INFO     | sufficient remaining disk space (494560870400 B)
[2025-11-22 15:02:00] 2025-11-22 14:01:07,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 15:02:00] 2025-11-22 14:01:07,070 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 15:02:00] 2025-11-22 14:01:07,070 | INFO     | update_server=False
[2025-11-22 15:02:00] 2025-11-22 14:01:07,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 15:02:00] 2025-11-22 14:01:07,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 15:02:00] 2025-11-22 14:01:07,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 15:02:00] 2025-11-22 14:01:07,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:02:00] 2025-11-22 14:01:07,795 | INFO     | aborting loop
[2025-11-22 15:02:00] 2025-11-22 14:01:08,025 | INFO     | all data control threads have been joined
[2025-11-22 15:02:00] 2025-11-22 14:01:08,076 | INFO     | [job] retrieve thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:08,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:02:00] 2025-11-22 14:01:08,283 | INFO     | all payload control threads have been joined
[2025-11-22 15:02:00] 2025-11-22 14:01:08,295 | INFO     | all job control threads have been joined
[2025-11-22 15:02:00] 2025-11-22 14:01:08,768 | INFO     | [payload] failed_post thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:08,777 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:08,800 | INFO     | [job] job monitor thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:08,822 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:08,823 | INFO     | [data] copytool_in thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,031 | INFO     | [data] control thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,159 | INFO     | [data] copytool_out thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,283 | INFO     | [job] queue monitor thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,289 | INFO     | [payload] control thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,303 | INFO     | [job] control thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,388 | INFO     | [payload] validate_post thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,502 | INFO     | [job] validate thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:09,568 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:11,080 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:17,364 | INFO     | job.realtimelogging is not enabled
[2025-11-22 15:02:00] 2025-11-22 14:01:18,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 15:02:00] 2025-11-22 14:01:36,188 | INFO     | PID=30475 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 15:02:00] 2025-11-22 14:01:36,188 | INFO     | .. there are 9 such processes running
[2025-11-22 15:02:00] 2025-11-22 14:01:36,189 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 15:02:00] 2025-11-22 14:01:36,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 15:02:00] 2025-11-22 14:01:36,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 15:02:00] 2025-11-22 14:01:50,083 | INFO     | [monitor] cgroup control has ended
[2025-11-22 15:02:00] 2025-11-22 14:01:50,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202979125056)>', '<ExcThread(monitor, started 140202538419968)>']
[2025-11-22 15:02:00] 2025-11-22 14:01:51,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 15:02:00] 2025-11-22 14:01:51,280 | INFO     | [monitor] control thread has ended
[2025-11-22 15:02:00] 2025-11-22 14:01:55,349 | INFO     | all workflow threads have been joined
[2025-11-22 15:02:00] 2025-11-22 14:01:55,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 15:02:00] 2025-11-22 14:01:55,350 | INFO     | traces error code: 0
[2025-11-22 15:02:00] 2025-11-22 14:01:55,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 15:02:00] 2025-11-22 14:01:55,673 [wrapper] ==== pilot stdout END ====
[2025-11-22 15:02:00] 2025-11-22 14:01:55,801 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 15:02:00] 2025-11-22 14:01:55,928 [wrapper] pilotpid: 30475
[2025-11-22 15:02:00] 2025-11-22 14:01:56,051 [wrapper] Pilot exit status: 0
[2025-11-22 15:02:00] 2025-11-22 14:01:56,516 [wrapper] pandaids: 6891570476
[2025-11-22 15:02:00] 2025-11-22 14:01:57,569 [wrapper] cleanup supervisor_pilot  8440 30476
[2025-11-22 15:02:00] 2025-11-22 14:01:57,720 [wrapper] Test setup, not cleaning
[2025-11-22 15:02:00] 2025-11-22 14:01:57,834 [wrapper] apfmon messages muted
[2025-11-22 15:02:00] 2025-11-22 14:01:57,986 [wrapper] ==== wrapper stdout END ====
[2025-11-22 15:02:00] 2025-11-22 14:01:58,122 [wrapper] ==== wrapper stderr END ====
[2025-11-22 15:02:00]  *** Error codes and diagnostics ***
[2025-11-22 15:02:00]     "exeErrorCode": 0,
[2025-11-22 15:02:00]     "exeErrorDiag": "",
[2025-11-22 15:02:00]     "pilotErrorCode": 0,
[2025-11-22 15:02:00]     "pilotErrorDiag": "",
[2025-11-22 15:02:00]  *** Listing of results directory ***
[2025-11-22 15:02:00] total 1335784
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:39 queuedata.json
[2025-11-22 15:02:00] -rwx------. 1 boinc boinc     36292 Nov 18 16:40 runpilot2-wrapper.sh
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc       100 Nov 21 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 15:02:00] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 15:29 run_atlas
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc       105 Nov 21 15:29 job.xml
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc      6391 Nov 21 15:29 init_data.xml
[2025-11-22 15:02:00] -rw-r--r--. 2 boinc boinc 411212453 Nov 21 15:29 EVNT.47493065._000235.pool.root.1
[2025-11-22 15:02:00] -rw-r--r--. 2 boinc boinc     15120 Nov 21 15:29 start_atlas.sh
[2025-11-22 15:02:00] drwxrwx--x. 2 boinc boinc        68 Nov 21 15:29 shared
[2025-11-22 15:02:00] -rw-r--r--. 2 boinc boinc    590098 Nov 21 15:29 input.tar.gz
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc         0 Nov 21 15:29 boinc_lockfile
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc      2773 Nov 21 15:29 pandaJob.out
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc    989817 Nov 21 15:33 agis_schedconf.cvmfs.json
[2025-11-22 15:02:00] drwx------. 5 boinc boinc      4096 Nov 21 15:33 pilot3
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc       533 Nov 22 14:47 boinc_task_state.xml
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc 925117297 Nov 22 14:58 HITS.47493068._002347.pool.root.1
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc      1031 Nov 22 14:59 memory_monitor_summary.json
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc   1526164 Nov 22 14:59 agis_ddmendpoints.agis.ALL.json
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc   2482006 Nov 22 14:59 log.47493068._002347.job.log.tgz.1
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc      8638 Nov 22 15:01 heartbeat.json
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc        95 Nov 22 15:01 pilot_heartbeat.json
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc      8192 Nov 22 15:01 boinc_mmap_file
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc        29 Nov 22 15:01 wrapper_checkpoint.txt
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc      4957 Nov 22 15:01 pilotlog.txt
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc  11318246 Nov 22 15:01 log.47493068._002347.job.log.1
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc       353 Nov 22 15:02 output.list
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc       620 Nov 22 15:02 runtime_log
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc  13824000 Nov 22 15:02 result.tar.gz
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc      8717 Nov 22 15:02 runtime_log.err
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc       662 Nov 22 15:02 jwsNDmjzcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjcFKDm7fbGJo.diag
[2025-11-22 15:02:00] -rw-r--r--. 1 boinc boinc     20858 Nov 22 15:02 stderr.txt
[2025-11-22 15:02:00] HITS file was successfully produced:
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc 925117297 Nov 22 14:58 shared/HITS.pool.root.1
[2025-11-22 15:02:00]  *** Contents of shared directory: ***
[2025-11-22 15:02:00] total 1319108
[2025-11-22 15:02:00] -rw-r--r--. 2 boinc boinc 411212453 Nov 21 15:29 ATLAS.root_0
[2025-11-22 15:02:00] -rw-r--r--. 2 boinc boinc     15120 Nov 21 15:29 start_atlas.sh
[2025-11-22 15:02:00] -rw-r--r--. 2 boinc boinc    590098 Nov 21 15:29 input.tar.gz
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc 925117297 Nov 22 14:58 HITS.pool.root.1
[2025-11-22 15:02:00] -rw-------. 1 boinc boinc  13824000 Nov 22 15:02 result.tar.gz
15:02:02 (26669): run_atlas exited; CPU time 303267.018037
15:02:02 (26669): called boinc_finish(0)

</stderr_txt>
]]>

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