Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:13:23 (20231): wrapper (7.7.26015): starting
00:13:23 (20231): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 00:13:23] Arguments: --nthreads 8
[2025-11-22 00:13:23] Threads: 8
[2025-11-22 00:13:23] Checking for CVMFS
[2025-11-22 00:13:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:13:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:13:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:13:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:13:25] 2.11.2.0 10419 78708 118892 153148 0 128 15258164 25165825 4291 130560 2 25336033 99.870 13393693 1743 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 00:13:25] CVMFS is ok
[2025-11-22 00:13:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:13:25] Checking for apptainer binary...
[2025-11-22 00:13:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:13:25] Running /usr/bin/apptainer --version
[2025-11-22 00:13:25] apptainer version 1.3.2-1.el7
[2025-11-22 00:13:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:13:31] cg-vwn422.simple-grid.lan
[2025-11-22 00:13:31] apptainer works
[2025-11-22 00:13:31] Set ATHENA_PROC_NUMBER=8
[2025-11-22 00:13:31] Set ATHENA_CORE_NUMBER=8
[2025-11-22 00:13:31] Starting ATLAS job with PandaID=6891589171
[2025-11-22 00:13:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:53:33]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:53:33] 2025-11-23 00:52:41,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:53:33] 2025-11-23 00:52:41,968 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:53:33] 2025-11-23 00:52:41,970 | INFO     | sum of square deviations: 1059136251327.67
[2025-11-23 01:53:33] 2025-11-23 00:52:42,065 | INFO     | sum of deviations: 4055165522523.535
[2025-11-23 01:53:33] 2025-11-23 00:52:42,065 | INFO     | mean x: 1763813111.9256308
[2025-11-23 01:53:33] 2025-11-23 00:52:42,066 | INFO     | mean y: 2868929.379814077
[2025-11-23 01:53:33] 2025-11-23 00:52:42,066 | INFO     | intersect: -6750326526.530365
[2025-11-23 01:53:33] 2025-11-23 00:52:42,068 | INFO     | chi2: 10.191743908475186
[2025-11-23 01:53:33] 2025-11-23 00:52:42,070 | INFO     | sum of square deviations: 1048622690409.9745
[2025-11-23 01:53:33] 2025-11-23 00:52:42,160 | INFO     | sum of deviations: 4555506825873.864
[2025-11-23 01:53:33] 2025-11-23 00:52:42,160 | INFO     | mean x: 1763812959.4303796
[2025-11-23 01:53:33] 2025-11-23 00:52:42,161 | INFO     | mean y: 2876185.8407728183
[2025-11-23 01:53:33] 2025-11-23 00:52:42,161 | INFO     | intersect: -7659614860.493968
[2025-11-23 01:53:33] 2025-11-23 00:52:42,163 | INFO     | chi2: 7.087545905896162
[2025-11-23 01:53:33] 2025-11-23 00:52:42,163 | INFO     | current chi2=7.087545905896162 (change=30.45796706094287 %)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,165 | INFO     | sum of square deviations: 1038178944754.7106
[2025-11-23 01:53:33] 2025-11-23 00:52:42,250 | INFO     | sum of deviations: 4975334318423.757
[2025-11-23 01:53:33] 2025-11-23 00:52:42,250 | INFO     | mean x: 1763812806.9351604
[2025-11-23 01:53:33] 2025-11-23 00:52:42,250 | INFO     | mean y: 2882310.96657754
[2025-11-23 01:53:33] 2025-11-23 00:52:42,250 | INFO     | intersect: -8449955645.300425
[2025-11-23 01:53:33] 2025-11-23 00:52:42,252 | INFO     | chi2: 4.469705140993088
[2025-11-23 01:53:33] 2025-11-23 00:52:42,252 | INFO     | current chi2=4.469705140993088 (change=36.935785667720054 %)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,255 | INFO     | sum of square deviations: 1027804417390.888
[2025-11-23 01:53:33] 2025-11-23 00:52:42,331 | INFO     | sum of deviations: 5032581344693.091
[2025-11-23 01:53:33] 2025-11-23 00:52:42,331 | INFO     | mean x: 1763812654.4372904
[2025-11-23 01:53:33] 2025-11-23 00:52:42,331 | INFO     | mean y: 2883150.6747149564
[2025-11-23 01:53:33] 2025-11-23 00:52:42,331 | INFO     | intersect: -8633517423.267208
[2025-11-23 01:53:33] 2025-11-23 00:52:42,333 | INFO     | chi2: 4.313662446949806
[2025-11-23 01:53:33] 2025-11-23 00:52:42,333 | INFO     | current chi2=4.313662446949806 (change=3.491118297987144 %)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,334 | INFO     | right removable region: 1490
[2025-11-23 01:53:33] 2025-11-23 00:52:42,336 | INFO     | sum of square deviations: 1048621380739.976
[2025-11-23 01:53:33] 2025-11-23 00:52:42,398 | INFO     | sum of deviations: 3507062502047.333
[2025-11-23 01:53:33] 2025-11-23 00:52:42,399 | INFO     | mean x: 1763813264.4303796
[2025-11-23 01:53:33] 2025-11-23 00:52:42,399 | INFO     | mean y: 2876876.615589607
[2025-11-23 01:53:33] 2025-11-23 00:52:42,399 | INFO     | intersect: -5896109615.470213
[2025-11-23 01:53:33] 2025-11-23 00:52:42,401 | INFO     | chi2: 6.738700175900337
[2025-11-23 01:53:33] 2025-11-23 00:52:42,401 | INFO     | current chi2=6.738700175900337 (change=33.880793744271664 %)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,403 | INFO     | sum of square deviations: 1038176874665.9089
[2025-11-23 01:53:33] 2025-11-23 00:52:42,470 | INFO     | sum of deviations: 3326304821362.3433
[2025-11-23 01:53:33] 2025-11-23 00:52:42,471 | INFO     | mean x: 1763813416.9311497
[2025-11-23 01:53:33] 2025-11-23 00:52:42,471 | INFO     | mean y: 2879514.1878342247
[2025-11-23 01:53:33] 2025-11-23 00:52:42,471 | INFO     | intersect: -5648355083.586943
[2025-11-23 01:53:33] 2025-11-23 00:52:42,473 | INFO     | chi2: 6.388493657641331
[2025-11-23 01:53:33] 2025-11-23 00:52:42,473 | INFO     | current chi2=6.388493657641331 (change=5.1969446498221075 %)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,473 | INFO     | left removable region: 20
[2025-11-23 01:53:33] 2025-11-23 00:52:42,476 | INFO     | sum of square deviations: 984984375565.8501
[2025-11-23 01:53:33] 2025-11-23 00:52:42,538 | INFO     | sum of deviations: 4073872992173.384
[2025-11-23 01:53:33] 2025-11-23 00:52:42,539 | INFO     | mean x: 1763813233.9408164
[2025-11-23 01:53:33] 2025-11-23 00:52:42,539 | INFO     | mean y: 2897229.1653061225
[2025-11-23 01:53:33] 2025-11-23 00:52:42,539 | INFO     | intersect: -7292194221.256492
[2025-11-23 01:53:33] 2025-11-23 00:52:42,541 | INFO     | chi2: 0.3379774717253005
[2025-11-23 01:53:33] 2025-11-23 00:52:42,542 | INFO     | current memory leak: 4.14 B/s (using 1470 data points, chi2=0.34)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,544 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | ..............................
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . Timing measurements:
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . get job = 0 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . initial setup = 10 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . payload setup = 42 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . stage-in = 0 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . payload execution = 91954 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . stage-out = 5 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | . log creation = 2 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,545 | INFO     | ..............................
[2025-11-23 01:53:33] 2025-11-23 00:52:42,671 | INFO     | 
[2025-11-23 01:53:33] 2025-11-23 00:52:42,671 | INFO     | job summary report
[2025-11-23 01:53:33] 2025-11-23 00:52:42,671 | INFO     | --------------------------------------------------
[2025-11-23 01:53:33] 2025-11-23 00:52:42,671 | INFO     | PanDA job id: 6891589171
[2025-11-23 01:53:33] 2025-11-23 00:52:42,671 | INFO     | task id: 47493068
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | errors: (none)
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | pilot state: finished 
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | transexitcode: 0
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | exeerrorcode: 0
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | exeerrordiag: 
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | exitcode: 0
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | exitmsg: OK
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | cpuconsumptiontime: 340199 s
[2025-11-23 01:53:33] 2025-11-23 00:52:42,672 | INFO     | nevents: 1000
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | neventsw: 0
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | pid: 31612
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | pgrp: 31612
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | corecount: 8
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | event service: False
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | sizes: {0: 2297968, 1: 2298569, 2: 2298852, 3: 2298852, 14: 2298880, 24: 2298908, 35: 2299064, 46: 2299092, 56: 2299120, 67: 2299148, 78: 2299176, 81: 2299774, 89:
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | --------------------------------------------------
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | 
[2025-11-23 01:53:33] 2025-11-23 00:52:42,673 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-23 01:53:33] 2025-11-23 00:52:43,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,153 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:53:33] 2025-11-23 00:52:43,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:53:33] 2025-11-23 00:52:43,154 | INFO     | job 6891589171 has completed (purged errors)
[2025-11-23 01:53:33] 2025-11-23 00:52:43,154 | INFO     | overall cleanup function is called
[2025-11-23 01:53:33] 2025-11-23 00:52:44,180 | INFO     | --- collectZombieJob: --- 10, [31612]
[2025-11-23 01:53:33] 2025-11-23 00:52:44,180 | INFO     | zombie collector waiting for pid 31612
[2025-11-23 01:53:33] 2025-11-23 00:52:44,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:53:33] 2025-11-23 00:52:44,181 | INFO     | collected zombie processes
[2025-11-23 01:53:33] 2025-11-23 00:52:44,181 | INFO     | will attempt to kill all subprocesses of pid=31612
[2025-11-23 01:53:33] 2025-11-23 00:52:44,304 | INFO     | process IDs to be killed: [31612] (in reverse order)
[2025-11-23 01:53:33] 2025-11-23 00:52:45,303 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:53:33] 2025-11-23 00:52:45,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:53:33] 2025-11-23 00:52:45,308 | INFO     | did not find any defunct processes belonging to 31612
[2025-11-23 01:53:33] 2025-11-23 00:52:45,311 | INFO     | did not find any defunct processes belonging to 31612
[2025-11-23 01:53:33] 2025-11-23 00:52:45,392 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:53:33] 2025-11-23 00:52:45,393 | INFO     | ready for new job
[2025-11-23 01:53:33] 2025-11-23 00:52:45,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:53:33] 2025-11-23 00:52:45,400 | INFO     | ***************************************
[2025-11-23 01:53:33] 2025-11-23 00:52:45,401 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:53:33] 2025-11-23 00:52:45,401 | INFO     | ***************************************
[2025-11-23 01:53:33] 2025-11-23 00:52:45,401 | INFO     | 
[2025-11-23 01:53:33] 2025-11-23 00:52:45,402 | INFO     | pilot is running in a VM
[2025-11-23 01:53:33] 2025-11-23 00:52:45,402 | INFO     | architecture information:
[2025-11-23 01:53:33] 2025-11-23 00:52:45,419 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:53:33] 2025-11-23 00:52:45,678 | INFO     | cat /etc/os-release:
[2025-11-23 01:53:33] NAME="CentOS Linux"
[2025-11-23 01:53:33] VERSION="7 (Core)"
[2025-11-23 01:53:33] ID="centos"
[2025-11-23 01:53:33] ID_LIKE="rhel fedora"
[2025-11-23 01:53:33] VERSION_ID="7"
[2025-11-23 01:53:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:53:33] ANSI_COLOR="0;31"
[2025-11-23 01:53:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:53:33] HOME_URL="https://www.centos.org/"
[2025-11-23 01:53:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:53:33] 
[2025-11-23 01:53:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:53:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:53:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:53:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:53:33] 
[2025-11-23 01:53:33] 2025-11-23 00:52:45,679 | INFO     | ***************************************
[2025-11-23 01:53:33] 2025-11-23 00:52:46,182 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-23 01:53:33] 2025-11-23 00:52:46,405 | INFO     | sufficient remaining disk space (493196673024 B)
[2025-11-23 01:53:33] 2025-11-23 00:52:46,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:53:33] 2025-11-23 00:52:46,406 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:53:33] 2025-11-23 00:52:46,406 | INFO     | update_server=False
[2025-11-23 01:53:33] 2025-11-23 00:52:46,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:53:33] 2025-11-23 00:52:46,425 | INFO     | all job control threads have been joined
[2025-11-23 01:53:33] 2025-11-23 00:52:46,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:53:33] 2025-11-23 00:52:46,589 | INFO     | aborting loop
[2025-11-23 01:53:33] 2025-11-23 00:52:46,898 | INFO     | all payload control threads have been joined
[2025-11-23 01:53:33] 2025-11-23 00:52:46,999 | INFO     | all data control threads have been joined
[2025-11-23 01:53:33] 2025-11-23 00:52:47,412 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,431 | INFO     | [job] control thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,521 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,595 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,618 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:53:33] 2025-11-23 00:52:47,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:53:33] 2025-11-23 00:52:47,771 | INFO     | [job] validate thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:53:33] 2025-11-23 00:52:47,904 | INFO     | [payload] control thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:47,986 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:48,005 | INFO     | [data] control thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:48,051 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:48,553 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:48,688 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:48,860 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:49,732 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:52:51,810 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:53:33] 2025-11-23 00:53:15,035 | INFO     | PID=24230 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 01:53:33] 2025-11-23 00:53:15,036 | INFO     | .. there are 9 such processes running
[2025-11-23 01:53:33] 2025-11-23 00:53:15,037 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:53:33] 2025-11-23 00:53:15,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:53:33] 2025-11-23 00:53:15,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:53:33] 2025-11-23 00:53:22,607 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:53:33] 2025-11-23 00:53:23,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671373662016)>', '<ExcThread(monitor, started 140670605960960)>']
[2025-11-23 01:53:33] 2025-11-23 00:53:24,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:53:33] 2025-11-23 00:53:24,093 | INFO     | [monitor] control thread has ended
[2025-11-23 01:53:33] 2025-11-23 00:53:28,960 | INFO     | all workflow threads have been joined
[2025-11-23 01:53:33] 2025-11-23 00:53:28,960 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:53:33] 2025-11-23 00:53:28,961 | INFO     | traces error code: 0
[2025-11-23 01:53:33] 2025-11-23 00:53:28,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:53:33] 2025-11-23 00:53:29,296 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:53:33] 2025-11-23 00:53:29,360 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:53:33] 2025-11-23 00:53:29,427 [wrapper] pilotpid: 24230
[2025-11-23 01:53:33] 2025-11-23 00:53:29,533 [wrapper] Pilot exit status: 0
[2025-11-23 01:53:33] 2025-11-23 00:53:29,899 [wrapper] pandaids: 6891589171
[2025-11-23 01:53:33] 2025-11-23 00:53:30,913 [wrapper] cleanup supervisor_pilot 31242 24231
[2025-11-23 01:53:33] 2025-11-23 00:53:30,970 [wrapper] Test setup, not cleaning
[2025-11-23 01:53:33] 2025-11-23 00:53:31,061 [wrapper] apfmon messages muted
[2025-11-23 01:53:33] 2025-11-23 00:53:31,188 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:53:33] 2025-11-23 00:53:31,308 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:53:33]  *** Error codes and diagnostics ***
[2025-11-23 01:53:33]     "exeErrorCode": 0,
[2025-11-23 01:53:33]     "exeErrorDiag": "",
[2025-11-23 01:53:33]     "pilotErrorCode": 0,
[2025-11-23 01:53:33]     "pilotErrorDiag": "",
[2025-11-23 01:53:33]  *** Listing of results directory ***
[2025-11-23 01:53:34] total 1339228
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:40 queuedata.json
[2025-11-23 01:53:34] -rwx------. 1 boinc boinc     36292 Nov 18 18:42 runpilot2-wrapper.sh
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc       100 Nov 22 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:53:34] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 00:13 run_atlas
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc       105 Nov 22 00:13 job.xml
[2025-11-23 01:53:34] -rw-r--r--. 2 boinc boinc 412713937 Nov 22 00:13 EVNT.47493065._000523.pool.root.1
[2025-11-23 01:53:34] -rw-r--r--. 2 boinc boinc    590103 Nov 22 00:13 input.tar.gz
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc      6389 Nov 22 00:13 init_data.xml
[2025-11-23 01:53:34] -rw-r--r--. 2 boinc boinc     15120 Nov 22 00:13 start_atlas.sh
[2025-11-23 01:53:34] drwxrwx--x. 2 boinc boinc        68 Nov 22 00:13 shared
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc         0 Nov 22 00:13 boinc_lockfile
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc      2773 Nov 22 00:13 pandaJob.out
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc    989798 Nov 22 00:15 agis_schedconf.cvmfs.json
[2025-11-23 01:53:34] drwx------. 5 boinc boinc      4096 Nov 22 00:15 pilot3
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc       533 Nov 23 01:36 boinc_task_state.xml
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc 925005639 Nov 23 01:49 HITS.47493068._005225.pool.root.1
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc      1031 Nov 23 01:50 memory_monitor_summary.json
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc   1526164 Nov 23 01:51 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc   2578706 Nov 23 01:51 log.47493068._005225.job.log.tgz.1
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc      8625 Nov 23 01:52 heartbeat.json
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc        95 Nov 23 01:53 pilot_heartbeat.json
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc      8192 Nov 23 01:53 boinc_mmap_file
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc        29 Nov 23 01:53 wrapper_checkpoint.txt
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc      4884 Nov 23 01:53 pilotlog.txt
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc  12293654 Nov 23 01:53 log.47493068._005225.job.log.1
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc       353 Nov 23 01:53 output.list
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc       620 Nov 23 01:53 runtime_log
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc  14888960 Nov 23 01:53 result.tar.gz
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc      8703 Nov 23 01:53 runtime_log.err
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc       662 Nov 23 01:53 n2iMDmYtef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1bFKDmcfNMLo.diag
[2025-11-23 01:53:34] -rw-r--r--. 1 boinc boinc     20821 Nov 23 01:53 stderr.txt
[2025-11-23 01:53:34] HITS file was successfully produced:
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc 925005639 Nov 23 01:49 shared/HITS.pool.root.1
[2025-11-23 01:53:34]  *** Contents of shared directory: ***
[2025-11-23 01:53:34] total 1321508
[2025-11-23 01:53:34] -rw-r--r--. 2 boinc boinc 412713937 Nov 22 00:13 ATLAS.root_0
[2025-11-23 01:53:34] -rw-r--r--. 2 boinc boinc    590103 Nov 22 00:13 input.tar.gz
[2025-11-23 01:53:34] -rw-r--r--. 2 boinc boinc     15120 Nov 22 00:13 start_atlas.sh
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc 925005639 Nov 23 01:49 HITS.pool.root.1
[2025-11-23 01:53:34] -rw-------. 1 boinc boinc  14888960 Nov 23 01:53 result.tar.gz
01:53:35 (20231): run_atlas exited; CPU time 340702.977913
01:53:35 (20231): called boinc_finish(0)

</stderr_txt>
]]>

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