Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:56:19 (12622): wrapper (7.7.26015): starting
23:56:19 (12622): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:56:19] Arguments: --nthreads 8
[2025-11-20 23:56:19] Threads: 8
[2025-11-20 23:56:19] Checking for CVMFS
[2025-11-20 23:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:56:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:56:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:56:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:56:22] 2.11.2.0 12000 214518 137028 153098 0 233 16008531 25165824 4608 130560 2 104009576 99.908 40869288 3281 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 23:56:22] CVMFS is ok
[2025-11-20 23:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:56:22] Checking for apptainer binary...
[2025-11-20 23:56:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:56:22] Running /usr/bin/apptainer --version
[2025-11-20 23:56:22] apptainer version 1.3.2-1.el7
[2025-11-20 23:56:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:56:29] cg-vwn246.simple-grid.lan
[2025-11-20 23:56:29] apptainer works
[2025-11-20 23:56:29] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:56:29] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:56:29] Starting ATLAS job with PandaID=6891570092
[2025-11-20 23:56:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 01:34:31]  *** The last 200 lines of the pilot log: ***
[2025-11-22 01:34:31] 2025-11-22 00:33:30,708 | INFO     | time since job start (92030s) is within the limit (172800.0s)
[2025-11-22 01:34:31] 2025-11-22 00:33:31,802 | INFO     | monitor loop #6191: job 0:6891570092 is in state 'finished'
[2025-11-22 01:34:31] 2025-11-22 00:33:31,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:34:31] 2025-11-22 00:33:32,717 | INFO     | time since job start (92032s) is within the limit (172800.0s)
[2025-11-22 01:34:31] 2025-11-22 00:33:34,314 | INFO     | monitor loop #6192: job 0:6891570092 is in state 'finished'
[2025-11-22 01:34:31] 2025-11-22 00:33:34,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:34:31] 2025-11-22 00:33:34,728 | INFO     | time since job start (92034s) is within the limit (172800.0s)
[2025-11-22 01:34:31] 2025-11-22 00:33:36,734 | INFO     | time since job start (92036s) is within the limit (172800.0s)
[2025-11-22 01:34:31] 2025-11-22 00:33:36,826 | INFO     | monitor loop #6193: job 0:6891570092 is in state 'finished'
[2025-11-22 01:34:31] 2025-11-22 00:33:36,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:34:31] 2025-11-22 00:33:38,741 | INFO     | time since job start (92038s) is within the limit (172800.0s)
[2025-11-22 01:34:31] 2025-11-22 00:33:39,331 | INFO     | monitor loop #6194: job 0:6891570092 is in state 'finished'
[2025-11-22 01:34:31] 2025-11-22 00:33:39,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 01:34:31] 2025-11-22 00:33:39,885 | INFO     | PID=16391 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:34:31] 2025-11-22 00:33:39,886 | INFO     | .. there are 9 such processes running
[2025-11-22 01:34:31] 2025-11-22 00:33:40,649 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 01:34:31] 2025-11-22 00:33:40,651 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 01:34:31] 2025-11-22 00:33:40,653 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891570092/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 01:34:31] 2025-11-22 00:33:40,653 | INFO     | extracted standard info from prmon json
[2025-11-22 01:34:31] 2025-11-22 00:33:40,653 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 01:34:31] 2025-11-22 00:33:40,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 01:34:31] 2025-11-22 00:33:40,712 | INFO     | fitting pss+swap vs Time
[2025-11-22 01:34:31] 2025-11-22 00:33:40,715 | INFO     | sum of square deviations: 1044438292085.1268
[2025-11-22 01:34:31] 2025-11-22 00:33:40,812 | INFO     | sum of deviations: 3067743962606.953
[2025-11-22 01:34:31] 2025-11-22 00:33:40,813 | INFO     | mean x: 1763725787.3502336
[2025-11-22 01:34:31] 2025-11-22 00:33:40,813 | INFO     | mean y: 2846471.712474983
[2025-11-22 01:34:31] 2025-11-22 00:33:40,813 | INFO     | intersect: -5177602365.562517
[2025-11-22 01:34:31] 2025-11-22 00:33:40,815 | INFO     | chi2: 22.385341096931413
[2025-11-22 01:34:31] 2025-11-22 00:33:40,817 | INFO     | sum of square deviations: 1034022369903.4813
[2025-11-22 01:34:31] 2025-11-22 00:33:40,876 | INFO     | sum of deviations: 3555014459649.9214
[2025-11-22 01:34:31] 2025-11-22 00:33:40,877 | INFO     | mean x: 1763725634.8547523
[2025-11-22 01:34:31] 2025-11-22 00:33:40,877 | INFO     | mean y: 2853604.700133869
[2025-11-22 01:34:31] 2025-11-22 00:33:40,877 | INFO     | intersect: -6060912825.564956
[2025-11-22 01:34:31] 2025-11-22 00:33:40,879 | INFO     | chi2: 19.2510286177207
[2025-11-22 01:34:31] 2025-11-22 00:33:40,879 | INFO     | current chi2=19.2510286177207 (change=14.001629305708304 %)
[2025-11-22 01:34:31] 2025-11-22 00:33:40,879 | INFO     | right removable region: 1493
[2025-11-22 01:34:31] 2025-11-22 00:33:40,882 | INFO     | sum of square deviations: 1034021135263.4814
[2025-11-22 01:34:31] 2025-11-22 00:33:40,891 | INFO     | time since job start (92040s) is within the limit (172800.0s)
[2025-11-22 01:34:31] 2025-11-22 00:33:40,976 | INFO     | sum of deviations: 2443998402814.9585
[2025-11-22 01:34:31] 2025-11-22 00:33:40,976 | INFO     | mean x: 1763725939.8547523
[2025-11-22 01:34:31] 2025-11-22 00:33:40,976 | INFO     | mean y: 2855602.386880857
[2025-11-22 01:34:31] 2025-11-22 00:33:40,977 | INFO     | intersect: -4165863230.3378935
[2025-11-22 01:34:31] 2025-11-22 00:33:40,978 | INFO     | chi2: 17.842438990016788
[2025-11-22 01:34:31] 2025-11-22 00:33:40,978 | INFO     | current chi2=17.842438990016788 (change=20.29409374305834 %)
[2025-11-22 01:34:31] 2025-11-22 00:33:40,979 | INFO     | left removable region: 10
[2025-11-22 01:34:31] 2025-11-22 00:33:40,981 | INFO     | sum of square deviations: 1011349148031.6426
[2025-11-22 01:34:31] 2025-11-22 00:33:41,051 | INFO     | sum of deviations: 2553310436649.496
[2025-11-22 01:34:31] 2025-11-22 00:33:41,052 | INFO     | mean x: 1763725909.3648012
[2025-11-22 01:34:31] 2025-11-22 00:33:41,052 | INFO     | mean y: 2871552.239379636
[2025-11-22 01:34:31] 2025-11-22 00:33:41,052 | INFO     | intersect: -4449932685.085565
[2025-11-22 01:34:31] 2025-11-22 00:33:41,054 | INFO     | chi2: 11.298832052886393
[2025-11-22 01:34:31] 2025-11-22 00:33:41,054 | INFO     | current memory leak: 2.52 B/s (using 1483 data points, chi2=11.30)
[2025-11-22 01:34:31] 2025-11-22 00:33:41,056 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-22 01:34:31] 2025-11-22 00:33:41,056 | INFO     | ..............................
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . Timing measurements:
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . get job = 0 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . initial setup = 3 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . payload setup = 167 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . stage-in = 0 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . payload execution = 91567 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . stage-out = 6 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | . log creation = 2 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,057 | INFO     | ..............................
[2025-11-22 01:34:31] 2025-11-22 00:33:41,181 | INFO     | 
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | job summary report
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | --------------------------------------------------
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | PanDA job id: 6891570092
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | task id: 47493068
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | errors: (none)
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | pilot state: finished 
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | transexitcode: 0
[2025-11-22 01:34:31] 2025-11-22 00:33:41,182 | INFO     | exeerrorcode: 0
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | exeerrordiag: 
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | exitcode: 0
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | exitmsg: OK
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | cpuconsumptiontime: 341126 s
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | nevents: 1000
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | neventsw: 0
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | pid: 22983
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | pgrp: 22983
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | corecount: 8
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | event service: False
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | sizes: {0: 2297968, 1: 2298653, 2: 2298852, 12: 2298852, 23: 2298880, 34: 2298908, 45: 2299064, 55: 2299092, 66: 2299120, 77: 2299148, 88: 2299204, 90: 2299774, 98
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | --------------------------------------------------
[2025-11-22 01:34:31] 2025-11-22 00:33:41,183 | INFO     | 
[2025-11-22 01:34:31] 2025-11-22 00:33:41,184 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-22 01:34:31] 2025-11-22 00:33:41,777 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,777 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,777 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,777 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,777 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,778 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 01:34:31] 2025-11-22 00:33:41,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,779 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 01:34:31] 2025-11-22 00:33:41,779 | INFO     | job 6891570092 has completed (purged errors)
[2025-11-22 01:34:31] 2025-11-22 00:33:41,779 | INFO     | overall cleanup function is called
[2025-11-22 01:34:31] 2025-11-22 00:33:42,801 | INFO     | --- collectZombieJob: --- 10, [22983]
[2025-11-22 01:34:31] 2025-11-22 00:33:42,801 | INFO     | zombie collector waiting for pid 22983
[2025-11-22 01:34:31] 2025-11-22 00:33:42,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 01:34:31] 2025-11-22 00:33:42,801 | INFO     | collected zombie processes
[2025-11-22 01:34:31] 2025-11-22 00:33:42,802 | INFO     | will attempt to kill all subprocesses of pid=22983
[2025-11-22 01:34:31] 2025-11-22 00:33:42,907 | INFO     | process IDs to be killed: [22983] (in reverse order)
[2025-11-22 01:34:31] 2025-11-22 00:33:43,613 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 01:34:31] 2025-11-22 00:33:43,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 01:34:31] 2025-11-22 00:33:43,617 | INFO     | did not find any defunct processes belonging to 22983
[2025-11-22 01:34:31] 2025-11-22 00:33:43,620 | INFO     | did not find any defunct processes belonging to 22983
[2025-11-22 01:34:31] 2025-11-22 00:33:43,672 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 01:34:31] 2025-11-22 00:33:43,673 | INFO     | ready for new job
[2025-11-22 01:34:31] 2025-11-22 00:33:43,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 01:34:31] 2025-11-22 00:33:43,680 | INFO     | ***************************************
[2025-11-22 01:34:31] 2025-11-22 00:33:43,680 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 01:34:31] 2025-11-22 00:33:43,680 | INFO     | ***************************************
[2025-11-22 01:34:31] 2025-11-22 00:33:43,680 | INFO     | 
[2025-11-22 01:34:31] 2025-11-22 00:33:43,681 | INFO     | pilot is running in a VM
[2025-11-22 01:34:31] 2025-11-22 00:33:43,681 | INFO     | architecture information:
[2025-11-22 01:34:31] 2025-11-22 00:33:43,697 | INFO     | executing command: cat /etc/os-release
[2025-11-22 01:34:31] 2025-11-22 00:33:43,965 | INFO     | cat /etc/os-release:
[2025-11-22 01:34:31] NAME="CentOS Linux"
[2025-11-22 01:34:31] VERSION="7 (Core)"
[2025-11-22 01:34:31] ID="centos"
[2025-11-22 01:34:31] ID_LIKE="rhel fedora"
[2025-11-22 01:34:31] VERSION_ID="7"
[2025-11-22 01:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 01:34:31] ANSI_COLOR="0;31"
[2025-11-22 01:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 01:34:31] HOME_URL="https://www.centos.org/"
[2025-11-22 01:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 01:34:31] 
[2025-11-22 01:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 01:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 01:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 01:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 01:34:31] 
[2025-11-22 01:34:31] 2025-11-22 00:33:43,965 | INFO     | ***************************************
[2025-11-22 01:34:31] 2025-11-22 00:33:44,469 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-22 01:34:31] 2025-11-22 00:33:44,754 | INFO     | sufficient remaining disk space (494953037824 B)
[2025-11-22 01:34:31] 2025-11-22 00:33:44,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 01:34:31] 2025-11-22 00:33:44,755 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 01:34:31] 2025-11-22 00:33:44,755 | INFO     | update_server=False
[2025-11-22 01:34:31] 2025-11-22 00:33:44,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 01:34:31] 2025-11-22 00:33:45,034 | INFO     | all payload control threads have been joined
[2025-11-22 01:34:31] 2025-11-22 00:33:45,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 01:34:31] 2025-11-22 00:33:45,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:34:31] 2025-11-22 00:33:45,353 | INFO     | aborting loop
[2025-11-22 01:34:31] 2025-11-22 00:33:45,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 01:34:31] 2025-11-22 00:33:45,761 | INFO     | [job] retrieve thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:45,763 | INFO     | all data control threads have been joined
[2025-11-22 01:34:31] 2025-11-22 00:33:45,805 | INFO     | [data] copytool_in thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:45,828 | INFO     | [job] validate thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:45,936 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:46,040 | INFO     | [payload] control thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:46,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:34:31] 2025-11-22 00:33:46,208 | INFO     | all job control threads have been joined
[2025-11-22 01:34:31] 2025-11-22 00:33:46,359 | INFO     | [job] job monitor thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:46,497 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:46,527 | INFO     | [payload] failed_post thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:46,769 | INFO     | [data] control thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:47,082 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:47,204 | INFO     | [job] queue monitor thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:47,214 | INFO     | [job] control thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:47,242 | INFO     | [payload] validate_post thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:47,263 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:47,721 | INFO     | [data] copytool_out thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:33:49,303 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 01:34:31] 2025-11-22 00:34:14,110 | INFO     | PID=16391 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:34:31] 2025-11-22 00:34:14,110 | INFO     | .. there are 9 such processes running
[2025-11-22 01:34:31] 2025-11-22 00:34:14,111 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 01:34:31] 2025-11-22 00:34:14,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 01:34:31] 2025-11-22 00:34:14,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 01:34:31] 2025-11-22 00:34:20,910 | INFO     | [monitor] cgroup control has ended
[2025-11-22 01:34:31] 2025-11-22 00:34:22,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306373248832)>', '<ExcThread(monitor, started 140305953179392)>']
[2025-11-22 01:34:31] 2025-11-22 00:34:23,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 01:34:31] 2025-11-22 00:34:23,162 | INFO     | [monitor] control thread has ended
[2025-11-22 01:34:31] 2025-11-22 00:34:27,734 | INFO     | all workflow threads have been joined
[2025-11-22 01:34:31] 2025-11-22 00:34:27,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 01:34:31] 2025-11-22 00:34:27,735 | INFO     | traces error code: 0
[2025-11-22 01:34:31] 2025-11-22 00:34:27,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 01:34:31] 2025-11-22 00:34:28,245 [wrapper] ==== pilot stdout END ====
[2025-11-22 01:34:31] 2025-11-22 00:34:28,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 01:34:31] 2025-11-22 00:34:28,372 [wrapper] pilotpid: 16391
[2025-11-22 01:34:31] 2025-11-22 00:34:28,499 [wrapper] Pilot exit status: 0
[2025-11-22 01:34:31] 2025-11-22 00:34:28,788 [wrapper] pandaids: 6891570092
[2025-11-22 01:34:31] 2025-11-22 00:34:29,409 [wrapper] cleanup supervisor_pilot 27382 16392
[2025-11-22 01:34:31] 2025-11-22 00:34:29,466 [wrapper] Test setup, not cleaning
[2025-11-22 01:34:31] 2025-11-22 00:34:29,531 [wrapper] apfmon messages muted
[2025-11-22 01:34:31] 2025-11-22 00:34:29,597 [wrapper] ==== wrapper stdout END ====
[2025-11-22 01:34:31] 2025-11-22 00:34:29,653 [wrapper] ==== wrapper stderr END ====
[2025-11-22 01:34:31]  *** Error codes and diagnostics ***
[2025-11-22 01:34:31]     "exeErrorCode": 0,
[2025-11-22 01:34:31]     "exeErrorDiag": "",
[2025-11-22 01:34:31]     "pilotErrorCode": 0,
[2025-11-22 01:34:31]     "pilotErrorDiag": "",
[2025-11-22 01:34:31]  *** Listing of results directory ***
[2025-11-22 01:34:31] total 1328836
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:35 queuedata.json
[2025-11-22 01:34:31] -rwx------. 1 boinc boinc     36292 Nov 18 16:38 runpilot2-wrapper.sh
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc       100 Nov 20 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 01:34:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 23:56 run_atlas
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc       105 Nov 20 23:56 job.xml
[2025-11-22 01:34:31] -rw-r--r--. 2 boinc boinc 408204195 Nov 20 23:56 EVNT.47493065._000230.pool.root.1
[2025-11-22 01:34:31] -rw-r--r--. 2 boinc boinc    590101 Nov 20 23:56 input.tar.gz
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc      6390 Nov 20 23:56 init_data.xml
[2025-11-22 01:34:31] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:56 start_atlas.sh
[2025-11-22 01:34:31] drwxrwx--x. 2 boinc boinc        68 Nov 20 23:56 shared
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc         0 Nov 20 23:56 boinc_lockfile
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc      2773 Nov 20 23:56 pandaJob.out
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc    989825 Nov 20 23:59 agis_schedconf.cvmfs.json
[2025-11-22 01:34:31] drwx------. 5 boinc boinc      4096 Nov 20 23:59 pilot3
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc       533 Nov 22 01:05 boinc_task_state.xml
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc 918909688 Nov 22 01:30 HITS.47493068._002296.pool.root.1
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc      1033 Nov 22 01:31 memory_monitor_summary.json
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc   1526164 Nov 22 01:31 agis_ddmendpoints.agis.ALL.json
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc   2575848 Nov 22 01:31 log.47493068._002296.job.log.tgz.1
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc      8629 Nov 22 01:33 heartbeat.json
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc        95 Nov 22 01:34 pilot_heartbeat.json
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc        29 Nov 22 01:34 wrapper_checkpoint.txt
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc      8192 Nov 22 01:34 boinc_mmap_file
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc      4884 Nov 22 01:34 pilotlog.txt
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc  12277141 Nov 22 01:34 log.47493068._002296.job.log.1
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc       353 Nov 22 01:34 output.list
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc       620 Nov 22 01:34 runtime_log
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc  14868480 Nov 22 01:34 result.tar.gz
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc       662 Nov 22 01:34 vi1LDmcxcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0bFKDm7aEU6n.diag
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc      8703 Nov 22 01:34 runtime_log.err
[2025-11-22 01:34:31] -rw-r--r--. 1 boinc boinc     21506 Nov 22 01:34 stderr.txt
[2025-11-22 01:34:31] HITS file was successfully produced:
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc 918909688 Nov 22 01:30 shared/HITS.pool.root.1
[2025-11-22 01:34:31]  *** Contents of shared directory: ***
[2025-11-22 01:34:31] total 1311132
[2025-11-22 01:34:31] -rw-r--r--. 2 boinc boinc 408204195 Nov 20 23:56 ATLAS.root_0
[2025-11-22 01:34:31] -rw-r--r--. 2 boinc boinc    590101 Nov 20 23:56 input.tar.gz
[2025-11-22 01:34:31] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:56 start_atlas.sh
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc 918909688 Nov 22 01:30 HITS.pool.root.1
[2025-11-22 01:34:31] -rw-------. 1 boinc boinc  14868480 Nov 22 01:34 result.tar.gz
01:34:33 (12622): run_atlas exited; CPU time 341608.260761
01:34:33 (12622): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN