Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:11:14 (25150): wrapper (7.7.26015): starting
22:11:14 (25150): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 22:11:14] Arguments: --nthreads 8
[2025-11-19 22:11:14] Threads: 8
[2025-11-19 22:11:14] Checking for CVMFS
[2025-11-19 22:11:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 22:11:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 22:11:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 22:11:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 22:11:16] 2.11.2.0 5744 275763 142384 153056 3 187 17663619 25165824 4620 130560 2 158446141 99.888 79976337 3443 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 22:11:16] CVMFS is ok
[2025-11-19 22:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 22:11:16] Checking for apptainer binary...
[2025-11-19 22:11:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 22:11:16] Running /usr/bin/apptainer --version
[2025-11-19 22:11:17] apptainer version 1.3.2-1.el7
[2025-11-19 22:11:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 22:11:42] cg-vwn299.simple-grid.lan
[2025-11-19 22:11:42] apptainer works
[2025-11-19 22:11:42] Set ATHENA_PROC_NUMBER=8
[2025-11-19 22:11:42] Set ATHENA_CORE_NUMBER=8
[2025-11-19 22:11:42] Starting ATLAS job with PandaID=6891572143
[2025-11-19 22:11:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:35:25]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:35:25] 2025-11-20 22:34:49,871 | INFO     | intersect: -6076095798.401486
[2025-11-20 23:35:25] 2025-11-20 22:34:49,873 | INFO     | chi2: 7.2829247469761
[2025-11-20 23:35:25] 2025-11-20 22:34:49,875 | INFO     | sum of square deviations: 1023677295217.6116
[2025-11-20 23:35:25] 2025-11-20 22:34:49,934 | INFO     | sum of deviations: 4033879287417.9985
[2025-11-20 23:35:25] 2025-11-20 22:34:49,935 | INFO     | mean x: 1763632334.3613162
[2025-11-20 23:35:25] 2025-11-20 22:34:49,935 | INFO     | mean y: 2888966.6319677634
[2025-11-20 23:35:25] 2025-11-20 22:34:49,935 | INFO     | intersect: -6946840188.676127
[2025-11-20 23:35:25] 2025-11-20 22:34:49,937 | INFO     | chi2: 4.5517082919833864
[2025-11-20 23:35:25] 2025-11-20 22:34:49,937 | INFO     | current chi2=4.5517082919833864 (change=37.501643225501205 %)
[2025-11-20 23:35:25] 2025-11-20 22:34:49,939 | INFO     | sum of square deviations: 1013400120738.3135
[2025-11-20 23:35:25] 2025-11-20 22:34:50,000 | INFO     | sum of deviations: 4369675941887.0947
[2025-11-20 23:35:25] 2025-11-20 22:34:50,001 | INFO     | mean x: 1763632181.865903
[2025-11-20 23:35:25] 2025-11-20 22:34:50,001 | INFO     | mean y: 2893946.2567385444
[2025-11-20 23:35:25] 2025-11-20 22:34:50,001 | INFO     | intersect: -7601704630.091075
[2025-11-20 23:35:25] 2025-11-20 22:34:50,003 | INFO     | chi2: 2.842686186882888
[2025-11-20 23:35:25] 2025-11-20 22:34:50,003 | INFO     | current chi2=2.842686186882888 (change=37.54682847559636 %)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,008 | INFO     | sum of square deviations: 1003191608963.9082
[2025-11-20 23:35:25] 2025-11-20 22:34:50,072 | INFO     | sum of deviations: 4427343838267.011
[2025-11-20 23:35:25] 2025-11-20 22:34:50,073 | INFO     | mean x: 1763632029.3678162
[2025-11-20 23:35:25] 2025-11-20 22:34:50,073 | INFO     | mean y: 2894805.718728871
[2025-11-20 23:35:25] 2025-11-20 22:34:50,073 | INFO     | intersect: -7780469138.339999
[2025-11-20 23:35:25] 2025-11-20 22:34:50,075 | INFO     | chi2: 2.685296402436024
[2025-11-20 23:35:25] 2025-11-20 22:34:50,075 | INFO     | current chi2=2.685296402436024 (change=5.536657024370583 %)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,075 | INFO     | right removable region: 1478
[2025-11-20 23:35:25] 2025-11-20 22:34:50,078 | INFO     | sum of square deviations: 1023676058747.6113
[2025-11-20 23:35:25] 2025-11-20 22:34:50,149 | INFO     | sum of deviations: 3118556638351.2227
[2025-11-20 23:35:25] 2025-11-20 22:34:50,149 | INFO     | mean x: 1763632639.3613162
[2025-11-20 23:35:25] 2025-11-20 22:34:50,149 | INFO     | mean y: 2888606.3787777033
[2025-11-20 23:35:25] 2025-11-20 22:34:50,149 | INFO     | intersect: -5369893367.072797
[2025-11-20 23:35:25] 2025-11-20 22:34:50,151 | INFO     | chi2: 4.941115581404245
[2025-11-20 23:35:25] 2025-11-20 22:34:50,152 | INFO     | current chi2=4.941115581404245 (change=32.15479010055931 %)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,154 | INFO     | sum of square deviations: 1013398374194.1257
[2025-11-20 23:35:25] 2025-11-20 22:34:50,195 | INFO     | monitor loop #6047: job 0:6891572143 is in state 'finished'
[2025-11-20 23:35:25] 2025-11-20 22:34:50,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,225 | INFO     | sum of deviations: 3011967956126.5176
[2025-11-20 23:35:25] 2025-11-20 22:34:50,225 | INFO     | mean x: 1763632791.860512
[2025-11-20 23:35:25] 2025-11-20 22:34:50,225 | INFO     | mean y: 2890187.7270889487
[2025-11-20 23:35:25] 2025-11-20 22:34:50,225 | INFO     | intersect: -5238884015.514575
[2025-11-20 23:35:25] 2025-11-20 22:34:50,227 | INFO     | chi2: 4.874771414288116
[2025-11-20 23:35:25] 2025-11-20 22:34:50,228 | INFO     | current chi2=4.874771414288116 (change=1.3426961183788815 %)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,228 | INFO     | left removable region: 20
[2025-11-20 23:35:25] 2025-11-20 22:34:50,230 | INFO     | sum of square deviations: 961062735446.2712
[2025-11-20 23:35:25] 2025-11-20 22:34:50,294 | INFO     | sum of deviations: 3716349970663.9355
[2025-11-20 23:35:25] 2025-11-20 22:34:50,294 | INFO     | mean x: 1763632608.872428
[2025-11-20 23:35:25] 2025-11-20 22:34:50,295 | INFO     | mean y: 2905364.015775034
[2025-11-20 23:35:25] 2025-11-20 22:34:50,295 | INFO     | intersect: -6816915811.5514145
[2025-11-20 23:35:25] 2025-11-20 22:34:50,297 | INFO     | chi2: 0.22269757758932893
[2025-11-20 23:35:25] 2025-11-20 22:34:50,297 | INFO     | current memory leak: 3.87 B/s (using 1458 data points, chi2=0.22)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,299 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | ..............................
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . Timing measurements:
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . get job = 0 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . initial setup = 2 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . payload setup = 13 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . stage-in = 0 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . payload execution = 91141 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . stage-out = 4 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,300 | INFO     | . log creation = 1 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,301 | INFO     | ..............................
[2025-11-20 23:35:25] 2025-11-20 22:34:50,635 | INFO     | time since job start (91209s) is within the limit (172800.0s)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,924 | INFO     | 
[2025-11-20 23:35:25] 2025-11-20 22:34:50,924 | INFO     | job summary report
[2025-11-20 23:35:25] 2025-11-20 22:34:50,924 | INFO     | --------------------------------------------------
[2025-11-20 23:35:25] 2025-11-20 22:34:50,924 | INFO     | PanDA job id: 6891572143
[2025-11-20 23:35:25] 2025-11-20 22:34:50,924 | INFO     | task id: 47493068
[2025-11-20 23:35:25] 2025-11-20 22:34:50,924 | INFO     | errors: (none)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | pilot state: finished 
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | transexitcode: 0
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | exeerrorcode: 0
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | exeerrordiag: 
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | exitcode: 0
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | exitmsg: OK
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | cpuconsumptiontime: 340782 s
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | nevents: 1000
[2025-11-20 23:35:25] 2025-11-20 22:34:50,925 | INFO     | neventsw: 0
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | pid: 3063
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | pgrp: 3063
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | corecount: 8
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | event service: False
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | sizes: {0: 2296366, 1: 2297051, 2: 2297250, 13: 2297250, 14: 2297568, 23: 2297596, 91158: 2361718, 91159: 2361717, 91164: 2372419, 91177: 2372609}
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | --------------------------------------------------
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | 
[2025-11-20 23:35:25] 2025-11-20 22:34:50,926 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-20 23:35:25] 2025-11-20 22:34:50,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:35:25] 2025-11-20 22:34:50,961 | INFO     | job 6891572143 has completed (purged errors)
[2025-11-20 23:35:25] 2025-11-20 22:34:50,961 | INFO     | overall cleanup function is called
[2025-11-20 23:35:25] 2025-11-20 22:34:51,792 | INFO     | PID=28935 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 23:35:25] 2025-11-20 22:34:51,793 | INFO     | .. there are 9 such processes running
[2025-11-20 23:35:25] 2025-11-20 22:34:51,981 | INFO     | --- collectZombieJob: --- 10, [3063]
[2025-11-20 23:35:25] 2025-11-20 22:34:51,982 | INFO     | zombie collector waiting for pid 3063
[2025-11-20 23:35:25] 2025-11-20 22:34:51,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:35:25] 2025-11-20 22:34:51,982 | INFO     | collected zombie processes
[2025-11-20 23:35:25] 2025-11-20 22:34:51,982 | INFO     | will attempt to kill all subprocesses of pid=3063
[2025-11-20 23:35:25] 2025-11-20 22:34:52,088 | INFO     | process IDs to be killed: [3063] (in reverse order)
[2025-11-20 23:35:25] 2025-11-20 22:34:52,270 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:35:25] 2025-11-20 22:34:52,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:35:25] 2025-11-20 22:34:52,275 | INFO     | did not find any defunct processes belonging to 3063
[2025-11-20 23:35:25] 2025-11-20 22:34:52,278 | INFO     | did not find any defunct processes belonging to 3063
[2025-11-20 23:35:25] 2025-11-20 22:34:52,286 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:35:25] 2025-11-20 22:34:52,286 | INFO     | ready for new job
[2025-11-20 23:35:25] 2025-11-20 22:34:52,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:35:25] 2025-11-20 22:34:52,292 | INFO     | ***************************************
[2025-11-20 23:35:25] 2025-11-20 22:34:52,293 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:35:25] 2025-11-20 22:34:52,293 | INFO     | ***************************************
[2025-11-20 23:35:25] 2025-11-20 22:34:52,293 | INFO     | 
[2025-11-20 23:35:25] 2025-11-20 22:34:52,294 | INFO     | pilot is running in a VM
[2025-11-20 23:35:25] 2025-11-20 22:34:52,294 | INFO     | architecture information:
[2025-11-20 23:35:25] 2025-11-20 22:34:52,295 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:35:25] 2025-11-20 22:34:52,322 | INFO     | cat /etc/os-release:
[2025-11-20 23:35:25] NAME="CentOS Linux"
[2025-11-20 23:35:25] VERSION="7 (Core)"
[2025-11-20 23:35:25] ID="centos"
[2025-11-20 23:35:25] ID_LIKE="rhel fedora"
[2025-11-20 23:35:25] VERSION_ID="7"
[2025-11-20 23:35:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:35:25] ANSI_COLOR="0;31"
[2025-11-20 23:35:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:35:25] HOME_URL="https://www.centos.org/"
[2025-11-20 23:35:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:35:25] 
[2025-11-20 23:35:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:35:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:35:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:35:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:35:25] 
[2025-11-20 23:35:25] 2025-11-20 22:34:52,322 | INFO     | ***************************************
[2025-11-20 23:35:25] 2025-11-20 22:34:52,826 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-20 23:35:25] 2025-11-20 22:34:52,927 | INFO     | sufficient remaining disk space (494501101568 B)
[2025-11-20 23:35:25] 2025-11-20 22:34:52,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:35:25] 2025-11-20 22:34:52,927 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:35:25] 2025-11-20 22:34:52,928 | INFO     | update_server=False
[2025-11-20 23:35:25] 2025-11-20 22:34:52,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:35:25] 2025-11-20 22:34:52,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:35:25] 2025-11-20 22:34:53,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:35:25] 2025-11-20 22:34:53,179 | INFO     | all data control threads have been joined
[2025-11-20 23:35:25] 2025-11-20 22:34:53,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:35:25] 2025-11-20 22:34:53,705 | INFO     | aborting loop
[2025-11-20 23:35:25] 2025-11-20 22:34:53,933 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:53,970 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:54,097 | INFO     | all payload control threads have been joined
[2025-11-20 23:35:25] 2025-11-20 22:34:54,132 | INFO     | all job control threads have been joined
[2025-11-20 23:35:25] 2025-11-20 22:34:54,185 | INFO     | [data] control thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:54,471 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:54,644 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:54,661 | INFO     | [job] validate thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:54,707 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:54,935 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:55,104 | INFO     | [payload] control thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:55,139 | INFO     | [job] control thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:55,158 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:55,354 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:55,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:35:25] 2025-11-20 22:34:55,487 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:56,451 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:34:57,139 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:35:03,251 | INFO     | job.realtimelogging is not enabled
[2025-11-20 23:35:25] 2025-11-20 22:35:04,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:35:25] 2025-11-20 22:35:19,968 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:35:25] 2025-11-20 22:35:19,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271294093120)>', '<ExcThread(monitor, started 140270863636224)>']
[2025-11-20 23:35:25] 2025-11-20 22:35:23,995 | INFO     | PID=28935 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 23:35:25] 2025-11-20 22:35:23,996 | INFO     | .. there are 9 such processes running
[2025-11-20 23:35:25] 2025-11-20 22:35:23,996 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:35:25] 2025-11-20 22:35:23,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:35:25] 2025-11-20 22:35:23,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:35:25] 2025-11-20 22:35:23,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:35:25] 2025-11-20 22:35:23,996 | INFO     | [monitor] control thread has ended
[2025-11-20 23:35:25] 2025-11-20 22:35:24,983 | INFO     | all workflow threads have been joined
[2025-11-20 23:35:25] 2025-11-20 22:35:24,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:35:25] 2025-11-20 22:35:24,983 | INFO     | traces error code: 0
[2025-11-20 23:35:25] 2025-11-20 22:35:24,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:35:25] 2025-11-20 22:35:25,234 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:35:25] 2025-11-20 22:35:25,245 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:35:25] 2025-11-20 22:35:25,251 [wrapper] pilotpid: 28935
[2025-11-20 23:35:25] 2025-11-20 22:35:25,254 [wrapper] Pilot exit status: 0
[2025-11-20 23:35:25] 2025-11-20 22:35:25,281 [wrapper] pandaids: 6891572143
[2025-11-20 23:35:25] 2025-11-20 22:35:25,327 [wrapper] cleanup supervisor_pilot  9417 28936
[2025-11-20 23:35:25] 2025-11-20 22:35:25,344 [wrapper] Test setup, not cleaning
[2025-11-20 23:35:25] 2025-11-20 22:35:25,347 [wrapper] apfmon messages muted
[2025-11-20 23:35:25] 2025-11-20 22:35:25,353 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:35:25] 2025-11-20 22:35:25,356 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:35:25]  *** Error codes and diagnostics ***
[2025-11-20 23:35:25]     "exeErrorCode": 0,
[2025-11-20 23:35:25]     "exeErrorDiag": "",
[2025-11-20 23:35:25]     "pilotErrorCode": 0,
[2025-11-20 23:35:25]     "pilotErrorDiag": "",
[2025-11-20 23:35:25]  *** Listing of results directory ***
[2025-11-20 23:35:25] total 1332248
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-20 23:35:25] -rwx------. 1 boinc boinc     36292 Nov 18 17:18 runpilot2-wrapper.sh
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:18 queuedata.json
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc       100 Nov 19 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:35:25] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 22:11 run_atlas
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc       105 Nov 19 22:11 job.xml
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc      6387 Nov 19 22:11 init_data.xml
[2025-11-20 23:35:25] -rw-r--r--. 2 boinc boinc 410614358 Nov 19 22:11 EVNT.47493065._000332.pool.root.1
[2025-11-20 23:35:25] -rw-r--r--. 2 boinc boinc     15120 Nov 19 22:11 start_atlas.sh
[2025-11-20 23:35:25] drwxrwx--x. 2 boinc boinc        68 Nov 19 22:11 shared
[2025-11-20 23:35:25] -rw-r--r--. 2 boinc boinc    590095 Nov 19 22:11 input.tar.gz
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc         0 Nov 19 22:11 boinc_lockfile
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc      2770 Nov 19 22:11 pandaJob.out
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc    989443 Nov 19 22:14 agis_schedconf.cvmfs.json
[2025-11-20 23:35:25] drwx------. 5 boinc boinc      4096 Nov 19 22:14 pilot3
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc       533 Nov 20 23:19 boinc_task_state.xml
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc 920389797 Nov 20 23:33 HITS.47493068._003311.pool.root.1
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc      1033 Nov 20 23:34 memory_monitor_summary.json
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc        95 Nov 20 23:34 pilot_heartbeat.json
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc   1526164 Nov 20 23:34 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc   2555768 Nov 20 23:34 log.47493068._003311.job.log.tgz.1
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc      8623 Nov 20 23:34 heartbeat.json
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc      8192 Nov 20 23:35 boinc_mmap_file
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc        29 Nov 20 23:35 wrapper_checkpoint.txt
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc      4956 Nov 20 23:35 pilotlog.txt
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc  12099292 Nov 20 23:35 log.47493068._003311.job.log.1
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc       353 Nov 20 23:35 output.list
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc       620 Nov 20 23:35 runtime_log
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc  14673920 Nov 20 23:35 result.tar.gz
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc      8703 Nov 20 23:35 runtime_log.err
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc       662 Nov 20 23:35 2XlNDmiadf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9kFKDmlF77Co.diag
[2025-11-20 23:35:25] -rw-r--r--. 1 boinc boinc     21041 Nov 20 23:35 stderr.txt
[2025-11-20 23:35:25] HITS file was successfully produced:
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc 920389797 Nov 20 23:33 shared/HITS.pool.root.1
[2025-11-20 23:35:25]  *** Contents of shared directory: ***
[2025-11-20 23:35:25] total 1314740
[2025-11-20 23:35:25] -rw-r--r--. 2 boinc boinc 410614358 Nov 19 22:11 ATLAS.root_0
[2025-11-20 23:35:25] -rw-r--r--. 2 boinc boinc     15120 Nov 19 22:11 start_atlas.sh
[2025-11-20 23:35:25] -rw-r--r--. 2 boinc boinc    590095 Nov 19 22:11 input.tar.gz
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc 920389797 Nov 20 23:33 HITS.pool.root.1
[2025-11-20 23:35:25] -rw-------. 1 boinc boinc  14673920 Nov 20 23:35 result.tar.gz
23:35:27 (25150): run_atlas exited; CPU time 341278.889133
23:35:27 (25150): called boinc_finish(0)

</stderr_txt>
]]>

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