Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:35:22 (10691): wrapper (7.7.26015): starting
23:35:22 (10691): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:35:22] Arguments: --nthreads 8
[2025-11-20 23:35:22] Threads: 8
[2025-11-20 23:35:22] Checking for CVMFS
[2025-11-20 23:35:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:35:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:35:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:35:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:35:24] 2.11.2.0 14372 277163 140160 153098 0 283 21039978 25165825 4608 130560 2 134545497 99.884 77907638 3193 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 23:35:24] CVMFS is ok
[2025-11-20 23:35:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:35:24] Checking for apptainer binary...
[2025-11-20 23:35:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:35:24] Running /usr/bin/apptainer --version
[2025-11-20 23:35:25] apptainer version 1.3.2-1.el7
[2025-11-20 23:35:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:35:37] cg-vwn440.simple-grid.lan
[2025-11-20 23:35:37] apptainer works
[2025-11-20 23:35:37] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:35:37] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:35:37] Starting ATLAS job with PandaID=6891571620
[2025-11-20 23:35:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 01:10:28]  *** The last 200 lines of the pilot log: ***
[2025-11-22 01:10:28] 2025-11-22 00:09:04,669 | INFO     | time since job start (91766s) is within the limit (172800.0s)
[2025-11-22 01:10:28] 2025-11-22 00:09:04,855 | INFO     | monitor loop #6182: job 0:6891571620 is in state 'finished'
[2025-11-22 01:10:28] 2025-11-22 00:09:04,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:10:28] 2025-11-22 00:09:06,680 | INFO     | time since job start (91768s) is within the limit (172800.0s)
[2025-11-22 01:10:28] 2025-11-22 00:09:07,363 | INFO     | monitor loop #6183: job 0:6891571620 is in state 'finished'
[2025-11-22 01:10:28] 2025-11-22 00:09:07,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:10:28] 2025-11-22 00:09:07,911 | INFO     | PID=14476 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:10:28] 2025-11-22 00:09:07,912 | INFO     | .. there are 9 such processes running
[2025-11-22 01:10:28] 2025-11-22 00:09:08,912 | INFO     | time since job start (91770s) is within the limit (172800.0s)
[2025-11-22 01:10:28] 2025-11-22 00:09:09,876 | INFO     | monitor loop #6184: job 0:6891571620 is in state 'finished'
[2025-11-22 01:10:28] 2025-11-22 00:09:09,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:10:28] 2025-11-22 00:09:10,925 | INFO     | time since job start (91772s) is within the limit (172800.0s)
[2025-11-22 01:10:28] 2025-11-22 00:09:12,389 | INFO     | monitor loop #6185: job 0:6891571620 is in state 'finished'
[2025-11-22 01:10:28] 2025-11-22 00:09:12,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:10:28] 2025-11-22 00:09:12,932 | INFO     | time since job start (91774s) is within the limit (172800.0s)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,413 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 01:10:28] 2025-11-22 00:09:14,414 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 01:10:28] 2025-11-22 00:09:14,416 | INFO     | using path: /var/lib/boinc/slots/31/PanDA_Pilot-6891571620/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,417 | INFO     | extracted standard info from prmon json
[2025-11-22 01:10:28] 2025-11-22 00:09:14,417 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 01:10:28] 2025-11-22 00:09:14,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 01:10:28] 2025-11-22 00:09:14,453 | INFO     | fitting pss+swap vs Time
[2025-11-22 01:10:28] 2025-11-22 00:09:14,455 | INFO     | sum of square deviations: 1036100093493.9365
[2025-11-22 01:10:28] 2025-11-22 00:09:14,543 | INFO     | sum of deviations: 3588836247613.4077
[2025-11-22 01:10:28] 2025-11-22 00:09:14,543 | INFO     | mean x: 1763724458.1418061
[2025-11-22 01:10:28] 2025-11-22 00:09:14,543 | INFO     | mean y: 2840032.7150501674
[2025-11-22 01:10:28] 2025-11-22 00:09:14,543 | INFO     | intersect: -6106336393.31591
[2025-11-22 01:10:28] 2025-11-22 00:09:14,545 | INFO     | chi2: 27.519880406136107
[2025-11-22 01:10:28] 2025-11-22 00:09:14,547 | INFO     | sum of square deviations: 1025739684974.8961
[2025-11-22 01:10:28] 2025-11-22 00:09:14,626 | INFO     | sum of deviations: 4070000008473.4106
[2025-11-22 01:10:28] 2025-11-22 00:09:14,627 | INFO     | mean x: 1763724305.6456375
[2025-11-22 01:10:28] 2025-11-22 00:09:14,627 | INFO     | mean y: 2847113.86442953
[2025-11-22 01:10:28] 2025-11-22 00:09:14,627 | INFO     | intersect: -6995378697.295629
[2025-11-22 01:10:28] 2025-11-22 00:09:14,629 | INFO     | chi2: 24.42725784695748
[2025-11-22 01:10:28] 2025-11-22 00:09:14,629 | INFO     | current chi2=24.42725784695748 (change=11.237776158682228 %)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,629 | INFO     | right removable region: 1489
[2025-11-22 01:10:28] 2025-11-22 00:09:14,631 | INFO     | sum of square deviations: 1025738643704.897
[2025-11-22 01:10:28] 2025-11-22 00:09:14,729 | INFO     | sum of deviations: 2959099714857.3994
[2025-11-22 01:10:28] 2025-11-22 00:09:14,730 | INFO     | mean x: 1763724610.6456375
[2025-11-22 01:10:28] 2025-11-22 00:09:14,730 | INFO     | mean y: 2849300.9382550335
[2025-11-22 01:10:28] 2025-11-22 00:09:14,730 | INFO     | intersect: -5085227495.698442
[2025-11-22 01:10:28] 2025-11-22 00:09:14,732 | INFO     | chi2: 22.76135771712918
[2025-11-22 01:10:28] 2025-11-22 00:09:14,732 | INFO     | current chi2=22.76135771712918 (change=17.2912186346054 %)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,732 | INFO     | left removable region: 10
[2025-11-22 01:10:28] 2025-11-22 00:09:14,735 | INFO     | sum of square deviations: 1003188325004.8523
[2025-11-22 01:10:28] 2025-11-22 00:09:14,797 | INFO     | sum of deviations: 3006028570109.1387
[2025-11-22 01:10:28] 2025-11-22 00:09:14,797 | INFO     | mean x: 1763724580.154158
[2025-11-22 01:10:28] 2025-11-22 00:09:14,798 | INFO     | mean y: 2866068.0432724813
[2025-11-22 01:10:28] 2025-11-22 00:09:14,798 | INFO     | intersect: -5282090251.321291
[2025-11-22 01:10:28] 2025-11-22 00:09:14,800 | INFO     | chi2: 15.501069215479028
[2025-11-22 01:10:28] 2025-11-22 00:09:14,800 | INFO     | current memory leak: 3.00 B/s (using 1479 data points, chi2=15.50)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,802 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,802 | INFO     | ..............................
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . Timing measurements:
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . get job = 0 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . initial setup = 6 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . payload setup = 176 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . stage-in = 0 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . payload execution = 91303 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . stage-out = 6 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | . log creation = 2 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,803 | INFO     | ..............................
[2025-11-22 01:10:28] 2025-11-22 00:09:14,947 | INFO     | time since job start (91776s) is within the limit (172800.0s)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,965 | INFO     | 
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | job summary report
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | --------------------------------------------------
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | PanDA job id: 6891571620
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | task id: 47493068
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | errors: (none)
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | pilot state: finished 
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | transexitcode: 0
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | exeerrorcode: 0
[2025-11-22 01:10:28] 2025-11-22 00:09:14,966 | INFO     | exeerrordiag: 
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | exitcode: 0
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | exitmsg: OK
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | cpuconsumptiontime: 338786 s
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | nevents: 1000
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | neventsw: 0
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | pid: 21056
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | pgrp: 21056
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | corecount: 8
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | event service: False
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | sizes: {0: 2298626, 1: 2298825, 12: 2298825, 23: 2298853, 33: 2298881, 44: 2298937, 55: 2299093, 66: 2299121, 76: 2299149, 87: 2299205, 89: 2299495, 98: 2299803, 9
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | --------------------------------------------------
[2025-11-22 01:10:28] 2025-11-22 00:09:14,967 | INFO     | 
[2025-11-22 01:10:28] 2025-11-22 00:09:14,968 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-11-22 01:10:28] 2025-11-22 00:09:15,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | job 6891571620 has completed (purged errors)
[2025-11-22 01:10:28] 2025-11-22 00:09:15,430 | INFO     | overall cleanup function is called
[2025-11-22 01:10:28] 2025-11-22 00:09:16,455 | INFO     | --- collectZombieJob: --- 10, [21056]
[2025-11-22 01:10:28] 2025-11-22 00:09:16,456 | INFO     | zombie collector waiting for pid 21056
[2025-11-22 01:10:28] 2025-11-22 00:09:16,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 01:10:28] 2025-11-22 00:09:16,456 | INFO     | collected zombie processes
[2025-11-22 01:10:28] 2025-11-22 00:09:16,456 | INFO     | will attempt to kill all subprocesses of pid=21056
[2025-11-22 01:10:28] 2025-11-22 00:09:16,571 | INFO     | process IDs to be killed: [21056] (in reverse order)
[2025-11-22 01:10:28] 2025-11-22 00:09:17,249 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 01:10:28] 2025-11-22 00:09:17,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 01:10:28] 2025-11-22 00:09:17,253 | INFO     | did not find any defunct processes belonging to 21056
[2025-11-22 01:10:28] 2025-11-22 00:09:17,256 | INFO     | did not find any defunct processes belonging to 21056
[2025-11-22 01:10:28] 2025-11-22 00:09:17,304 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 01:10:28] 2025-11-22 00:09:17,304 | INFO     | ready for new job
[2025-11-22 01:10:28] 2025-11-22 00:09:17,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 01:10:28] 2025-11-22 00:09:17,313 | INFO     | ***************************************
[2025-11-22 01:10:28] 2025-11-22 00:09:17,313 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 01:10:28] 2025-11-22 00:09:17,313 | INFO     | ***************************************
[2025-11-22 01:10:28] 2025-11-22 00:09:17,313 | INFO     | 
[2025-11-22 01:10:28] 2025-11-22 00:09:17,314 | INFO     | pilot is running in a VM
[2025-11-22 01:10:28] 2025-11-22 00:09:17,314 | INFO     | architecture information:
[2025-11-22 01:10:28] 2025-11-22 00:09:17,318 | INFO     | executing command: cat /etc/os-release
[2025-11-22 01:10:28] 2025-11-22 00:09:17,550 | INFO     | cat /etc/os-release:
[2025-11-22 01:10:28] NAME="CentOS Linux"
[2025-11-22 01:10:28] VERSION="7 (Core)"
[2025-11-22 01:10:28] ID="centos"
[2025-11-22 01:10:28] ID_LIKE="rhel fedora"
[2025-11-22 01:10:28] VERSION_ID="7"
[2025-11-22 01:10:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 01:10:28] ANSI_COLOR="0;31"
[2025-11-22 01:10:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 01:10:28] HOME_URL="https://www.centos.org/"
[2025-11-22 01:10:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 01:10:28] 
[2025-11-22 01:10:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 01:10:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 01:10:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 01:10:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 01:10:28] 
[2025-11-22 01:10:28] 2025-11-22 00:09:17,550 | INFO     | ***************************************
[2025-11-22 01:10:28] 2025-11-22 00:09:18,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-11-22 01:10:28] 2025-11-22 00:09:18,318 | INFO     | sufficient remaining disk space (494793654272 B)
[2025-11-22 01:10:28] 2025-11-22 00:09:18,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 01:10:28] 2025-11-22 00:09:18,319 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 01:10:28] 2025-11-22 00:09:18,319 | INFO     | update_server=False
[2025-11-22 01:10:28] 2025-11-22 00:09:18,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 01:10:28] 2025-11-22 00:09:18,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 01:10:28] 2025-11-22 00:09:18,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:10:28] 2025-11-22 00:09:18,406 | INFO     | aborting loop
[2025-11-22 01:10:28] 2025-11-22 00:09:18,580 | INFO     | all job control threads have been joined
[2025-11-22 01:10:28] 2025-11-22 00:09:18,668 | INFO     | all data control threads have been joined
[2025-11-22 01:10:28] 2025-11-22 00:09:18,669 | INFO     | all payload control threads have been joined
[2025-11-22 01:10:28] 2025-11-22 00:09:19,326 | INFO     | [job] retrieve thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,411 | INFO     | [job] job monitor thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,586 | INFO     | [job] control thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,660 | INFO     | [job] validate thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,674 | INFO     | [data] control thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,675 | INFO     | [payload] control thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,681 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 01:10:28] 2025-11-22 00:09:19,789 | INFO     | [payload] validate_post thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:19,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:10:28] 2025-11-22 00:09:20,165 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:20,371 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:20,380 | INFO     | [data] copytool_out thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:20,389 | INFO     | [data] copytool_in thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:20,832 | INFO     | [payload] failed_post thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:20,985 | INFO     | [job] queue monitor thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:23,729 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 01:10:28] 2025-11-22 00:09:48,164 | INFO     | PID=14476 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:10:28] 2025-11-22 00:09:48,165 | INFO     | .. there are 9 such processes running
[2025-11-22 01:10:28] 2025-11-22 00:09:48,166 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 01:10:28] 2025-11-22 00:09:48,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 01:10:28] 2025-11-22 00:09:48,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 01:10:28] 2025-11-22 00:10:18,227 | INFO     | [monitor] cgroup control has ended
[2025-11-22 01:10:28] 2025-11-22 00:10:19,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680863717184)>', '<ExcThread(monitor, started 140680403855104)>']
[2025-11-22 01:10:28] 2025-11-22 00:10:19,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 01:10:28] 2025-11-22 00:10:19,352 | INFO     | [monitor] control thread has ended
[2025-11-22 01:10:28] 2025-11-22 00:10:24,138 | INFO     | all workflow threads have been joined
[2025-11-22 01:10:28] 2025-11-22 00:10:24,139 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 01:10:28] 2025-11-22 00:10:24,139 | INFO     | traces error code: 0
[2025-11-22 01:10:28] 2025-11-22 00:10:24,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 01:10:28] 2025-11-22 00:10:24,664 [wrapper] ==== pilot stdout END ====
[2025-11-22 01:10:28] 2025-11-22 00:10:24,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 01:10:28] 2025-11-22 00:10:24,841 [wrapper] pilotpid: 14476
[2025-11-22 01:10:28] 2025-11-22 00:10:24,936 [wrapper] Pilot exit status: 0
[2025-11-22 01:10:28] 2025-11-22 00:10:25,335 [wrapper] pandaids: 6891571620
[2025-11-22 01:10:28] 2025-11-22 00:10:25,906 [wrapper] cleanup supervisor_pilot 23154 14477
[2025-11-22 01:10:28] 2025-11-22 00:10:25,938 [wrapper] Test setup, not cleaning
[2025-11-22 01:10:28] 2025-11-22 00:10:25,965 [wrapper] apfmon messages muted
[2025-11-22 01:10:28] 2025-11-22 00:10:26,019 [wrapper] ==== wrapper stdout END ====
[2025-11-22 01:10:28] 2025-11-22 00:10:26,053 [wrapper] ==== wrapper stderr END ====
[2025-11-22 01:10:28]  *** Error codes and diagnostics ***
[2025-11-22 01:10:28]     "exeErrorCode": 0,
[2025-11-22 01:10:28]     "exeErrorDiag": "",
[2025-11-22 01:10:28]     "pilotErrorCode": 0,
[2025-11-22 01:10:28]     "pilotErrorDiag": "",
[2025-11-22 01:10:28]  *** Listing of results directory ***
[2025-11-22 01:10:28] total 1334720
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:54 queuedata.json
[2025-11-22 01:10:28] -rwx------. 1 boinc boinc     36292 Nov 18 16:56 runpilot2-wrapper.sh
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc       100 Nov 20 23:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 01:10:28] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 23:35 run_atlas
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc       105 Nov 20 23:35 job.xml
[2025-11-22 01:10:28] -rw-r--r--. 2 boinc boinc 409134933 Nov 20 23:35 EVNT.47493065._000291.pool.root.1
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc      6392 Nov 20 23:35 init_data.xml
[2025-11-22 01:10:28] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:35 start_atlas.sh
[2025-11-22 01:10:28] drwxrwx--x. 2 boinc boinc        68 Nov 20 23:35 shared
[2025-11-22 01:10:28] -rw-r--r--. 2 boinc boinc    590102 Nov 20 23:35 input.tar.gz
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc         0 Nov 20 23:35 boinc_lockfile
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc      2773 Nov 20 23:35 pandaJob.out
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc    989825 Nov 20 23:39 agis_schedconf.cvmfs.json
[2025-11-22 01:10:28] drwx------. 5 boinc boinc      4096 Nov 20 23:39 pilot3
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc       533 Nov 22 00:39 boinc_task_state.xml
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc 924099167 Nov 22 01:06 HITS.47493068._002903.pool.root.1
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc      1033 Nov 22 01:07 memory_monitor_summary.json
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc   1526164 Nov 22 01:07 agis_ddmendpoints.agis.ALL.json
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc   2567127 Nov 22 01:07 log.47493068._002903.job.log.tgz.1
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc      7953 Nov 22 01:09 heartbeat.json
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc        95 Nov 22 01:09 pilot_heartbeat.json
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc      8192 Nov 22 01:10 boinc_mmap_file
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc        29 Nov 22 01:10 wrapper_checkpoint.txt
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc      4885 Nov 22 01:10 pilotlog.txt
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc  12237908 Nov 22 01:10 log.47493068._002903.job.log.1
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc       353 Nov 22 01:10 output.list
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc       620 Nov 22 01:10 runtime_log
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc  14827520 Nov 22 01:10 result.tar.gz
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc      8717 Nov 22 01:10 runtime_log.err
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc       662 Nov 22 01:10 H8CMDmXFdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCQFKDmlU9mSo.diag
[2025-11-22 01:10:28] -rw-r--r--. 1 boinc boinc     21509 Nov 22 01:10 stderr.txt
[2025-11-22 01:10:28] HITS file was successfully produced:
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc 924099167 Nov 22 01:06 shared/HITS.pool.root.1
[2025-11-22 01:10:28]  *** Contents of shared directory: ***
[2025-11-22 01:10:28] total 1317068
[2025-11-22 01:10:28] -rw-r--r--. 2 boinc boinc 409134933 Nov 20 23:35 ATLAS.root_0
[2025-11-22 01:10:28] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:35 start_atlas.sh
[2025-11-22 01:10:28] -rw-r--r--. 2 boinc boinc    590102 Nov 20 23:35 input.tar.gz
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc 924099167 Nov 22 01:06 HITS.pool.root.1
[2025-11-22 01:10:28] -rw-------. 1 boinc boinc  14827520 Nov 22 01:10 result.tar.gz
01:10:30 (10691): run_atlas exited; CPU time 339393.472202
01:10:30 (10691): called boinc_finish(0)

</stderr_txt>
]]>

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