Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:30:51 (11756): wrapper (7.7.26015): starting
20:30:51 (11756): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 20:30:51] Arguments: --nthreads 8
[2025-11-21 20:30:51] Threads: 8
[2025-11-21 20:30:51] Checking for CVMFS
[2025-11-21 20:30:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 20:30:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 20:30:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 20:30:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 20:30:54] 2.11.2.0 17816 183574 137068 153141 1 84 14644149 25165824 4632 130560 3 64057066 99.879 31721279 2819 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 20:30:54] CVMFS is ok
[2025-11-21 20:30:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 20:30:54] Checking for apptainer binary...
[2025-11-21 20:30:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 20:30:54] Running /usr/bin/apptainer --version
[2025-11-21 20:30:54] apptainer version 1.3.2-1.el7
[2025-11-21 20:30:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 20:31:07] cg-vwn410.simple-grid.lan
[2025-11-21 20:31:07] apptainer works
[2025-11-21 20:31:07] Set ATHENA_PROC_NUMBER=8
[2025-11-21 20:31:07] Set ATHENA_CORE_NUMBER=8
[2025-11-21 20:31:07] Starting ATLAS job with PandaID=6891569989
[2025-11-21 20:31:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 21:56:35]  *** The last 200 lines of the pilot log: ***
[2025-11-22 21:56:35] 2025-11-22 20:55:36,820 | INFO     | time since job start (91250s) is within the limit (172800.0s)
[2025-11-22 21:56:35] 2025-11-22 20:55:38,743 | INFO     | monitor loop #6147: job 0:6891569989 is in state 'finished'
[2025-11-22 21:56:35] 2025-11-22 20:55:38,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:56:35] 2025-11-22 20:55:38,828 | INFO     | time since job start (91252s) is within the limit (172800.0s)
[2025-11-22 21:56:35] 2025-11-22 20:55:40,841 | INFO     | time since job start (91254s) is within the limit (172800.0s)
[2025-11-22 21:56:35] 2025-11-22 20:55:41,249 | INFO     | monitor loop #6148: job 0:6891569989 is in state 'finished'
[2025-11-22 21:56:35] 2025-11-22 20:55:41,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:56:35] 2025-11-22 20:55:42,058 | INFO     | PID=15532 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 21:56:35] 2025-11-22 20:55:42,058 | INFO     | .. there are 9 such processes running
[2025-11-22 21:56:35] 2025-11-22 20:55:43,059 | INFO     | time since job start (91257s) is within the limit (172800.0s)
[2025-11-22 21:56:35] 2025-11-22 20:55:43,756 | INFO     | monitor loop #6149: job 0:6891569989 is in state 'finished'
[2025-11-22 21:56:35] 2025-11-22 20:55:43,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:56:35] 2025-11-22 20:55:45,070 | INFO     | time since job start (91259s) is within the limit (172800.0s)
[2025-11-22 21:56:35] 2025-11-22 20:55:46,266 | INFO     | monitor loop #6150: job 0:6891569989 is in state 'finished'
[2025-11-22 21:56:35] 2025-11-22 20:55:46,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:56:35] 2025-11-22 20:55:46,889 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 21:56:35] 2025-11-22 20:55:46,890 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 21:56:35] 2025-11-22 20:55:46,892 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891569989/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 21:56:35] 2025-11-22 20:55:46,893 | INFO     | extracted standard info from prmon json
[2025-11-22 21:56:35] 2025-11-22 20:55:46,893 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:56:35] 2025-11-22 20:55:46,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:56:35] 2025-11-22 20:55:46,939 | INFO     | fitting pss+swap vs Time
[2025-11-22 21:56:35] 2025-11-22 20:55:46,941 | INFO     | sum of square deviations: 1021611537299.2007
[2025-11-22 21:56:35] 2025-11-22 20:55:47,050 | INFO     | sum of deviations: 2303996204430.2715
[2025-11-22 21:56:35] 2025-11-22 20:55:47,050 | INFO     | mean x: 1763799429.842742
[2025-11-22 21:56:35] 2025-11-22 20:55:47,050 | INFO     | mean y: 2848654.1592741935
[2025-11-22 21:56:35] 2025-11-22 20:55:47,050 | INFO     | intersect: -3974971724.1004004
[2025-11-22 21:56:35] 2025-11-22 20:55:47,052 | INFO     | chi2: 17.151268895385027
[2025-11-22 21:56:35] 2025-11-22 20:55:47,054 | INFO     | sum of square deviations: 1011348177490.157
[2025-11-22 21:56:35] 2025-11-22 20:55:47,103 | INFO     | time since job start (91261s) is within the limit (172800.0s)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,150 | INFO     | sum of deviations: 2789217363300.6094
[2025-11-22 21:56:35] 2025-11-22 20:55:47,152 | INFO     | mean x: 1763799277.347269
[2025-11-22 21:56:35] 2025-11-22 20:55:47,152 | INFO     | mean y: 2855862.6958867162
[2025-11-22 21:56:35] 2025-11-22 20:55:47,152 | INFO     | intersect: -4861561436.164526
[2025-11-22 21:56:35] 2025-11-22 20:55:47,154 | INFO     | chi2: 13.984592467888556
[2025-11-22 21:56:35] 2025-11-22 20:55:47,154 | INFO     | current chi2=13.984592467888556 (change=18.46321952510781 %)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,154 | INFO     | right removable region: 1482
[2025-11-22 21:56:35] 2025-11-22 20:55:47,156 | INFO     | sum of square deviations: 1011346958710.1578
[2025-11-22 21:56:35] 2025-11-22 20:55:47,219 | INFO     | sum of deviations: 1838060176160.9229
[2025-11-22 21:56:35] 2025-11-22 20:55:47,219 | INFO     | mean x: 1763799582.347269
[2025-11-22 21:56:35] 2025-11-22 20:55:47,220 | INFO     | mean y: 2855573.2292650035
[2025-11-22 21:56:35] 2025-11-22 20:55:47,220 | INFO     | intersect: -3202740432.296372
[2025-11-22 21:56:35] 2025-11-22 20:55:47,221 | INFO     | chi2: 14.514829258498272
[2025-11-22 21:56:35] 2025-11-22 20:55:47,222 | INFO     | current chi2=14.514829258498272 (change=15.371688549505242 %)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,222 | INFO     | left removable region: 10
[2025-11-22 21:56:35] 2025-11-22 20:55:47,224 | INFO     | sum of square deviations: 989009273719.5974
[2025-11-22 21:56:35] 2025-11-22 20:55:47,285 | INFO     | sum of deviations: 2329311446476.286
[2025-11-22 21:56:35] 2025-11-22 20:55:47,286 | INFO     | mean x: 1763799551.8539402
[2025-11-22 21:56:35] 2025-11-22 20:55:47,286 | INFO     | mean y: 2865928.726902174
[2025-11-22 21:56:35] 2025-11-22 20:55:47,286 | INFO     | intersect: -4151229077.856369
[2025-11-22 21:56:35] 2025-11-22 20:55:47,288 | INFO     | chi2: 10.539475307309662
[2025-11-22 21:56:35] 2025-11-22 20:55:47,288 | INFO     | current memory leak: 2.36 B/s (using 1472 data points, chi2=10.54)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,290 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | ..............................
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . Timing measurements:
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . get job = 0 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . initial setup = 7 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . payload setup = 149 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . stage-in = 0 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . payload execution = 90800 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . stage-out = 5 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | . log creation = 2 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,291 | INFO     | ..............................
[2025-11-22 21:56:35] 2025-11-22 20:55:47,415 | INFO     | 
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | job summary report
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | --------------------------------------------------
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | PanDA job id: 6891569989
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | task id: 47493068
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | errors: (none)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | pilot state: finished 
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | transexitcode: 0
[2025-11-22 21:56:35] 2025-11-22 20:55:47,416 | INFO     | exeerrorcode: 0
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | exeerrordiag: 
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | exitcode: 0
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | exitmsg: OK
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | cpuconsumptiontime: 339208 s
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | nevents: 1000
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | neventsw: 0
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | pid: 22115
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | pgrp: 22115
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | corecount: 8
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | event service: False
[2025-11-22 21:56:35] 2025-11-22 20:55:47,417 | INFO     | sizes: {0: 2297968, 1: 2298653, 2: 2298852, 13: 2298852, 24: 2298908, 34: 2298936, 45: 2299092, 56: 2299120, 67: 2299148, 77: 2299176, 88: 2299232, 99: 2299830, 11
[2025-11-22 21:56:35] 2025-11-22 20:55:47,418 | INFO     | --------------------------------------------------
[2025-11-22 21:56:35] 2025-11-22 20:55:47,418 | INFO     | 
[2025-11-22 21:56:35] 2025-11-22 20:55:47,418 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-22 21:56:35] 2025-11-22 20:55:47,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 21:56:35] 2025-11-22 20:55:47,633 | INFO     | job 6891569989 has completed (purged errors)
[2025-11-22 21:56:35] 2025-11-22 20:55:47,634 | INFO     | overall cleanup function is called
[2025-11-22 21:56:35] 2025-11-22 20:55:48,652 | INFO     | --- collectZombieJob: --- 10, [22115]
[2025-11-22 21:56:35] 2025-11-22 20:55:48,652 | INFO     | zombie collector waiting for pid 22115
[2025-11-22 21:56:35] 2025-11-22 20:55:48,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 21:56:35] 2025-11-22 20:55:48,653 | INFO     | collected zombie processes
[2025-11-22 21:56:35] 2025-11-22 20:55:48,653 | INFO     | will attempt to kill all subprocesses of pid=22115
[2025-11-22 21:56:35] 2025-11-22 20:55:48,768 | INFO     | process IDs to be killed: [22115] (in reverse order)
[2025-11-22 21:56:35] 2025-11-22 20:55:49,572 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 21:56:35] 2025-11-22 20:55:49,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 21:56:35] 2025-11-22 20:55:49,576 | INFO     | did not find any defunct processes belonging to 22115
[2025-11-22 21:56:35] 2025-11-22 20:55:49,578 | INFO     | did not find any defunct processes belonging to 22115
[2025-11-22 21:56:35] 2025-11-22 20:55:49,602 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 21:56:35] 2025-11-22 20:55:49,603 | INFO     | ready for new job
[2025-11-22 21:56:35] 2025-11-22 20:55:49,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 21:56:35] 2025-11-22 20:55:49,610 | INFO     | ***************************************
[2025-11-22 21:56:35] 2025-11-22 20:55:49,611 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 21:56:35] 2025-11-22 20:55:49,611 | INFO     | ***************************************
[2025-11-22 21:56:35] 2025-11-22 20:55:49,611 | INFO     | 
[2025-11-22 21:56:35] 2025-11-22 20:55:49,611 | INFO     | pilot is running in a VM
[2025-11-22 21:56:35] 2025-11-22 20:55:49,612 | INFO     | architecture information:
[2025-11-22 21:56:35] 2025-11-22 20:55:49,621 | INFO     | executing command: cat /etc/os-release
[2025-11-22 21:56:35] 2025-11-22 20:55:49,772 | INFO     | cat /etc/os-release:
[2025-11-22 21:56:35] NAME="CentOS Linux"
[2025-11-22 21:56:35] VERSION="7 (Core)"
[2025-11-22 21:56:35] ID="centos"
[2025-11-22 21:56:35] ID_LIKE="rhel fedora"
[2025-11-22 21:56:35] VERSION_ID="7"
[2025-11-22 21:56:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 21:56:35] ANSI_COLOR="0;31"
[2025-11-22 21:56:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 21:56:35] HOME_URL="https://www.centos.org/"
[2025-11-22 21:56:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 21:56:35] 
[2025-11-22 21:56:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 21:56:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 21:56:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 21:56:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 21:56:35] 
[2025-11-22 21:56:35] 2025-11-22 20:55:49,772 | INFO     | ***************************************
[2025-11-22 21:56:35] 2025-11-22 20:55:50,276 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-22 21:56:35] 2025-11-22 20:55:50,539 | INFO     | sufficient remaining disk space (495108227072 B)
[2025-11-22 21:56:35] 2025-11-22 20:55:50,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 21:56:35] 2025-11-22 20:55:50,540 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 21:56:35] 2025-11-22 20:55:50,540 | INFO     | update_server=False
[2025-11-22 21:56:35] 2025-11-22 20:55:50,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 21:56:35] 2025-11-22 20:55:50,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:56:35] 2025-11-22 20:55:50,541 | INFO     | aborting loop
[2025-11-22 21:56:35] 2025-11-22 20:55:50,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 21:56:35] 2025-11-22 20:55:50,725 | INFO     | all payload control threads have been joined
[2025-11-22 21:56:35] 2025-11-22 20:55:50,977 | INFO     | all data control threads have been joined
[2025-11-22 21:56:35] 2025-11-22 20:55:51,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 21:56:35] 2025-11-22 20:55:51,546 | INFO     | [job] retrieve thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:51,547 | INFO     | [job] job monitor thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:51,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:51,712 | INFO     | all job control threads have been joined
[2025-11-22 21:56:35] 2025-11-22 20:55:51,731 | INFO     | [payload] control thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:51,932 | INFO     | [data] copytool_in thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:51,981 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:51,983 | INFO     | [data] control thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:52,242 | INFO     | [payload] failed_post thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:52,281 | INFO     | [payload] validate_post thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:52,353 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:52,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:56:35] 2025-11-22 20:55:52,561 | INFO     | [job] validate thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:52,591 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:52,718 | INFO     | [job] control thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:53,445 | INFO     | [job] queue monitor thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:53,484 | INFO     | [data] copytool_out thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:55:54,556 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 21:56:35] 2025-11-22 20:56:20,274 | INFO     | PID=15532 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 21:56:35] 2025-11-22 20:56:20,274 | INFO     | .. there are 9 such processes running
[2025-11-22 21:56:35] 2025-11-22 20:56:20,274 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 21:56:35] 2025-11-22 20:56:20,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 21:56:35] 2025-11-22 20:56:20,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 21:56:35] 2025-11-22 20:56:24,795 | INFO     | [monitor] cgroup control has ended
[2025-11-22 21:56:35] 2025-11-22 20:56:26,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708760774464)>', '<ExcThread(monitor, started 140708312749824)>']
[2025-11-22 21:56:35] 2025-11-22 20:56:27,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 21:56:35] 2025-11-22 20:56:27,316 | INFO     | [monitor] control thread has ended
[2025-11-22 21:56:35] 2025-11-22 20:56:31,519 | INFO     | all workflow threads have been joined
[2025-11-22 21:56:35] 2025-11-22 20:56:31,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 21:56:35] 2025-11-22 20:56:31,520 | INFO     | traces error code: 0
[2025-11-22 21:56:35] 2025-11-22 20:56:31,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 21:56:35] 2025-11-22 20:56:31,896 [wrapper] ==== pilot stdout END ====
[2025-11-22 21:56:35] 2025-11-22 20:56:31,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 21:56:35] 2025-11-22 20:56:32,069 [wrapper] pilotpid: 15532
[2025-11-22 21:56:35] 2025-11-22 20:56:32,156 [wrapper] Pilot exit status: 0
[2025-11-22 21:56:35] 2025-11-22 20:56:32,498 [wrapper] pandaids: 6891569989
[2025-11-22 21:56:35] 2025-11-22 20:56:33,298 [wrapper] cleanup supervisor_pilot 29955 15533
[2025-11-22 21:56:35] 2025-11-22 20:56:33,339 [wrapper] Test setup, not cleaning
[2025-11-22 21:56:35] 2025-11-22 20:56:33,372 [wrapper] apfmon messages muted
[2025-11-22 21:56:35] 2025-11-22 20:56:33,455 [wrapper] ==== wrapper stdout END ====
[2025-11-22 21:56:35] 2025-11-22 20:56:33,506 [wrapper] ==== wrapper stderr END ====
[2025-11-22 21:56:35]  *** Error codes and diagnostics ***
[2025-11-22 21:56:35]     "exeErrorCode": 0,
[2025-11-22 21:56:35]     "exeErrorDiag": "",
[2025-11-22 21:56:35]     "pilotErrorCode": 0,
[2025-11-22 21:56:35]     "pilotErrorDiag": "",
[2025-11-22 21:56:35]  *** Listing of results directory ***
[2025-11-22 21:56:35] total 1331936
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:35 queuedata.json
[2025-11-22 21:56:35] -rwx------. 1 boinc boinc     36292 Nov 18 16:37 runpilot2-wrapper.sh
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc       100 Nov 21 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 21:56:35] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 20:30 run_atlas
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc       105 Nov 21 20:30 job.xml
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc      6391 Nov 21 20:30 init_data.xml
[2025-11-22 21:56:35] -rw-r--r--. 2 boinc boinc 409921119 Nov 21 20:30 EVNT.47493065._000226.pool.root.1
[2025-11-22 21:56:35] -rw-r--r--. 2 boinc boinc     15120 Nov 21 20:30 start_atlas.sh
[2025-11-22 21:56:35] drwxrwx--x. 2 boinc boinc        68 Nov 21 20:30 shared
[2025-11-22 21:56:35] -rw-r--r--. 2 boinc boinc    590102 Nov 21 20:30 input.tar.gz
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc         0 Nov 21 20:30 boinc_lockfile
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc      2773 Nov 21 20:31 pandaJob.out
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc    989798 Nov 21 20:34 agis_schedconf.cvmfs.json
[2025-11-22 21:56:35] drwx------. 5 boinc boinc      4096 Nov 21 20:34 pilot3
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc       533 Nov 22 21:26 boinc_task_state.xml
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc 920720440 Nov 22 21:52 HITS.47493068._002254.pool.root.1
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc      1031 Nov 22 21:53 memory_monitor_summary.json
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc   1526164 Nov 22 21:54 agis_ddmendpoints.agis.ALL.json
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc   2552605 Nov 22 21:54 log.47493068._002254.job.log.tgz.1
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc        95 Nov 22 21:55 pilot_heartbeat.json
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc      8641 Nov 22 21:55 heartbeat.json
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc      8192 Nov 22 21:56 boinc_mmap_file
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc        29 Nov 22 21:56 wrapper_checkpoint.txt
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc      4884 Nov 22 21:56 pilotlog.txt
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc  12118268 Nov 22 21:56 log.47493068._002254.job.log.1
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc       353 Nov 22 21:56 output.list
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc       620 Nov 22 21:56 runtime_log
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc  14694400 Nov 22 21:56 result.tar.gz
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc      8703 Nov 22 21:56 runtime_log.err
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc       662 Nov 22 21:56 ePwMDmpwcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiaFKDm0ogMBo.diag
[2025-11-22 21:56:35] -rw-r--r--. 1 boinc boinc     21507 Nov 22 21:56 stderr.txt
[2025-11-22 21:56:35] HITS file was successfully produced:
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc 920720440 Nov 22 21:52 shared/HITS.pool.root.1
[2025-11-22 21:56:35]  *** Contents of shared directory: ***
[2025-11-22 21:56:35] total 1314408
[2025-11-22 21:56:35] -rw-r--r--. 2 boinc boinc 409921119 Nov 21 20:30 ATLAS.root_0
[2025-11-22 21:56:35] -rw-r--r--. 2 boinc boinc     15120 Nov 21 20:30 start_atlas.sh
[2025-11-22 21:56:35] -rw-r--r--. 2 boinc boinc    590102 Nov 21 20:30 input.tar.gz
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc 920720440 Nov 22 21:52 HITS.pool.root.1
[2025-11-22 21:56:35] -rw-------. 1 boinc boinc  14694400 Nov 22 21:56 result.tar.gz
21:56:37 (11756): run_atlas exited; CPU time 339686.311507
21:56:37 (11756): called boinc_finish(0)

</stderr_txt>
]]>

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