Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:46:08 (10055): wrapper (7.7.26015): starting
23:46:08 (10055): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:46:08] Arguments: --nthreads 8
[2025-11-21 23:46:08] Threads: 8
[2025-11-21 23:46:08] Checking for CVMFS
[2025-11-21 23:46:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:46:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:46:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:46:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:46:10] 2.11.2.0 17769 278608 142008 153147 1 217 14833499 25165824 4586 130560 2 131770190 99.882 78771878 2919 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 23:46:10] CVMFS is ok
[2025-11-21 23:46:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:46:10] Checking for apptainer binary...
[2025-11-21 23:46:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:46:10] Running /usr/bin/apptainer --version
[2025-11-21 23:46:10] apptainer version 1.3.2-1.el7
[2025-11-21 23:46:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:46:29] cg-vwn290.simple-grid.lan
[2025-11-21 23:46:29] apptainer works
[2025-11-21 23:46:29] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:46:29] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:46:29] Starting ATLAS job with PandaID=6891589258
[2025-11-21 23:46:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:12:04]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:12:04] 2025-11-23 00:10:52,116 | INFO     | monitor loop #6093: job 0:6891589258 is in state 'finished'
[2025-11-23 01:12:04] 2025-11-23 00:10:52,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:04] 2025-11-23 00:10:52,524 | INFO     | time since job start (91233s) is within the limit (172800.0s)
[2025-11-23 01:12:04] 2025-11-23 00:10:53,683 | INFO     | PID=13803 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 01:12:04] 2025-11-23 00:10:53,684 | INFO     | .. there are 9 such processes running
[2025-11-23 01:12:04] 2025-11-23 00:10:54,621 | INFO     | monitor loop #6094: job 0:6891589258 is in state 'finished'
[2025-11-23 01:12:04] 2025-11-23 00:10:54,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:04] 2025-11-23 00:10:54,685 | INFO     | time since job start (91235s) is within the limit (172800.0s)
[2025-11-23 01:12:04] 2025-11-23 00:10:56,691 | INFO     | time since job start (91237s) is within the limit (172800.0s)
[2025-11-23 01:12:04] 2025-11-23 00:10:57,126 | INFO     | monitor loop #6095: job 0:6891589258 is in state 'finished'
[2025-11-23 01:12:04] 2025-11-23 00:10:57,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:04] 2025-11-23 00:10:58,701 | INFO     | time since job start (91239s) is within the limit (172800.0s)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,387 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:12:04] 2025-11-23 00:10:59,389 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 01:12:04] 2025-11-23 00:10:59,390 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891589258/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,391 | INFO     | extracted standard info from prmon json
[2025-11-23 01:12:04] 2025-11-23 00:10:59,391 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:12:04] 2025-11-23 00:10:59,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:12:04] 2025-11-23 00:10:59,419 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:12:04] 2025-11-23 00:10:59,422 | INFO     | sum of square deviations: 1021613522243.6537
[2025-11-23 01:12:04] 2025-11-23 00:10:59,493 | INFO     | sum of deviations: 4171415184432.819
[2025-11-23 01:12:04] 2025-11-23 00:10:59,494 | INFO     | mean x: 1763811269.6330645
[2025-11-23 01:12:04] 2025-11-23 00:10:59,494 | INFO     | mean y: 2834869.4630376343
[2025-11-23 01:12:04] 2025-11-23 00:10:59,494 | INFO     | intersect: -7199095168.094079
[2025-11-23 01:12:04] 2025-11-23 00:10:59,496 | INFO     | chi2: 26.499959779414027
[2025-11-23 01:12:04] 2025-11-23 00:10:59,498 | INFO     | sum of square deviations: 1011350067277.2108
[2025-11-23 01:12:04] 2025-11-23 00:10:59,559 | INFO     | sum of deviations: 4658445396093.305
[2025-11-23 01:12:04] 2025-11-23 00:10:59,559 | INFO     | mean x: 1763811117.1368847
[2025-11-23 01:12:04] 2025-11-23 00:10:59,559 | INFO     | mean y: 2842105.0182063384
[2025-11-23 01:12:04] 2025-11-23 00:10:59,559 | INFO     | intersect: -8121563127.213153
[2025-11-23 01:12:04] 2025-11-23 00:10:59,561 | INFO     | chi2: 23.326366510438834
[2025-11-23 01:12:04] 2025-11-23 00:10:59,561 | INFO     | current chi2=23.326366510438834 (change=11.975841832939446 %)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,561 | INFO     | right removable region: 1482
[2025-11-23 01:12:04] 2025-11-23 00:10:59,563 | INFO     | sum of square deviations: 1011349038817.2107
[2025-11-23 01:12:04] 2025-11-23 00:10:59,624 | INFO     | sum of deviations: 3538789197214.6733
[2025-11-23 01:12:04] 2025-11-23 00:10:59,624 | INFO     | mean x: 1763811422.1368847
[2025-11-23 01:12:04] 2025-11-23 00:10:59,625 | INFO     | mean y: 2844268.3020903575
[2025-11-23 01:12:04] 2025-11-23 00:10:59,625 | INFO     | intersect: -6168869518.939646
[2025-11-23 01:12:04] 2025-11-23 00:10:59,626 | INFO     | chi2: 21.602732058351393
[2025-11-23 01:12:04] 2025-11-23 00:10:59,627 | INFO     | current chi2=21.602732058351393 (change=18.48013265615199 %)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,627 | INFO     | left removable region: 10
[2025-11-23 01:12:04] 2025-11-23 00:10:59,629 | INFO     | sum of square deviations: 989010884674.8881
[2025-11-23 01:12:04] 2025-11-23 00:10:59,637 | INFO     | monitor loop #6096: job 0:6891589258 is in state 'finished'
[2025-11-23 01:12:04] 2025-11-23 00:10:59,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,692 | INFO     | sum of deviations: 3620559798095.935
[2025-11-23 01:12:04] 2025-11-23 00:10:59,692 | INFO     | mean x: 1763811391.6453805
[2025-11-23 01:12:04] 2025-11-23 00:10:59,692 | INFO     | mean y: 2861325.4979619565
[2025-11-23 01:12:04] 2025-11-23 00:10:59,693 | INFO     | intersect: -6454079356.316816
[2025-11-23 01:12:04] 2025-11-23 00:10:59,694 | INFO     | chi2: 14.15600365042746
[2025-11-23 01:12:04] 2025-11-23 00:10:59,695 | INFO     | current memory leak: 3.66 B/s (using 1472 data points, chi2=14.16)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,697 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | ..............................
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . Timing measurements:
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . get job = 0 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . initial setup = 8 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . payload setup = 156 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . stage-in = 0 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . payload execution = 90878 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . stage-out = 3 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | . log creation = 1 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,698 | INFO     | ..............................
[2025-11-23 01:12:04] 2025-11-23 00:10:59,829 | INFO     | 
[2025-11-23 01:12:04] 2025-11-23 00:10:59,829 | INFO     | job summary report
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | --------------------------------------------------
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | PanDA job id: 6891589258
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | task id: 47493068
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | errors: (none)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | pilot state: finished 
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | transexitcode: 0
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | exeerrorcode: 0
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | exeerrordiag: 
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | exitcode: 0
[2025-11-23 01:12:04] 2025-11-23 00:10:59,830 | INFO     | exitmsg: OK
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | cpuconsumptiontime: 337764 s
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | nevents: 1000
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | neventsw: 0
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | pid: 20428
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | pgrp: 20428
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | corecount: 8
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | event service: False
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | sizes: {0: 2297917, 1: 2298603, 2: 2298802, 13: 2298802, 24: 2298858, 34: 2298886, 45: 2299042, 56: 2299070, 67: 2299098, 77: 2299126, 86: 2299444, 88: 2299752, 91
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | --------------------------------------------------
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | 
[2025-11-23 01:12:04] 2025-11-23 00:10:59,831 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-23 01:12:04] 2025-11-23 00:10:59,867 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:12:04] 2025-11-23 00:10:59,870 | INFO     | job 6891589258 has completed (purged errors)
[2025-11-23 01:12:04] 2025-11-23 00:10:59,870 | INFO     | overall cleanup function is called
[2025-11-23 01:12:04] 2025-11-23 00:11:00,888 | INFO     | --- collectZombieJob: --- 10, [20428]
[2025-11-23 01:12:04] 2025-11-23 00:11:00,888 | INFO     | zombie collector waiting for pid 20428
[2025-11-23 01:12:04] 2025-11-23 00:11:00,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:12:04] 2025-11-23 00:11:00,889 | INFO     | collected zombie processes
[2025-11-23 01:12:04] 2025-11-23 00:11:00,889 | INFO     | will attempt to kill all subprocesses of pid=20428
[2025-11-23 01:12:04] 2025-11-23 00:11:00,998 | INFO     | process IDs to be killed: [20428] (in reverse order)
[2025-11-23 01:12:04] 2025-11-23 00:11:01,072 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:12:04] 2025-11-23 00:11:01,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:12:04] 2025-11-23 00:11:01,076 | INFO     | did not find any defunct processes belonging to 20428
[2025-11-23 01:12:04] 2025-11-23 00:11:01,080 | INFO     | did not find any defunct processes belonging to 20428
[2025-11-23 01:12:04] 2025-11-23 00:11:01,082 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:12:04] 2025-11-23 00:11:01,082 | INFO     | ready for new job
[2025-11-23 01:12:04] 2025-11-23 00:11:01,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:12:04] 2025-11-23 00:11:01,089 | INFO     | ***************************************
[2025-11-23 01:12:04] 2025-11-23 00:11:01,089 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:12:04] 2025-11-23 00:11:01,089 | INFO     | ***************************************
[2025-11-23 01:12:04] 2025-11-23 00:11:01,089 | INFO     | 
[2025-11-23 01:12:04] 2025-11-23 00:11:01,090 | INFO     | pilot is running in a VM
[2025-11-23 01:12:04] 2025-11-23 00:11:01,090 | INFO     | architecture information:
[2025-11-23 01:12:04] 2025-11-23 00:11:01,090 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:12:04] 2025-11-23 00:11:01,117 | INFO     | cat /etc/os-release:
[2025-11-23 01:12:04] NAME="CentOS Linux"
[2025-11-23 01:12:04] VERSION="7 (Core)"
[2025-11-23 01:12:04] ID="centos"
[2025-11-23 01:12:04] ID_LIKE="rhel fedora"
[2025-11-23 01:12:04] VERSION_ID="7"
[2025-11-23 01:12:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:12:04] ANSI_COLOR="0;31"
[2025-11-23 01:12:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:12:04] HOME_URL="https://www.centos.org/"
[2025-11-23 01:12:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:12:04] 
[2025-11-23 01:12:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:12:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:12:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:12:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:12:04] 
[2025-11-23 01:12:04] 2025-11-23 00:11:01,117 | INFO     | ***************************************
[2025-11-23 01:12:04] 2025-11-23 00:11:01,621 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-23 01:12:04] 2025-11-23 00:11:01,646 | INFO     | sufficient remaining disk space (495143878656 B)
[2025-11-23 01:12:04] 2025-11-23 00:11:01,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:12:04] 2025-11-23 00:11:01,646 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:12:04] 2025-11-23 00:11:01,646 | INFO     | update_server=False
[2025-11-23 01:12:04] 2025-11-23 00:11:01,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:12:04] 2025-11-23 00:11:01,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:12:04] 2025-11-23 00:11:01,848 | INFO     | all job control threads have been joined
[2025-11-23 01:12:04] 2025-11-23 00:11:02,142 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 01:12:04] 2025-11-23 00:11:02,142 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 01:12:04] 2025-11-23 00:11:02,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:12:04] 2025-11-23 00:11:02,143 | INFO     | will abort loop
[2025-11-23 01:12:04] 2025-11-23 00:11:02,510 | INFO     | all data control threads have been joined
[2025-11-23 01:12:04] 2025-11-23 00:11:02,652 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:02,653 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:02,742 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:02,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:12:04] 2025-11-23 00:11:02,853 | INFO     | [job] control thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,060 | INFO     | all payload control threads have been joined
[2025-11-23 01:12:04] 2025-11-23 00:11:03,063 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,149 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,359 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,394 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,468 | INFO     | [job] validate thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,492 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,516 | INFO     | [data] control thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:03,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:04,065 | INFO     | [payload] control thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:04,107 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:04,793 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:04,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:12:04] 2025-11-23 00:11:08,826 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:12:04] 2025-11-23 00:11:31,929 | INFO     | PID=13803 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 01:12:04] 2025-11-23 00:11:31,930 | INFO     | .. there are 8 such processes running
[2025-11-23 01:12:04] 2025-11-23 00:11:31,930 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:12:04] 2025-11-23 00:11:31,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:12:04] 2025-11-23 00:11:31,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:12:04] 2025-11-23 00:11:57,742 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:12:04] 2025-11-23 00:11:58,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041698588480)>', '<ExcThread(monitor, started 140041384859392)>']
[2025-11-23 01:12:04] 2025-11-23 00:11:59,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:12:04] 2025-11-23 00:11:59,056 | INFO     | [monitor] control thread has ended
[2025-11-23 01:12:04] 2025-11-23 00:12:03,915 | INFO     | all workflow threads have been joined
[2025-11-23 01:12:04] 2025-11-23 00:12:03,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:12:04] 2025-11-23 00:12:03,916 | INFO     | traces error code: 0
[2025-11-23 01:12:04] 2025-11-23 00:12:03,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:12:04] 2025-11-23 00:12:04,209 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:12:04] 2025-11-23 00:12:04,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:12:04] 2025-11-23 00:12:04,338 [wrapper] pilotpid: 13803
[2025-11-23 01:12:04] 2025-11-23 00:12:04,379 [wrapper] Pilot exit status: 0
[2025-11-23 01:12:04] 2025-11-23 00:12:04,409 [wrapper] pandaids: 6891589258
[2025-11-23 01:12:04] 2025-11-23 00:12:04,452 [wrapper] cleanup supervisor_pilot 28460 13804
[2025-11-23 01:12:04] 2025-11-23 00:12:04,471 [wrapper] Test setup, not cleaning
[2025-11-23 01:12:04] 2025-11-23 00:12:04,492 [wrapper] apfmon messages muted
[2025-11-23 01:12:04] 2025-11-23 00:12:04,507 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:12:04] 2025-11-23 00:12:04,510 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:12:04]  *** Error codes and diagnostics ***
[2025-11-23 01:12:04]     "exeErrorCode": 0,
[2025-11-23 01:12:04]     "exeErrorDiag": "",
[2025-11-23 01:12:04]     "pilotErrorCode": 0,
[2025-11-23 01:12:04]     "pilotErrorDiag": "",
[2025-11-23 01:12:04]  *** Listing of results directory ***
[2025-11-23 01:12:04] total 1341868
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:45 queuedata.json
[2025-11-23 01:12:04] -rwx------. 1 boinc boinc     36292 Nov 18 18:46 runpilot2-wrapper.sh
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc       100 Nov 21 23:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:12:04] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 23:46 run_atlas
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc       105 Nov 21 23:46 job.xml
[2025-11-23 01:12:04] -rw-r--r--. 2 boinc boinc 411222388 Nov 21 23:46 EVNT.47493065._000525.pool.root.1
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc      6391 Nov 21 23:46 init_data.xml
[2025-11-23 01:12:04] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:46 start_atlas.sh
[2025-11-23 01:12:04] drwxrwx--x. 2 boinc boinc        68 Nov 21 23:46 shared
[2025-11-23 01:12:04] -rw-r--r--. 2 boinc boinc    590106 Nov 21 23:46 input.tar.gz
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc         0 Nov 21 23:46 boinc_lockfile
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc      2772 Nov 21 23:46 pandaJob.out
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc    989798 Nov 21 23:50 agis_schedconf.cvmfs.json
[2025-11-23 01:12:04] drwx------. 5 boinc boinc      4096 Nov 21 23:50 pilot3
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc       533 Nov 23 00:47 boinc_task_state.xml
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc 929431031 Nov 23 01:09 HITS.47493068._005247.pool.root.1
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc        95 Nov 23 01:10 pilot_heartbeat.json
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc      1031 Nov 23 01:10 memory_monitor_summary.json
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc   1526164 Nov 23 01:10 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc   2567933 Nov 23 01:10 log.47493068._005247.job.log.tgz.1
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc      7940 Nov 23 01:10 heartbeat.json
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc      8192 Nov 23 01:12 boinc_mmap_file
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc        29 Nov 23 01:12 wrapper_checkpoint.txt
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc      5071 Nov 23 01:12 pilotlog.txt
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc  12193524 Nov 23 01:12 log.47493068._005247.job.log.1
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc       353 Nov 23 01:12 output.list
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc       620 Nov 23 01:12 runtime_log
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc  14776320 Nov 23 01:12 result.tar.gz
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc       662 Nov 23 01:12 YQ5NDmUxef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLcFKDmr58Usn.diag
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc      8717 Nov 23 01:12 runtime_log.err
[2025-11-23 01:12:04] -rw-r--r--. 1 boinc boinc     21502 Nov 23 01:12 stderr.txt
[2025-11-23 01:12:04] HITS file was successfully produced:
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc 929431031 Nov 23 01:09 shared/HITS.pool.root.1
[2025-11-23 01:12:04]  *** Contents of shared directory: ***
[2025-11-23 01:12:04] total 1324264
[2025-11-23 01:12:04] -rw-r--r--. 2 boinc boinc 411222388 Nov 21 23:46 ATLAS.root_0
[2025-11-23 01:12:04] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:46 start_atlas.sh
[2025-11-23 01:12:04] -rw-r--r--. 2 boinc boinc    590106 Nov 21 23:46 input.tar.gz
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc 929431031 Nov 23 01:09 HITS.pool.root.1
[2025-11-23 01:12:04] -rw-------. 1 boinc boinc  14776320 Nov 23 01:12 result.tar.gz
01:12:06 (10055): run_atlas exited; CPU time 338390.838548
01:12:06 (10055): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN