Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:35:33 (11787): wrapper (7.7.26015): starting
23:35:33 (11787): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:35:33] Arguments: --nthreads 8
[2025-11-20 23:35:33] Threads: 8
[2025-11-20 23:35:33] Checking for CVMFS
[2025-11-20 23:35:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:35:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:35:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:35:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:35:34] 2.11.2.0 5744 277287 141244 153098 1 233 18354526 25165824 4147 130560 2 159073837 99.888 80192933 3433 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 23:35:34] CVMFS is ok
[2025-11-20 23:35:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:35:34] Checking for apptainer binary...
[2025-11-20 23:35:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:35:34] Running /usr/bin/apptainer --version
[2025-11-20 23:35:34] apptainer version 1.3.2-1.el7
[2025-11-20 23:35:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:35:35] cg-vwn299.simple-grid.lan
[2025-11-20 23:35:35] apptainer works
[2025-11-20 23:35:35] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:35:35] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:35:35] Starting ATLAS job with PandaID=6891572163
[2025-11-20 23:35:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 01:18:54]  *** The last 200 lines of the pilot log: ***
[2025-11-22 01:18:54] 2025-11-22 00:17:38,089 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:18:54] 2025-11-22 00:17:38,857 | INFO     | time since job start (92496s) is within the limit (172800.0s)
[2025-11-22 01:18:54] 2025-11-22 00:17:40,594 | INFO     | monitor loop #6145: job 0:6891572163 is in state 'finished'
[2025-11-22 01:18:54] 2025-11-22 00:17:40,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:18:54] 2025-11-22 00:17:40,869 | INFO     | time since job start (92498s) is within the limit (172800.0s)
[2025-11-22 01:18:54] 2025-11-22 00:17:42,153 | INFO     | PID=15518 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:18:54] 2025-11-22 00:17:42,153 | INFO     | .. there are 9 such processes running
[2025-11-22 01:18:54] 2025-11-22 00:17:43,100 | INFO     | monitor loop #6146: job 0:6891572163 is in state 'finished'
[2025-11-22 01:18:54] 2025-11-22 00:17:43,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:18:54] 2025-11-22 00:17:43,155 | INFO     | time since job start (92501s) is within the limit (172800.0s)
[2025-11-22 01:18:54] 2025-11-22 00:17:45,163 | INFO     | time since job start (92503s) is within the limit (172800.0s)
[2025-11-22 01:18:54] 2025-11-22 00:17:45,606 | INFO     | monitor loop #6147: job 0:6891572163 is in state 'finished'
[2025-11-22 01:18:54] 2025-11-22 00:17:45,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:18:54] 2025-11-22 00:17:46,613 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 01:18:54] 2025-11-22 00:17:46,614 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-22 01:18:54] 2025-11-22 00:17:46,616 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6891572163/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 01:18:54] 2025-11-22 00:17:46,617 | INFO     | extracted standard info from prmon json
[2025-11-22 01:18:54] 2025-11-22 00:17:46,617 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 01:18:54] 2025-11-22 00:17:46,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 01:18:54] 2025-11-22 00:17:46,653 | INFO     | fitting pss+swap vs Time
[2025-11-22 01:18:54] 2025-11-22 00:17:46,655 | INFO     | sum of square deviations: 1076383540047.1768
[2025-11-22 01:18:54] 2025-11-22 00:17:46,721 | INFO     | sum of deviations: 2563095544906.0
[2025-11-22 01:18:54] 2025-11-22 00:17:46,722 | INFO     | mean x: 1763724373.9154558
[2025-11-22 01:18:54] 2025-11-22 00:17:46,722 | INFO     | mean y: 2865030.453104359
[2025-11-22 01:18:54] 2025-11-22 00:17:46,722 | INFO     | intersect: -4196933570.170885
[2025-11-22 01:18:54] 2025-11-22 00:17:46,724 | INFO     | chi2: 15.810804564057314
[2025-11-22 01:18:54] 2025-11-22 00:17:46,726 | INFO     | sum of square deviations: 1065756404447.0836
[2025-11-22 01:18:54] 2025-11-22 00:17:46,868 | INFO     | sum of deviations: 3055292736469.2344
[2025-11-22 01:18:54] 2025-11-22 00:17:46,869 | INFO     | mean x: 1763724221.4102054
[2025-11-22 01:18:54] 2025-11-22 00:17:46,869 | INFO     | mean y: 2872092.673293572
[2025-11-22 01:18:54] 2025-11-22 00:17:46,869 | INFO     | intersect: -5053343174.083767
[2025-11-22 01:18:54] 2025-11-22 00:17:46,871 | INFO     | chi2: 12.716299918680905
[2025-11-22 01:18:54] 2025-11-22 00:17:46,871 | INFO     | current chi2=12.716299918680905 (change=19.572088395875458 %)
[2025-11-22 01:18:54] 2025-11-22 00:17:46,871 | INFO     | right removable region: 1508
[2025-11-22 01:18:54] 2025-11-22 00:17:46,873 | INFO     | sum of square deviations: 1065753711643.8224
[2025-11-22 01:18:54] 2025-11-22 00:17:46,937 | INFO     | sum of deviations: 2097562642966.5537
[2025-11-22 01:18:54] 2025-11-22 00:17:46,937 | INFO     | mean x: 1763724526.4400265
[2025-11-22 01:18:54] 2025-11-22 00:17:46,937 | INFO     | mean y: 2871707.315440689
[2025-11-22 01:18:54] 2025-11-22 00:17:46,937 | INFO     | intersect: -3468401851.2240067
[2025-11-22 01:18:54] 2025-11-22 00:17:46,939 | INFO     | chi2: 13.334602009505618
[2025-11-22 01:18:54] 2025-11-22 00:17:46,939 | INFO     | current chi2=13.334602009505618 (change=15.66145824217475 %)
[2025-11-22 01:18:54] 2025-11-22 00:17:46,939 | INFO     | left removable region: 10
[2025-11-22 01:18:54] 2025-11-22 00:17:46,941 | INFO     | sum of square deviations: 1042618819218.7283
[2025-11-22 01:18:54] 2025-11-22 00:17:47,001 | INFO     | sum of deviations: 2593294986163.8975
[2025-11-22 01:18:54] 2025-11-22 00:17:47,001 | INFO     | mean x: 1763724495.953271
[2025-11-22 01:18:54] 2025-11-22 00:17:47,001 | INFO     | mean y: 2882018.1128170895
[2025-11-22 01:18:54] 2025-11-22 00:17:47,001 | INFO     | intersect: -4384011646.205866
[2025-11-22 01:18:54] 2025-11-22 00:17:47,003 | INFO     | chi2: 9.383163407618051
[2025-11-22 01:18:54] 2025-11-22 00:17:47,004 | INFO     | current memory leak: 2.49 B/s (using 1498 data points, chi2=9.38)
[2025-11-22 01:18:54] 2025-11-22 00:17:47,006 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-22 01:18:54] 2025-11-22 00:17:47,006 | INFO     | ..............................
[2025-11-22 01:18:54] 2025-11-22 00:17:47,006 | INFO     | . Timing measurements:
[2025-11-22 01:18:54] 2025-11-22 00:17:47,006 | INFO     | . get job = 0 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,006 | INFO     | . initial setup = 8 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,007 | INFO     | . payload setup = 12 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,007 | INFO     | . stage-in = 0 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,007 | INFO     | . payload execution = 92362 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,007 | INFO     | . stage-out = 6 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,007 | INFO     | . log creation = 2 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,007 | INFO     | ..............................
[2025-11-22 01:18:54] 2025-11-22 00:17:47,125 | INFO     | 
[2025-11-22 01:18:54] 2025-11-22 00:17:47,126 | INFO     | job summary report
[2025-11-22 01:18:54] 2025-11-22 00:17:47,126 | INFO     | --------------------------------------------------
[2025-11-22 01:18:54] 2025-11-22 00:17:47,126 | INFO     | PanDA job id: 6891572163
[2025-11-22 01:18:54] 2025-11-22 00:17:47,126 | INFO     | task id: 47493068
[2025-11-22 01:18:54] 2025-11-22 00:17:47,126 | INFO     | errors: (none)
[2025-11-22 01:18:54] 2025-11-22 00:17:47,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 01:18:54] 2025-11-22 00:17:47,126 | INFO     | pilot state: finished 
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | transexitcode: 0
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | exeerrorcode: 0
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | exeerrordiag: 
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | exitcode: 0
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | exitmsg: OK
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | cpuconsumptiontime: 342472 s
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | nevents: 1000
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | neventsw: 0
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | pid: 22033
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | pgrp: 22033
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | corecount: 8
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | event service: False
[2025-11-22 01:18:54] 2025-11-22 00:17:47,127 | INFO     | sizes: {0: 2298563, 1: 2298818, 2: 2298818, 9: 2299108, 12: 2299136, 92378: 2362270, 92386: 2371264, 92388: 2371320, 92485: 2371566}
[2025-11-22 01:18:54] 2025-11-22 00:17:47,128 | INFO     | --------------------------------------------------
[2025-11-22 01:18:54] 2025-11-22 00:17:47,128 | INFO     | 
[2025-11-22 01:18:54] 2025-11-22 00:17:47,128 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-22 01:18:54] 2025-11-22 00:17:47,171 | INFO     | time since job start (92505s) is within the limit (172800.0s)
[2025-11-22 01:18:54] 2025-11-22 00:17:47,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,743 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | job 6891572163 has completed (purged errors)
[2025-11-22 01:18:54] 2025-11-22 00:17:47,745 | INFO     | overall cleanup function is called
[2025-11-22 01:18:54] 2025-11-22 00:17:48,772 | INFO     | --- collectZombieJob: --- 10, [22033]
[2025-11-22 01:18:54] 2025-11-22 00:17:48,772 | INFO     | zombie collector waiting for pid 22033
[2025-11-22 01:18:54] 2025-11-22 00:17:48,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 01:18:54] 2025-11-22 00:17:48,772 | INFO     | collected zombie processes
[2025-11-22 01:18:54] 2025-11-22 00:17:48,772 | INFO     | will attempt to kill all subprocesses of pid=22033
[2025-11-22 01:18:54] 2025-11-22 00:17:48,901 | INFO     | process IDs to be killed: [22033] (in reverse order)
[2025-11-22 01:18:54] 2025-11-22 00:17:49,739 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 01:18:54] 2025-11-22 00:17:49,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 01:18:54] 2025-11-22 00:17:49,743 | INFO     | did not find any defunct processes belonging to 22033
[2025-11-22 01:18:54] 2025-11-22 00:17:49,746 | INFO     | did not find any defunct processes belonging to 22033
[2025-11-22 01:18:54] 2025-11-22 00:17:49,786 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 01:18:54] 2025-11-22 00:17:49,786 | INFO     | ready for new job
[2025-11-22 01:18:54] 2025-11-22 00:17:49,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 01:18:54] 2025-11-22 00:17:49,793 | INFO     | ***************************************
[2025-11-22 01:18:54] 2025-11-22 00:17:49,793 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 01:18:54] 2025-11-22 00:17:49,793 | INFO     | ***************************************
[2025-11-22 01:18:54] 2025-11-22 00:17:49,793 | INFO     | 
[2025-11-22 01:18:54] 2025-11-22 00:17:49,794 | INFO     | pilot is running in a VM
[2025-11-22 01:18:54] 2025-11-22 00:17:49,794 | INFO     | architecture information:
[2025-11-22 01:18:54] 2025-11-22 00:17:49,798 | INFO     | executing command: cat /etc/os-release
[2025-11-22 01:18:54] 2025-11-22 00:17:50,001 | INFO     | cat /etc/os-release:
[2025-11-22 01:18:54] NAME="CentOS Linux"
[2025-11-22 01:18:54] VERSION="7 (Core)"
[2025-11-22 01:18:54] ID="centos"
[2025-11-22 01:18:54] ID_LIKE="rhel fedora"
[2025-11-22 01:18:54] VERSION_ID="7"
[2025-11-22 01:18:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 01:18:54] ANSI_COLOR="0;31"
[2025-11-22 01:18:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 01:18:54] HOME_URL="https://www.centos.org/"
[2025-11-22 01:18:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 01:18:54] 
[2025-11-22 01:18:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 01:18:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 01:18:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 01:18:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 01:18:54] 
[2025-11-22 01:18:54] 2025-11-22 00:17:50,002 | INFO     | ***************************************
[2025-11-22 01:18:54] 2025-11-22 00:17:50,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-22 01:18:54] 2025-11-22 00:17:50,615 | INFO     | sufficient remaining disk space (494967717888 B)
[2025-11-22 01:18:54] 2025-11-22 00:17:50,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 01:18:54] 2025-11-22 00:17:50,616 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 01:18:54] 2025-11-22 00:17:50,616 | INFO     | update_server=False
[2025-11-22 01:18:54] 2025-11-22 00:17:50,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 01:18:54] 2025-11-22 00:17:50,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 01:18:54] 2025-11-22 00:17:50,627 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 01:18:54] 2025-11-22 00:17:50,628 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 01:18:54] 2025-11-22 00:17:50,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:18:54] 2025-11-22 00:17:50,628 | INFO     | will abort loop
[2025-11-22 01:18:54] 2025-11-22 00:17:50,762 | INFO     | all job control threads have been joined
[2025-11-22 01:18:54] 2025-11-22 00:17:50,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 01:18:54] 2025-11-22 00:17:51,352 | INFO     | all payload control threads have been joined
[2025-11-22 01:18:54] 2025-11-22 00:17:51,423 | INFO     | all data control threads have been joined
[2025-11-22 01:18:54] 2025-11-22 00:17:51,623 | INFO     | [job] retrieve thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:51,632 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:51,634 | INFO     | [job] job monitor thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:51,769 | INFO     | [job] control thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,059 | INFO     | [payload] failed_post thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,059 | INFO     | [job] validate thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,099 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:18:54] 2025-11-22 00:17:52,255 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,272 | INFO     | [data] copytool_in thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,359 | INFO     | [payload] control thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,429 | INFO     | [data] control thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,625 | INFO     | [data] copytool_out thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:52,754 | INFO     | [payload] validate_post thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:53,150 | INFO     | [job] queue monitor thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:17:54,950 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 01:18:54] 2025-11-22 00:18:20,401 | INFO     | PID=15518 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:18:54] 2025-11-22 00:18:20,401 | INFO     | .. there are 9 such processes running
[2025-11-22 01:18:54] 2025-11-22 00:18:20,402 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 01:18:54] 2025-11-22 00:18:20,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 01:18:54] 2025-11-22 00:18:20,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 01:18:54] 2025-11-22 00:18:44,200 | INFO     | [monitor] cgroup control has ended
[2025-11-22 01:18:54] 2025-11-22 00:18:45,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139792112326464)>', '<ExcThread(monitor, started 139791823779584)>']
[2025-11-22 01:18:54] 2025-11-22 00:18:45,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 01:18:54] 2025-11-22 00:18:45,554 | INFO     | [monitor] control thread has ended
[2025-11-22 01:18:54] 2025-11-22 00:18:50,365 | INFO     | all workflow threads have been joined
[2025-11-22 01:18:54] 2025-11-22 00:18:50,366 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 01:18:54] 2025-11-22 00:18:50,366 | INFO     | traces error code: 0
[2025-11-22 01:18:54] 2025-11-22 00:18:50,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 01:18:54] 2025-11-22 00:18:50,842 [wrapper] ==== pilot stdout END ====
[2025-11-22 01:18:54] 2025-11-22 00:18:50,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 01:18:54] 2025-11-22 00:18:51,042 [wrapper] pilotpid: 15518
[2025-11-22 01:18:54] 2025-11-22 00:18:51,154 [wrapper] Pilot exit status: 0
[2025-11-22 01:18:54] 2025-11-22 00:18:51,594 [wrapper] pandaids: 6891572163
[2025-11-22 01:18:54] 2025-11-22 00:18:52,363 [wrapper] cleanup supervisor_pilot 24870 15519
[2025-11-22 01:18:54] 2025-11-22 00:18:52,445 [wrapper] Test setup, not cleaning
[2025-11-22 01:18:54] 2025-11-22 00:18:52,521 [wrapper] apfmon messages muted
[2025-11-22 01:18:54] 2025-11-22 00:18:52,600 [wrapper] ==== wrapper stdout END ====
[2025-11-22 01:18:54] 2025-11-22 00:18:52,648 [wrapper] ==== wrapper stderr END ====
[2025-11-22 01:18:54]  *** Error codes and diagnostics ***
[2025-11-22 01:18:54]     "exeErrorCode": 0,
[2025-11-22 01:18:54]     "exeErrorDiag": "",
[2025-11-22 01:18:54]     "pilotErrorCode": 0,
[2025-11-22 01:18:54]     "pilotErrorDiag": "",
[2025-11-22 01:18:54]  *** Listing of results directory ***
[2025-11-22 01:18:54] total 1347764
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-22 01:18:54] -rwx------. 1 boinc boinc     36292 Nov 18 17:18 runpilot2-wrapper.sh
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:18 queuedata.json
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc       100 Nov 20 23:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 01:18:54] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 23:35 run_atlas
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc       105 Nov 20 23:35 job.xml
[2025-11-22 01:18:54] -rw-r--r--. 2 boinc boinc 410658262 Nov 20 23:35 EVNT.47493065._000334.pool.root.1
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc      6388 Nov 20 23:35 init_data.xml
[2025-11-22 01:18:54] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:35 start_atlas.sh
[2025-11-22 01:18:54] drwxrwx--x. 2 boinc boinc        68 Nov 20 23:35 shared
[2025-11-22 01:18:54] -rw-r--r--. 2 boinc boinc    590095 Nov 20 23:35 input.tar.gz
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc         0 Nov 20 23:35 boinc_lockfile
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc      2770 Nov 20 23:35 pandaJob.out
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc    989825 Nov 20 23:35 agis_schedconf.cvmfs.json
[2025-11-22 01:18:54] drwx------. 5 boinc boinc      4096 Nov 20 23:36 pilot3
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc       533 Nov 22 00:51 boinc_task_state.xml
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc 935888494 Nov 22 01:14 HITS.47493068._003331.pool.root.1
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc      1031 Nov 22 01:15 memory_monitor_summary.json
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc   1526164 Nov 22 01:16 agis_ddmendpoints.agis.ALL.json
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc   2556711 Nov 22 01:16 log.47493068._003331.job.log.tgz.1
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc        95 Nov 22 01:17 pilot_heartbeat.json
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc      7949 Nov 22 01:17 heartbeat.json
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc        29 Nov 22 01:18 wrapper_checkpoint.txt
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc      8192 Nov 22 01:18 boinc_mmap_file
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc      5070 Nov 22 01:18 pilotlog.txt
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc  12269532 Nov 22 01:18 log.47493068._003331.job.log.1
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc       353 Nov 22 01:18 output.list
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc       620 Nov 22 01:18 runtime_log
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc  14848000 Nov 22 01:18 result.tar.gz
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc      8703 Nov 22 01:18 runtime_log.err
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc       662 Nov 22 01:18 honNDmiadf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBlFKDmeT3Tgn.diag
[2025-11-22 01:18:54] -rw-r--r--. 1 boinc boinc     21474 Nov 22 01:18 stderr.txt
[2025-11-22 01:18:54] HITS file was successfully produced:
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc 935888494 Nov 22 01:14 shared/HITS.pool.root.1
[2025-11-22 01:18:54]  *** Contents of shared directory: ***
[2025-11-22 01:18:54] total 1330088
[2025-11-22 01:18:54] -rw-r--r--. 2 boinc boinc 410658262 Nov 20 23:35 ATLAS.root_0
[2025-11-22 01:18:54] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:35 start_atlas.sh
[2025-11-22 01:18:54] -rw-r--r--. 2 boinc boinc    590095 Nov 20 23:35 input.tar.gz
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc 935888494 Nov 22 01:14 HITS.pool.root.1
[2025-11-22 01:18:54] -rw-------. 1 boinc boinc  14848000 Nov 22 01:18 result.tar.gz
01:18:56 (11787): run_atlas exited; CPU time 342967.192379
01:18:56 (11787): called boinc_finish(0)

</stderr_txt>
]]>

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