Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:18:21 (18432): wrapper (7.7.26015): starting
23:18:21 (18432): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:18:21] Arguments: --nthreads 8
[2025-11-20 23:18:21] Threads: 8
[2025-11-20 23:18:21] Checking for CVMFS
[2025-11-20 23:18:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:18:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:18:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:18:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:18:24] 2.11.2.0 32446 164125 141228 153088 2 313 19689319 25165824 4239 130560 2 56160226 99.903 24625732 2425 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 23:18:24] CVMFS is ok
[2025-11-20 23:18:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:18:24] Checking for apptainer binary...
[2025-11-20 23:18:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:18:24] Running /usr/bin/apptainer --version
[2025-11-20 23:18:24] apptainer version 1.3.2-1.el7
[2025-11-20 23:18:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:18:32] cg-vwn269.simple-grid.lan
[2025-11-20 23:18:32] apptainer works
[2025-11-20 23:18:32] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:18:32] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:18:32] Starting ATLAS job with PandaID=6891571907
[2025-11-20 23:18:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 01:38:39]  *** The last 200 lines of the pilot log: ***
[2025-11-22 01:38:39] 2025-11-22 00:37:54,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:38:39] 2025-11-22 00:37:56,189 | INFO     | time since job start (94528s) is within the limit (172800.0s)
[2025-11-22 01:38:39] 2025-11-22 00:37:57,281 | INFO     | monitor loop #6380: job 0:6891571907 is in state 'finished'
[2025-11-22 01:38:39] 2025-11-22 00:37:57,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:38:39] 2025-11-22 00:37:58,198 | INFO     | time since job start (94530s) is within the limit (172800.0s)
[2025-11-22 01:38:39] 2025-11-22 00:37:59,787 | INFO     | monitor loop #6381: job 0:6891571907 is in state 'finished'
[2025-11-22 01:38:39] 2025-11-22 00:37:59,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:38:39] 2025-11-22 00:38:00,205 | INFO     | time since job start (94532s) is within the limit (172800.0s)
[2025-11-22 01:38:39] 2025-11-22 00:38:01,428 | INFO     | PID=22225 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:38:39] 2025-11-22 00:38:01,428 | INFO     | .. there are 9 such processes running
[2025-11-22 01:38:39] 2025-11-22 00:38:02,293 | INFO     | monitor loop #6382: job 0:6891571907 is in state 'finished'
[2025-11-22 01:38:39] 2025-11-22 00:38:02,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:38:39] 2025-11-22 00:38:02,429 | INFO     | time since job start (94534s) is within the limit (172800.0s)
[2025-11-22 01:38:39] 2025-11-22 00:38:02,910 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 01:38:39] 2025-11-22 00:38:02,911 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 01:38:39] 2025-11-22 00:38:02,913 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891571907/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 01:38:39] 2025-11-22 00:38:02,914 | INFO     | extracted standard info from prmon json
[2025-11-22 01:38:39] 2025-11-22 00:38:02,914 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 01:38:39] 2025-11-22 00:38:02,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 01:38:39] 2025-11-22 00:38:02,954 | INFO     | fitting pss+swap vs Time
[2025-11-22 01:38:39] 2025-11-22 00:38:02,957 | INFO     | sum of square deviations: 1132504669904.5713
[2025-11-22 01:38:39] 2025-11-22 00:38:03,058 | INFO     | sum of deviations: 3364361429533.2964
[2025-11-22 01:38:39] 2025-11-22 00:38:03,059 | INFO     | mean x: 1763724839.857143
[2025-11-22 01:38:39] 2025-11-22 00:38:03,059 | INFO     | mean y: 2841352.9058441557
[2025-11-22 01:38:39] 2025-11-22 00:38:03,059 | INFO     | intersect: -5236702448.732665
[2025-11-22 01:38:39] 2025-11-22 00:38:03,061 | INFO     | chi2: 24.245750247175575
[2025-11-22 01:38:39] 2025-11-22 00:38:03,068 | INFO     | sum of square deviations: 1121510180260.3313
[2025-11-22 01:38:39] 2025-11-22 00:38:03,155 | INFO     | sum of deviations: 3894775766781.923
[2025-11-22 01:38:39] 2025-11-22 00:38:03,155 | INFO     | mean x: 1763724687.3615634
[2025-11-22 01:38:39] 2025-11-22 00:38:03,156 | INFO     | mean y: 2848708.117263844
[2025-11-22 01:38:39] 2025-11-22 00:38:03,156 | INFO     | intersect: -6122206857.598865
[2025-11-22 01:38:39] 2025-11-22 00:38:03,157 | INFO     | chi2: 20.75505412157511
[2025-11-22 01:38:39] 2025-11-22 00:38:03,158 | INFO     | current chi2=20.75505412157511 (change=14.397146262805794 %)
[2025-11-22 01:38:39] 2025-11-22 00:38:03,158 | INFO     | right removable region: 1534
[2025-11-22 01:38:39] 2025-11-22 00:38:03,160 | INFO     | sum of square deviations: 1121508905360.3315
[2025-11-22 01:38:39] 2025-11-22 00:38:03,257 | INFO     | sum of deviations: 2718528067804.004
[2025-11-22 01:38:39] 2025-11-22 00:38:03,257 | INFO     | mean x: 1763724992.3615634
[2025-11-22 01:38:39] 2025-11-22 00:38:03,258 | INFO     | mean y: 2850309.661237785
[2025-11-22 01:38:39] 2025-11-22 00:38:03,258 | INFO     | intersect: -4272404102.234675
[2025-11-22 01:38:39] 2025-11-22 00:38:03,264 | INFO     | chi2: 19.56972752339374
[2025-11-22 01:38:39] 2025-11-22 00:38:03,264 | INFO     | current chi2=19.56972752339374 (change=19.28594774800401 %)
[2025-11-22 01:38:39] 2025-11-22 00:38:03,264 | INFO     | left removable region: 10
[2025-11-22 01:38:39] 2025-11-22 00:38:03,271 | INFO     | sum of square deviations: 1097570742134.7928
[2025-11-22 01:38:39] 2025-11-22 00:38:03,359 | INFO     | sum of deviations: 2797027000166.551
[2025-11-22 01:38:39] 2025-11-22 00:38:03,359 | INFO     | mean x: 1763724961.871391
[2025-11-22 01:38:39] 2025-11-22 00:38:03,359 | INFO     | mean y: 2866915.9875328084
[2025-11-22 01:38:39] 2025-11-22 00:38:03,360 | INFO     | intersect: -4491773975.793961
[2025-11-22 01:38:39] 2025-11-22 00:38:03,361 | INFO     | chi2: 12.069939597832525
[2025-11-22 01:38:39] 2025-11-22 00:38:03,362 | INFO     | current memory leak: 2.55 B/s (using 1524 data points, chi2=12.07)
[2025-11-22 01:38:39] 2025-11-22 00:38:03,364 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-22 01:38:39] 2025-11-22 00:38:03,364 | INFO     | ..............................
[2025-11-22 01:38:39] 2025-11-22 00:38:03,364 | INFO     | . Timing measurements:
[2025-11-22 01:38:39] 2025-11-22 00:38:03,364 | INFO     | . get job = 0 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,364 | INFO     | . initial setup = 11 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,364 | INFO     | . payload setup = 183 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,364 | INFO     | . stage-in = 0 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,365 | INFO     | . payload execution = 94044 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,365 | INFO     | . stage-out = 6 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,365 | INFO     | . log creation = 2 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,365 | INFO     | ..............................
[2025-11-22 01:38:39] 2025-11-22 00:38:03,491 | INFO     | 
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | job summary report
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | --------------------------------------------------
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | PanDA job id: 6891571907
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | task id: 47493068
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | errors: (none)
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | pilot state: finished 
[2025-11-22 01:38:39] 2025-11-22 00:38:03,496 | INFO     | transexitcode: 0
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | exeerrorcode: 0
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | exeerrordiag: 
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | exitcode: 0
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | exitmsg: OK
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | cpuconsumptiontime: 338615 s
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | nevents: 1000
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | neventsw: 0
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | pid: 28824
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | pgrp: 28824
[2025-11-22 01:38:39] 2025-11-22 00:38:03,497 | INFO     | corecount: 8
[2025-11-22 01:38:39] 2025-11-22 00:38:03,498 | INFO     | event service: False
[2025-11-22 01:38:39] 2025-11-22 00:38:03,498 | INFO     | sizes: {0: 2298570, 1: 2298825, 2: 2298853, 13: 2298853, 23: 2298909, 34: 2298937, 45: 2299093, 56: 2299121, 66: 2299149, 77: 2299177, 88: 2299233, 99: 2299541, 10
[2025-11-22 01:38:39] 2025-11-22 00:38:03,498 | INFO     | --------------------------------------------------
[2025-11-22 01:38:39] 2025-11-22 00:38:03,498 | INFO     | 
[2025-11-22 01:38:39] 2025-11-22 00:38:03,498 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-22 01:38:39] 2025-11-22 00:38:04,040 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 01:38:39] 2025-11-22 00:38:04,042 | INFO     | job 6891571907 has completed (purged errors)
[2025-11-22 01:38:39] 2025-11-22 00:38:04,043 | INFO     | overall cleanup function is called
[2025-11-22 01:38:39] 2025-11-22 00:38:05,067 | INFO     | --- collectZombieJob: --- 10, [28824]
[2025-11-22 01:38:39] 2025-11-22 00:38:05,068 | INFO     | zombie collector waiting for pid 28824
[2025-11-22 01:38:39] 2025-11-22 00:38:05,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 01:38:39] 2025-11-22 00:38:05,068 | INFO     | collected zombie processes
[2025-11-22 01:38:39] 2025-11-22 00:38:05,068 | INFO     | will attempt to kill all subprocesses of pid=28824
[2025-11-22 01:38:39] 2025-11-22 00:38:05,179 | INFO     | process IDs to be killed: [28824] (in reverse order)
[2025-11-22 01:38:39] 2025-11-22 00:38:05,896 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 01:38:39] 2025-11-22 00:38:05,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 01:38:39] 2025-11-22 00:38:05,900 | INFO     | did not find any defunct processes belonging to 28824
[2025-11-22 01:38:39] 2025-11-22 00:38:05,903 | INFO     | did not find any defunct processes belonging to 28824
[2025-11-22 01:38:39] 2025-11-22 00:38:05,966 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 01:38:39] 2025-11-22 00:38:05,966 | INFO     | ready for new job
[2025-11-22 01:38:39] 2025-11-22 00:38:05,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 01:38:39] 2025-11-22 00:38:05,973 | INFO     | ***************************************
[2025-11-22 01:38:39] 2025-11-22 00:38:05,973 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 01:38:39] 2025-11-22 00:38:05,973 | INFO     | ***************************************
[2025-11-22 01:38:39] 2025-11-22 00:38:05,973 | INFO     | 
[2025-11-22 01:38:39] 2025-11-22 00:38:05,974 | INFO     | pilot is running in a VM
[2025-11-22 01:38:39] 2025-11-22 00:38:05,974 | INFO     | architecture information:
[2025-11-22 01:38:39] 2025-11-22 00:38:05,987 | INFO     | executing command: cat /etc/os-release
[2025-11-22 01:38:39] 2025-11-22 00:38:06,282 | INFO     | cat /etc/os-release:
[2025-11-22 01:38:39] NAME="CentOS Linux"
[2025-11-22 01:38:39] VERSION="7 (Core)"
[2025-11-22 01:38:39] ID="centos"
[2025-11-22 01:38:39] ID_LIKE="rhel fedora"
[2025-11-22 01:38:39] VERSION_ID="7"
[2025-11-22 01:38:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 01:38:39] ANSI_COLOR="0;31"
[2025-11-22 01:38:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 01:38:39] HOME_URL="https://www.centos.org/"
[2025-11-22 01:38:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 01:38:39] 
[2025-11-22 01:38:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 01:38:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 01:38:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 01:38:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 01:38:39] 
[2025-11-22 01:38:39] 2025-11-22 00:38:06,283 | INFO     | ***************************************
[2025-11-22 01:38:39] 2025-11-22 00:38:06,787 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-22 01:38:39] 2025-11-22 00:38:06,979 | INFO     | sufficient remaining disk space (495147024384 B)
[2025-11-22 01:38:39] 2025-11-22 00:38:06,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 01:38:39] 2025-11-22 00:38:06,980 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 01:38:39] 2025-11-22 00:38:06,980 | INFO     | update_server=False
[2025-11-22 01:38:39] 2025-11-22 00:38:06,980 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 01:38:39] 2025-11-22 00:38:06,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 01:38:39] 2025-11-22 00:38:07,309 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 01:38:39] 2025-11-22 00:38:07,310 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 01:38:39] 2025-11-22 00:38:07,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:38:39] 2025-11-22 00:38:07,310 | INFO     | will abort loop
[2025-11-22 01:38:39] 2025-11-22 00:38:07,902 | INFO     | all job control threads have been joined
[2025-11-22 01:38:39] 2025-11-22 00:38:07,937 | INFO     | all payload control threads have been joined
[2025-11-22 01:38:39] 2025-11-22 00:38:07,986 | INFO     | [job] retrieve thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:07,987 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,027 | INFO     | all data control threads have been joined
[2025-11-22 01:38:39] 2025-11-22 00:38:08,098 | INFO     | [data] copytool_in thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,316 | INFO     | [job] job monitor thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,332 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:38:39] 2025-11-22 00:38:08,721 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 01:38:39] 2025-11-22 00:38:08,909 | INFO     | [job] control thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,944 | INFO     | [payload] control thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,945 | INFO     | [payload] failed_post thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,969 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:08,988 | INFO     | [data] copytool_out thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:09,034 | INFO     | [data] control thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:09,061 | INFO     | [job] validate thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:09,505 | INFO     | [payload] validate_post thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:09,512 | INFO     | [job] queue monitor thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:12,473 | INFO     | [monitor] cgroup control has ended
[2025-11-22 01:38:39] 2025-11-22 00:38:12,872 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 01:38:39] 2025-11-22 00:38:14,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229539940160)>', '<ExcThread(monitor, started 140229222569728)>']
[2025-11-22 01:38:39] 2025-11-22 00:38:19,595 | INFO     | all workflow threads have been joined
[2025-11-22 01:38:39] 2025-11-22 00:38:19,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 01:38:39] 2025-11-22 00:38:19,596 | INFO     | traces error code: 0
[2025-11-22 01:38:39] 2025-11-22 00:38:19,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 01:38:39] 2025-11-22 00:38:19,749 [wrapper] supervise_pilot (15 min periods counter: 106)
[2025-11-22 01:38:39] 2025-11-22 00:38:35,600 | INFO     | PID=22225 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:38:39] 2025-11-22 00:38:35,601 | INFO     | .. there are 9 such processes running
[2025-11-22 01:38:39] 2025-11-22 00:38:35,601 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 01:38:39] 2025-11-22 00:38:35,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 01:38:39] 2025-11-22 00:38:35,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 01:38:39] 2025-11-22 00:38:35,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 01:38:39] 2025-11-22 00:38:35,602 | INFO     | [monitor] control thread has ended
[2025-11-22 01:38:39] 2025-11-22 00:38:36,100 [wrapper] ==== pilot stdout END ====
[2025-11-22 01:38:39] 2025-11-22 00:38:36,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 01:38:39] 2025-11-22 00:38:36,327 [wrapper] pilotpid: 22225
[2025-11-22 01:38:39] 2025-11-22 00:38:36,444 [wrapper] Pilot exit status: 0
[2025-11-22 01:38:39] 2025-11-22 00:38:36,857 [wrapper] pandaids: 6891571907
[2025-11-22 01:38:39] 2025-11-22 00:38:37,504 [wrapper] cleanup supervisor_pilot 31486 22226
[2025-11-22 01:38:39] 2025-11-22 00:38:37,557 [wrapper] Test setup, not cleaning
[2025-11-22 01:38:39] 2025-11-22 00:38:37,581 [wrapper] apfmon messages muted
[2025-11-22 01:38:39] 2025-11-22 00:38:37,642 [wrapper] ==== wrapper stdout END ====
[2025-11-22 01:38:39] 2025-11-22 00:38:37,703 [wrapper] ==== wrapper stderr END ====
[2025-11-22 01:38:39]  *** Error codes and diagnostics ***
[2025-11-22 01:38:39]     "exeErrorCode": 0,
[2025-11-22 01:38:39]     "exeErrorDiag": "",
[2025-11-22 01:38:39]     "pilotErrorCode": 0,
[2025-11-22 01:38:39]     "pilotErrorDiag": "",
[2025-11-22 01:38:39]  *** Listing of results directory ***
[2025-11-22 01:38:39] total 1331948
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-22 01:38:39] -rwx------. 1 boinc boinc     36292 Nov 18 17:05 runpilot2-wrapper.sh
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:05 queuedata.json
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc       100 Nov 20 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 01:38:39] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 23:18 run_atlas
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc       105 Nov 20 23:18 job.xml
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc      6391 Nov 20 23:18 init_data.xml
[2025-11-22 01:38:39] -rw-r--r--. 2 boinc boinc 408161006 Nov 20 23:18 EVNT.47493065._000310.pool.root.1
[2025-11-22 01:38:39] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:18 start_atlas.sh
[2025-11-22 01:38:39] drwxrwx--x. 2 boinc boinc        68 Nov 20 23:18 shared
[2025-11-22 01:38:39] -rw-r--r--. 2 boinc boinc    590097 Nov 20 23:18 input.tar.gz
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc         0 Nov 20 23:18 boinc_lockfile
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc      2773 Nov 20 23:18 pandaJob.out
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc    989440 Nov 20 23:22 agis_schedconf.cvmfs.json
[2025-11-22 01:38:39] drwx------. 5 boinc boinc      4096 Nov 20 23:22 pilot3
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc       533 Nov 22 01:06 boinc_task_state.xml
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc 921413148 Nov 22 01:34 HITS.47493068._003099.pool.root.1
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc      1034 Nov 22 01:36 memory_monitor_summary.json
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc   1526164 Nov 22 01:36 agis_ddmendpoints.agis.ALL.json
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc   2604447 Nov 22 01:36 log.47493068._003099.job.log.tgz.1
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc        95 Nov 22 01:37 pilot_heartbeat.json
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc      8631 Nov 22 01:38 heartbeat.json
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc       820 Nov 22 01:38 pilotlog.txt
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc      8192 Nov 22 01:38 boinc_mmap_file
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc  12613845 Nov 22 01:38 log.47493068._003099.job.log.1
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc        29 Nov 22 01:38 wrapper_checkpoint.txt
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc       353 Nov 22 01:38 output.list
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc       620 Nov 22 01:38 runtime_log
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc  15237120 Nov 22 01:38 result.tar.gz
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc       662 Nov 22 01:38 WX8LDmSOdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9RFKDmReKFRn.diag
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc      8717 Nov 22 01:38 runtime_log.err
[2025-11-22 01:38:39] -rw-r--r--. 1 boinc boinc     21479 Nov 22 01:38 stderr.txt
[2025-11-22 01:38:39] HITS file was successfully produced:
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc 921413148 Nov 22 01:34 shared/HITS.pool.root.1
[2025-11-22 01:38:39]  *** Contents of shared directory: ***
[2025-11-22 01:38:39] total 1313892
[2025-11-22 01:38:39] -rw-r--r--. 2 boinc boinc 408161006 Nov 20 23:18 ATLAS.root_0
[2025-11-22 01:38:39] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:18 start_atlas.sh
[2025-11-22 01:38:39] -rw-r--r--. 2 boinc boinc    590097 Nov 20 23:18 input.tar.gz
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc 921413148 Nov 22 01:34 HITS.pool.root.1
[2025-11-22 01:38:39] -rw-------. 1 boinc boinc  15237120 Nov 22 01:38 result.tar.gz
01:38:41 (18432): run_atlas exited; CPU time 339127.427573
01:38:41 (18432): called boinc_finish(0)

</stderr_txt>
]]>

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