Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:21:23 (24368): wrapper (7.7.26015): starting
22:21:23 (24368): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 22:21:23] Arguments: --nthreads 8
[2025-11-19 22:21:23] Threads: 8
[2025-11-19 22:21:23] Checking for CVMFS
[2025-11-19 22:21:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 22:21:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 22:21:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 22:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 22:21:24] 2.11.2.0 11478 275773 141412 153057 3 223 15250950 25165824 4147 130560 2 137681460 99.879 76876402 3271 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 22:21:24] CVMFS is ok
[2025-11-19 22:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 22:21:24] Checking for apptainer binary...
[2025-11-19 22:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 22:21:24] Running /usr/bin/apptainer --version
[2025-11-19 22:21:25] apptainer version 1.3.2-1.el7
[2025-11-19 22:21:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 22:21:26] cg-vwn355.simple-grid.lan
[2025-11-19 22:21:26] apptainer works
[2025-11-19 22:21:26] Set ATHENA_PROC_NUMBER=8
[2025-11-19 22:21:26] Set ATHENA_CORE_NUMBER=8
[2025-11-19 22:21:26] Starting ATLAS job with PandaID=6891588707
[2025-11-19 22:21:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:59:47]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:59:47] 2025-11-20 22:59:01,762 | INFO     | sum of square deviations: 1067601353934.5391
[2025-11-20 23:59:47] 2025-11-20 22:59:01,832 | INFO     | sum of deviations: 3626903379788.2827
[2025-11-20 23:59:47] 2025-11-20 22:59:01,832 | INFO     | mean x: 1763633425.8264902
[2025-11-20 23:59:47] 2025-11-20 22:59:01,832 | INFO     | mean y: 2877497.898013245
[2025-11-20 23:59:47] 2025-11-20 22:59:01,833 | INFO     | intersect: -5988617369.791986
[2025-11-20 23:59:47] 2025-11-20 22:59:01,835 | INFO     | chi2: 9.381139992757754
[2025-11-20 23:59:47] 2025-11-20 22:59:01,837 | INFO     | sum of square deviations: 1057031729443.2151
[2025-11-20 23:59:47] 2025-11-20 22:59:01,904 | INFO     | sum of deviations: 4111771366756.153
[2025-11-20 23:59:47] 2025-11-20 22:59:01,905 | INFO     | mean x: 1763633273.330897
[2025-11-20 23:59:47] 2025-11-20 22:59:01,905 | INFO     | mean y: 2884493.588039867
[2025-11-20 23:59:47] 2025-11-20 22:59:01,905 | INFO     | intersect: -6857512023.137315
[2025-11-20 23:59:47] 2025-11-20 22:59:01,912 | INFO     | chi2: 6.511293363178635
[2025-11-20 23:59:47] 2025-11-20 22:59:01,912 | INFO     | current chi2=6.511293363178635 (change=30.591661906704758 %)
[2025-11-20 23:59:47] 2025-11-20 22:59:01,915 | INFO     | sum of square deviations: 1046532106264.3285
[2025-11-20 23:59:47] 2025-11-20 22:59:01,980 | INFO     | sum of deviations: 4549172595864.603
[2025-11-20 23:59:47] 2025-11-20 22:59:01,980 | INFO     | mean x: 1763633120.8353333
[2025-11-20 23:59:47] 2025-11-20 22:59:01,980 | INFO     | mean y: 2890843.188666667
[2025-11-20 23:59:47] 2025-11-20 22:59:01,980 | INFO     | intersect: -7663449648.84095
[2025-11-20 23:59:47] 2025-11-20 22:59:01,982 | INFO     | chi2: 3.9319002232728386
[2025-11-20 23:59:47] 2025-11-20 22:59:01,983 | INFO     | current chi2=3.9319002232728386 (change=39.61414416515565 %)
[2025-11-20 23:59:47] 2025-11-20 22:59:01,985 | INFO     | sum of square deviations: 1036102160581.0597
[2025-11-20 23:59:47] 2025-11-20 22:59:02,052 | INFO     | sum of deviations: 4707507424903.629
[2025-11-20 23:59:47] 2025-11-20 22:59:02,053 | INFO     | mean x: 1763632968.3391304
[2025-11-20 23:59:47] 2025-11-20 22:59:02,053 | INFO     | mean y: 2893156.389297659
[2025-11-20 23:59:47] 2025-11-20 22:59:02,053 | INFO     | intersect: -8010134524.785729
[2025-11-20 23:59:47] 2025-11-20 22:59:02,055 | INFO     | chi2: 3.4616962506217757
[2025-11-20 23:59:47] 2025-11-20 22:59:02,055 | INFO     | current chi2=3.4616962506217757 (change=11.958695438605869 %)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,056 | INFO     | right removable region: 1494
[2025-11-20 23:59:47] 2025-11-20 22:59:02,058 | INFO     | sum of square deviations: 1057030507613.2139
[2025-11-20 23:59:47] 2025-11-20 22:59:02,074 | INFO     | time since job start (92223s) is within the limit (172800.0s)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,122 | INFO     | sum of deviations: 3124398415413.324
[2025-11-20 23:59:47] 2025-11-20 22:59:02,122 | INFO     | mean x: 1763633578.330897
[2025-11-20 23:59:47] 2025-11-20 22:59:02,123 | INFO     | mean y: 2884744.81461794
[2025-11-20 23:59:47] 2025-11-20 22:59:02,123 | INFO     | intersect: -5210109504.470663
[2025-11-20 23:59:47] 2025-11-20 22:59:02,125 | INFO     | chi2: 6.502195145328385
[2025-11-20 23:59:47] 2025-11-20 22:59:02,125 | INFO     | current chi2=6.502195145328385 (change=30.68864604570357 %)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,127 | INFO     | sum of square deviations: 1046530121513.6625
[2025-11-20 23:59:47] 2025-11-20 22:59:02,198 | INFO     | sum of deviations: 2975374499274.0923
[2025-11-20 23:59:47] 2025-11-20 22:59:02,199 | INFO     | mean x: 1763633730.832
[2025-11-20 23:59:47] 2025-11-20 22:59:02,199 | INFO     | mean y: 2886907.4646666665
[2025-11-20 23:59:47] 2025-11-20 22:59:02,199 | INFO     | intersect: -5011274386.992309
[2025-11-20 23:59:47] 2025-11-20 22:59:02,201 | INFO     | chi2: 6.258127705034757
[2025-11-20 23:59:47] 2025-11-20 22:59:02,201 | INFO     | current chi2=6.258127705034757 (change=3.753616045636264 %)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,201 | INFO     | left removable region: 20
[2025-11-20 23:59:47] 2025-11-20 22:59:02,203 | INFO     | sum of square deviations: 993049875043.3494
[2025-11-20 23:59:47] 2025-11-20 22:59:02,275 | INFO     | sum of deviations: 3890713398076.8647
[2025-11-20 23:59:47] 2025-11-20 22:59:02,276 | INFO     | mean x: 1763633547.8466756
[2025-11-20 23:59:47] 2025-11-20 22:59:02,276 | INFO     | mean y: 2905304.4816824966
[2025-11-20 23:59:47] 2025-11-20 22:59:02,276 | INFO     | intersect: -6906911459.359468
[2025-11-20 23:59:47] 2025-11-20 22:59:02,278 | INFO     | chi2: 0.2526838147841768
[2025-11-20 23:59:47] 2025-11-20 22:59:02,278 | INFO     | current memory leak: 3.92 B/s (using 1474 data points, chi2=0.25)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,280 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,280 | INFO     | ..............................
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . Timing measurements:
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . get job = 0 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . initial setup = 3 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . payload setup = 16 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . stage-in = 0 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . payload execution = 92145 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . stage-out = 7 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | . log creation = 1 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,281 | INFO     | ..............................
[2025-11-20 23:59:47] 2025-11-20 22:59:02,412 | INFO     | 
[2025-11-20 23:59:47] 2025-11-20 22:59:02,412 | INFO     | job summary report
[2025-11-20 23:59:47] 2025-11-20 22:59:02,412 | INFO     | --------------------------------------------------
[2025-11-20 23:59:47] 2025-11-20 22:59:02,412 | INFO     | PanDA job id: 6891588707
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | task id: 47493068
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | errors: (none)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | pilot state: finished 
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | transexitcode: 0
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | exeerrorcode: 0
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | exeerrordiag: 
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | exitcode: 0
[2025-11-20 23:59:47] 2025-11-20 22:59:02,413 | INFO     | exitmsg: OK
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | cpuconsumptiontime: 344717 s
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | nevents: 1000
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | neventsw: 0
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | pid: 2228
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | pgrp: 2228
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | corecount: 8
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | event service: False
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | sizes: {0: 2296967, 1: 2297222, 2: 2297222, 9: 2297512, 12: 2297540, 92166: 2360605, 92174: 2371195, 92178: 2371251, 92197: 2371497}
[2025-11-20 23:59:47] 2025-11-20 22:59:02,414 | INFO     | --------------------------------------------------
[2025-11-20 23:59:47] 2025-11-20 22:59:02,415 | INFO     | 
[2025-11-20 23:59:47] 2025-11-20 22:59:02,415 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-20 23:59:47] 2025-11-20 22:59:02,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,453 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,455 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:59:47] 2025-11-20 22:59:02,455 | INFO     | job 6891588707 has completed (purged errors)
[2025-11-20 23:59:47] 2025-11-20 22:59:02,455 | INFO     | overall cleanup function is called
[2025-11-20 23:59:47] 2025-11-20 22:59:03,229 | INFO     | PID=28119 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 23:59:47] 2025-11-20 22:59:03,229 | INFO     | .. there are 9 such processes running
[2025-11-20 23:59:47] 2025-11-20 22:59:03,473 | INFO     | --- collectZombieJob: --- 10, [2228]
[2025-11-20 23:59:47] 2025-11-20 22:59:03,473 | INFO     | zombie collector waiting for pid 2228
[2025-11-20 23:59:47] 2025-11-20 22:59:03,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:59:47] 2025-11-20 22:59:03,473 | INFO     | collected zombie processes
[2025-11-20 23:59:47] 2025-11-20 22:59:03,473 | INFO     | will attempt to kill all subprocesses of pid=2228
[2025-11-20 23:59:47] 2025-11-20 22:59:03,594 | INFO     | process IDs to be killed: [2228] (in reverse order)
[2025-11-20 23:59:47] 2025-11-20 22:59:03,660 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:59:47] 2025-11-20 22:59:03,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:59:47] 2025-11-20 22:59:03,664 | INFO     | did not find any defunct processes belonging to 2228
[2025-11-20 23:59:47] 2025-11-20 22:59:03,667 | INFO     | did not find any defunct processes belonging to 2228
[2025-11-20 23:59:47] 2025-11-20 22:59:03,669 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:59:47] 2025-11-20 22:59:03,670 | INFO     | ready for new job
[2025-11-20 23:59:47] 2025-11-20 22:59:03,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:59:47] 2025-11-20 22:59:03,677 | INFO     | ***************************************
[2025-11-20 23:59:47] 2025-11-20 22:59:03,677 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:59:47] 2025-11-20 22:59:03,677 | INFO     | ***************************************
[2025-11-20 23:59:47] 2025-11-20 22:59:03,678 | INFO     | 
[2025-11-20 23:59:47] 2025-11-20 22:59:03,678 | INFO     | pilot is running in a VM
[2025-11-20 23:59:47] 2025-11-20 22:59:03,678 | INFO     | architecture information:
[2025-11-20 23:59:47] 2025-11-20 22:59:03,679 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:59:47] 2025-11-20 22:59:03,699 | INFO     | cat /etc/os-release:
[2025-11-20 23:59:47] NAME="CentOS Linux"
[2025-11-20 23:59:47] VERSION="7 (Core)"
[2025-11-20 23:59:47] ID="centos"
[2025-11-20 23:59:47] ID_LIKE="rhel fedora"
[2025-11-20 23:59:47] VERSION_ID="7"
[2025-11-20 23:59:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:59:47] ANSI_COLOR="0;31"
[2025-11-20 23:59:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:59:47] HOME_URL="https://www.centos.org/"
[2025-11-20 23:59:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:59:47] 
[2025-11-20 23:59:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:59:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:59:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:59:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:59:47] 
[2025-11-20 23:59:47] 2025-11-20 22:59:03,700 | INFO     | ***************************************
[2025-11-20 23:59:47] 2025-11-20 22:59:04,203 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-20 23:59:47] 2025-11-20 22:59:04,227 | INFO     | sufficient remaining disk space (494796800000 B)
[2025-11-20 23:59:47] 2025-11-20 22:59:04,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:59:47] 2025-11-20 22:59:04,228 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:59:47] 2025-11-20 22:59:04,228 | INFO     | update_server=False
[2025-11-20 23:59:47] 2025-11-20 22:59:04,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:59:47] 2025-11-20 22:59:04,228 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-20 23:59:47] 2025-11-20 22:59:04,229 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:59:47] 2025-11-20 22:59:04,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:59:47] 2025-11-20 22:59:04,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:59:47] 2025-11-20 22:59:04,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:59:47] 2025-11-20 22:59:04,245 | INFO     | all payload control threads have been joined
[2025-11-20 23:59:47] 2025-11-20 22:59:04,355 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:59:47] 2025-11-20 22:59:04,356 | INFO     | aborting loop
[2025-11-20 23:59:47] 2025-11-20 22:59:04,379 | INFO     | all job control threads have been joined
[2025-11-20 23:59:47] 2025-11-20 22:59:04,780 | INFO     | all data control threads have been joined
[2025-11-20 23:59:47] 2025-11-20 22:59:05,234 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,235 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,250 | INFO     | [payload] control thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:59:47] 2025-11-20 22:59:05,361 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,382 | INFO     | [job] control thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,570 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,696 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,739 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,751 | INFO     | [job] validate thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,786 | INFO     | [data] control thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,807 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:05,869 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:06,352 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:06,751 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:07,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:59:47] 2025-11-20 22:59:07,312 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:11,015 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:59:47] 2025-11-20 22:59:40,610 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:59:47] 2025-11-20 22:59:42,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140405391603520)>', '<ExcThread(monitor, started 140404812928768)>']
[2025-11-20 23:59:47] 2025-11-20 22:59:42,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:59:47] 2025-11-20 22:59:42,430 | INFO     | [monitor] control thread has ended
[2025-11-20 23:59:47] 2025-11-20 22:59:47,314 | INFO     | all workflow threads have been joined
[2025-11-20 23:59:47] 2025-11-20 22:59:47,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:59:47] 2025-11-20 22:59:47,315 | INFO     | traces error code: 0
[2025-11-20 23:59:47] 2025-11-20 22:59:47,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:59:47] 2025-11-20 22:59:47,502 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:59:47] 2025-11-20 22:59:47,506 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:59:47] 2025-11-20 22:59:47,510 [wrapper] pilotpid: 28119
[2025-11-20 23:59:47] 2025-11-20 22:59:47,513 [wrapper] Pilot exit status: 0
[2025-11-20 23:59:47] 2025-11-20 22:59:47,532 [wrapper] pandaids: 6891588707
[2025-11-20 23:59:47] 2025-11-20 22:59:47,572 [wrapper] cleanup supervisor_pilot   410 28120
[2025-11-20 23:59:47] 2025-11-20 22:59:47,581 [wrapper] Test setup, not cleaning
[2025-11-20 23:59:47] 2025-11-20 22:59:47,585 [wrapper] apfmon messages muted
[2025-11-20 23:59:47] 2025-11-20 22:59:47,588 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:59:47] 2025-11-20 22:59:47,590 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:59:47]  *** Error codes and diagnostics ***
[2025-11-20 23:59:47]     "exeErrorCode": 0,
[2025-11-20 23:59:47]     "exeErrorDiag": "",
[2025-11-20 23:59:47]     "pilotErrorCode": 0,
[2025-11-20 23:59:47]     "pilotErrorDiag": "",
[2025-11-20 23:59:47]  *** Listing of results directory ***
[2025-11-20 23:59:47] total 1335272
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-20 23:59:47] -rwx------. 1 boinc boinc     36292 Nov 18 18:40 runpilot2-wrapper.sh
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc      5112 Nov 18 18:40 queuedata.json
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc       100 Nov 19 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:59:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 22:21 run_atlas
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc       105 Nov 19 22:21 job.xml
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc      6390 Nov 19 22:21 init_data.xml
[2025-11-20 23:59:47] -rw-r--r--. 2 boinc boinc 410199922 Nov 19 22:21 EVNT.47493065._000520.pool.root.1
[2025-11-20 23:59:47] -rw-r--r--. 2 boinc boinc     15120 Nov 19 22:21 start_atlas.sh
[2025-11-20 23:59:47] drwxrwx--x. 2 boinc boinc        68 Nov 19 22:21 shared
[2025-11-20 23:59:47] -rw-r--r--. 2 boinc boinc    590098 Nov 19 22:21 input.tar.gz
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc         0 Nov 19 22:21 boinc_lockfile
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc      2770 Nov 19 22:21 pandaJob.out
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc    989443 Nov 19 22:21 agis_schedconf.cvmfs.json
[2025-11-20 23:59:47] drwx------. 5 boinc boinc      4096 Nov 19 22:21 pilot3
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc       533 Nov 20 23:41 boinc_task_state.xml
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc 923576236 Nov 20 23:57 HITS.47493068._005191.pool.root.1
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc      1033 Nov 20 23:58 memory_monitor_summary.json
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc   1526164 Nov 20 23:58 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc        95 Nov 20 23:58 pilot_heartbeat.json
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc   2569147 Nov 20 23:58 log.47493068._005191.job.log.tgz.1
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc      7940 Nov 20 23:59 heartbeat.json
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc      8192 Nov 20 23:59 boinc_mmap_file
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc        29 Nov 20 23:59 wrapper_checkpoint.txt
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc      4615 Nov 20 23:59 pilotlog.txt
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc  12250281 Nov 20 23:59 log.47493068._005191.job.log.1
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc       353 Nov 20 23:59 output.list
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc       620 Nov 20 23:59 runtime_log
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc  14837760 Nov 20 23:59 result.tar.gz
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc       662 Nov 20 23:59 TKbLDmaref8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtbFKDmXYSlQn.diag
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc      8703 Nov 20 23:59 runtime_log.err
[2025-11-20 23:59:47] -rw-r--r--. 1 boinc boinc     20865 Nov 20 23:59 stderr.txt
[2025-11-20 23:59:47] HITS file was successfully produced:
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc 923576236 Nov 20 23:57 shared/HITS.pool.root.1
[2025-11-20 23:59:47]  *** Contents of shared directory: ***
[2025-11-20 23:59:47] total 1317608
[2025-11-20 23:59:47] -rw-r--r--. 2 boinc boinc 410199922 Nov 19 22:21 ATLAS.root_0
[2025-11-20 23:59:47] -rw-r--r--. 2 boinc boinc     15120 Nov 19 22:21 start_atlas.sh
[2025-11-20 23:59:47] -rw-r--r--. 2 boinc boinc    590098 Nov 19 22:21 input.tar.gz
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc 923576236 Nov 20 23:57 HITS.pool.root.1
[2025-11-20 23:59:47] -rw-------. 1 boinc boinc  14837760 Nov 20 23:59 result.tar.gz
23:59:49 (24368): run_atlas exited; CPU time 345218.430615
23:59:49 (24368): called boinc_finish(0)

</stderr_txt>
]]>

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