Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:13:46 (2570): wrapper (7.7.26015): starting
21:13:46 (2570): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:13:47] Arguments: --nthreads 8
[2025-11-21 21:13:47] Threads: 8
[2025-11-21 21:13:47] Checking for CVMFS
[2025-11-21 21:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:13:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:13:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:13:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:13:49] 2.11.2.0 24942 76785 91064 153141 1 294 14919190 25165825 4581 130560 6 21250478 99.891 11403107 1891 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 21:13:49] CVMFS is ok
[2025-11-21 21:13:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:13:49] Checking for apptainer binary...
[2025-11-21 21:13:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:13:49] Running /usr/bin/apptainer --version
[2025-11-21 21:13:50] apptainer version 1.3.2-1.el7
[2025-11-21 21:13:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:13:55] cg-vwn352.simple-grid.lan
[2025-11-21 21:13:55] apptainer works
[2025-11-21 21:13:55] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:13:55] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:13:56] Starting ATLAS job with PandaID=6891567070
[2025-11-21 21:13:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:33:37]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:33:37] 2025-11-22 22:32:24,373 | INFO     | monitor loop #6352: job 0:6891567070 is in state 'finished'
[2025-11-22 23:33:37] 2025-11-22 22:32:24,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:33:37] 2025-11-22 22:32:24,795 | INFO     | time since job start (94482s) is within the limit (172800.0s)
[2025-11-22 23:33:37] 2025-11-22 22:32:26,807 | INFO     | time since job start (94484s) is within the limit (172800.0s)
[2025-11-22 23:33:37] 2025-11-22 22:32:26,883 | INFO     | monitor loop #6353: job 0:6891567070 is in state 'finished'
[2025-11-22 23:33:37] 2025-11-22 22:32:26,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:33:37] 2025-11-22 22:32:28,817 | INFO     | time since job start (94486s) is within the limit (172800.0s)
[2025-11-22 23:33:37] 2025-11-22 22:32:29,389 | INFO     | monitor loop #6354: job 0:6891567070 is in state 'finished'
[2025-11-22 23:33:37] 2025-11-22 22:32:29,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:33:37] 2025-11-22 22:32:30,829 | INFO     | time since job start (94488s) is within the limit (172800.0s)
[2025-11-22 23:33:37] 2025-11-22 22:32:31,899 | INFO     | monitor loop #6355: job 0:6891567070 is in state 'finished'
[2025-11-22 23:33:37] 2025-11-22 22:32:31,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:33:37] 2025-11-22 22:32:32,836 | INFO     | time since job start (94490s) is within the limit (172800.0s)
[2025-11-22 23:33:37] 2025-11-22 22:32:34,403 | INFO     | monitor loop #6356: job 0:6891567070 is in state 'finished'
[2025-11-22 23:33:37] 2025-11-22 22:32:34,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:33:37] 2025-11-22 22:32:34,845 | INFO     | time since job start (94492s) is within the limit (172800.0s)
[2025-11-22 23:33:37] 2025-11-22 22:32:35,665 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 23:33:37] 2025-11-22 22:32:35,667 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 23:33:37] 2025-11-22 22:32:35,670 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6891567070/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:33:37] 2025-11-22 22:32:35,671 | INFO     | extracted standard info from prmon json
[2025-11-22 23:33:37] 2025-11-22 22:32:35,671 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:33:37] 2025-11-22 22:32:35,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:33:37] 2025-11-22 22:32:35,700 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:33:37] 2025-11-22 22:32:35,703 | INFO     | sum of square deviations: 1130300566279.158
[2025-11-22 23:33:37] 2025-11-22 22:32:35,772 | INFO     | sum of deviations: 4098759658795.78
[2025-11-22 23:33:37] 2025-11-22 22:32:35,773 | INFO     | mean x: 1763803713.134503
[2025-11-22 23:33:37] 2025-11-22 22:32:35,773 | INFO     | mean y: 2840143.049382716
[2025-11-22 23:33:37] 2025-11-22 22:32:35,773 | INFO     | intersect: -6393164354.43435
[2025-11-22 23:33:37] 2025-11-22 22:32:35,775 | INFO     | chi2: 26.644650152640043
[2025-11-22 23:33:37] 2025-11-22 22:32:35,778 | INFO     | sum of square deviations: 1119320269660.2034
[2025-11-22 23:33:37] 2025-11-22 22:32:35,841 | INFO     | sum of deviations: 4593621254452.354
[2025-11-22 23:33:37] 2025-11-22 22:32:35,842 | INFO     | mean x: 1763803560.6382008
[2025-11-22 23:33:37] 2025-11-22 22:32:35,842 | INFO     | mean y: 2847014.748370274
[2025-11-22 23:33:37] 2025-11-22 22:32:35,842 | INFO     | intersect: -7235693860.854652
[2025-11-22 23:33:37] 2025-11-22 22:32:35,844 | INFO     | chi2: 23.58936608167844
[2025-11-22 23:33:37] 2025-11-22 22:32:35,844 | INFO     | current chi2=23.58936608167844 (change=11.466782462740937 %)
[2025-11-22 23:33:37] 2025-11-22 22:32:35,844 | INFO     | right removable region: 1533
[2025-11-22 23:33:37] 2025-11-22 22:32:35,846 | INFO     | sum of square deviations: 1119319204600.201
[2025-11-22 23:33:37] 2025-11-22 22:32:35,937 | INFO     | sum of deviations: 3450094222580.9756
[2025-11-22 23:33:37] 2025-11-22 22:32:35,943 | INFO     | mean x: 1763803865.6382008
[2025-11-22 23:33:37] 2025-11-22 22:32:35,943 | INFO     | mean y: 2849150.9458930898
[2025-11-22 23:33:37] 2025-11-22 22:32:35,943 | INFO     | intersect: -5433749722.364688
[2025-11-22 23:33:37] 2025-11-22 22:32:35,945 | INFO     | chi2: 21.857292737368972
[2025-11-22 23:33:37] 2025-11-22 22:32:35,946 | INFO     | current chi2=21.857292737368972 (change=17.96742455932274 %)
[2025-11-22 23:33:37] 2025-11-22 22:32:35,946 | INFO     | left removable region: 10
[2025-11-22 23:33:37] 2025-11-22 22:32:35,948 | INFO     | sum of square deviations: 1095412312146.3501
[2025-11-22 23:33:37] 2025-11-22 22:32:36,024 | INFO     | sum of deviations: 3480299191659.0806
[2025-11-22 23:33:37] 2025-11-22 22:32:36,025 | INFO     | mean x: 1763803835.1464214
[2025-11-22 23:33:37] 2025-11-22 22:32:36,025 | INFO     | mean y: 2865587.5108338804
[2025-11-22 23:33:37] 2025-11-22 22:32:36,025 | INFO     | intersect: -5601019811.291537
[2025-11-22 23:33:37] 2025-11-22 22:32:36,027 | INFO     | chi2: 14.475685133614018
[2025-11-22 23:33:37] 2025-11-22 22:32:36,027 | INFO     | current memory leak: 3.18 B/s (using 1523 data points, chi2=14.48)
[2025-11-22 23:33:37] 2025-11-22 22:32:36,036 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-22 23:33:37] 2025-11-22 22:32:36,042 | INFO     | ..............................
[2025-11-22 23:33:37] 2025-11-22 22:32:36,042 | INFO     | . Timing measurements:
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | . get job = 0 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | . initial setup = 10 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | . payload setup = 181 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | . stage-in = 0 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | . payload execution = 94002 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | . stage-out = 5 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | . log creation = 2 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,043 | INFO     | ..............................
[2025-11-22 23:33:37] 2025-11-22 22:32:36,257 | INFO     | 
[2025-11-22 23:33:37] 2025-11-22 22:32:36,257 | INFO     | job summary report
[2025-11-22 23:33:37] 2025-11-22 22:32:36,257 | INFO     | --------------------------------------------------
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | PanDA job id: 6891567070
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | task id: 47493068
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | errors: (none)
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | pilot state: finished 
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | transexitcode: 0
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | exeerrorcode: 0
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | exeerrordiag: 
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | exitcode: 0
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | exitmsg: OK
[2025-11-22 23:33:37] 2025-11-22 22:32:36,258 | INFO     | cpuconsumptiontime: 346167 s
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | nevents: 1000
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | neventsw: 0
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | pid: 12969
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | pgrp: 12969
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | corecount: 8
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | event service: False
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | sizes: {0: 2298625, 1: 2298824, 2: 2298824, 12: 2298852, 23: 2298880, 34: 2298908, 44: 2299064, 55: 2299092, 66: 2299120, 77: 2299148, 88: 2299204, 98: 2299512, 99
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | --------------------------------------------------
[2025-11-22 23:33:37] 2025-11-22 22:32:36,259 | INFO     | 
[2025-11-22 23:33:37] 2025-11-22 22:32:36,260 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-22 23:33:37] 2025-11-22 22:32:36,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:33:37] 2025-11-22 22:32:36,568 | INFO     | job 6891567070 has completed (purged errors)
[2025-11-22 23:33:37] 2025-11-22 22:32:36,568 | INFO     | overall cleanup function is called
[2025-11-22 23:33:37] 2025-11-22 22:32:37,593 | INFO     | --- collectZombieJob: --- 10, [12969]
[2025-11-22 23:33:37] 2025-11-22 22:32:37,593 | INFO     | zombie collector waiting for pid 12969
[2025-11-22 23:33:37] 2025-11-22 22:32:37,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:33:37] 2025-11-22 22:32:37,593 | INFO     | collected zombie processes
[2025-11-22 23:33:37] 2025-11-22 22:32:37,593 | INFO     | will attempt to kill all subprocesses of pid=12969
[2025-11-22 23:33:37] 2025-11-22 22:32:37,721 | INFO     | process IDs to be killed: [12969] (in reverse order)
[2025-11-22 23:33:37] 2025-11-22 22:32:38,636 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:33:37] 2025-11-22 22:32:38,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:33:37] 2025-11-22 22:32:38,640 | INFO     | did not find any defunct processes belonging to 12969
[2025-11-22 23:33:37] 2025-11-22 22:32:38,644 | INFO     | did not find any defunct processes belonging to 12969
[2025-11-22 23:33:37] 2025-11-22 22:32:38,761 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:33:37] 2025-11-22 22:32:38,762 | INFO     | ready for new job
[2025-11-22 23:33:37] 2025-11-22 22:32:38,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:33:37] 2025-11-22 22:32:38,770 | INFO     | ***************************************
[2025-11-22 23:33:37] 2025-11-22 22:32:38,770 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:33:37] 2025-11-22 22:32:38,770 | INFO     | ***************************************
[2025-11-22 23:33:37] 2025-11-22 22:32:38,770 | INFO     | 
[2025-11-22 23:33:37] 2025-11-22 22:32:38,771 | INFO     | pilot is running in a VM
[2025-11-22 23:33:37] 2025-11-22 22:32:38,771 | INFO     | architecture information:
[2025-11-22 23:33:37] 2025-11-22 22:32:38,773 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:33:37] 2025-11-22 22:32:39,046 | INFO     | cat /etc/os-release:
[2025-11-22 23:33:37] NAME="CentOS Linux"
[2025-11-22 23:33:37] VERSION="7 (Core)"
[2025-11-22 23:33:37] ID="centos"
[2025-11-22 23:33:37] ID_LIKE="rhel fedora"
[2025-11-22 23:33:37] VERSION_ID="7"
[2025-11-22 23:33:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:33:37] ANSI_COLOR="0;31"
[2025-11-22 23:33:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:33:37] HOME_URL="https://www.centos.org/"
[2025-11-22 23:33:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:33:37] 
[2025-11-22 23:33:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:33:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:33:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:33:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:33:37] 
[2025-11-22 23:33:37] 2025-11-22 22:32:39,047 | INFO     | ***************************************
[2025-11-22 23:33:37] 2025-11-22 22:32:39,551 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-22 23:33:37] 2025-11-22 22:32:39,785 | INFO     | sufficient remaining disk space (494926823424 B)
[2025-11-22 23:33:37] 2025-11-22 22:32:39,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:33:37] 2025-11-22 22:32:39,786 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:33:37] 2025-11-22 22:32:39,786 | INFO     | update_server=False
[2025-11-22 23:33:37] 2025-11-22 22:32:39,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:33:37] 2025-11-22 22:32:40,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:33:37] 2025-11-22 22:32:40,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:33:37] 2025-11-22 22:32:40,422 | INFO     | aborting loop
[2025-11-22 23:33:37] 2025-11-22 22:32:40,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:33:37] 2025-11-22 22:32:40,459 | INFO     | all job control threads have been joined
[2025-11-22 23:33:37] 2025-11-22 22:32:40,557 | INFO     | all payload control threads have been joined
[2025-11-22 23:33:37] 2025-11-22 22:32:40,565 | INFO     | all data control threads have been joined
[2025-11-22 23:33:37] 2025-11-22 22:32:40,792 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:33:37] 2025-11-22 22:32:41,428 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,465 | INFO     | [job] control thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,563 | INFO     | [payload] control thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,571 | INFO     | [data] control thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,896 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,899 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,904 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,914 | INFO     | [job] validate thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,949 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:41,981 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:42,126 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:42,278 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:42,303 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:32:44,443 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:33:37] 2025-11-22 22:33:08,056 | INFO     | PID=6326 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 23:33:37] 2025-11-22 22:33:08,056 | INFO     | .. there are 9 such processes running
[2025-11-22 23:33:37] 2025-11-22 22:33:08,058 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:33:37] 2025-11-22 22:33:08,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:33:37] 2025-11-22 22:33:08,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:33:37] 2025-11-22 22:33:27,203 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:33:37] 2025-11-22 22:33:27,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970774751040)>', '<ExcThread(monitor, started 139970341750528)>']
[2025-11-22 23:33:37] 2025-11-22 22:33:28,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:33:37] 2025-11-22 22:33:28,177 | INFO     | [monitor] control thread has ended
[2025-11-22 23:33:37] 2025-11-22 22:33:32,521 | INFO     | all workflow threads have been joined
[2025-11-22 23:33:37] 2025-11-22 22:33:32,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:33:37] 2025-11-22 22:33:32,522 | INFO     | traces error code: 0
[2025-11-22 23:33:37] 2025-11-22 22:33:32,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:33:37] 2025-11-22 22:33:32,992 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:33:37] 2025-11-22 22:33:33,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:33:37] 2025-11-22 22:33:33,272 [wrapper] pilotpid: 6326
[2025-11-22 23:33:37] 2025-11-22 22:33:33,384 [wrapper] Pilot exit status: 0
[2025-11-22 23:33:37] 2025-11-22 22:33:33,735 [wrapper] pandaids: 6891567070
[2025-11-22 23:33:37] 2025-11-22 22:33:34,717 [wrapper] cleanup supervisor_pilot  5556 6327
[2025-11-22 23:33:37] 2025-11-22 22:33:34,830 [wrapper] Test setup, not cleaning
[2025-11-22 23:33:37] 2025-11-22 22:33:34,954 [wrapper] apfmon messages muted
[2025-11-22 23:33:37] 2025-11-22 22:33:35,062 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:33:37] 2025-11-22 22:33:35,152 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:33:37]  *** Error codes and diagnostics ***
[2025-11-22 23:33:37]     "exeErrorCode": 0,
[2025-11-22 23:33:37]     "exeErrorDiag": "",
[2025-11-22 23:33:37]     "pilotErrorCode": 0,
[2025-11-22 23:33:37]     "pilotErrorDiag": "",
[2025-11-22 23:33:37]  *** Listing of results directory ***
[2025-11-22 23:33:37] total 1342956
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:32 queuedata.json
[2025-11-22 23:33:37] -rwx------. 1 boinc boinc     36292 Nov 18 16:33 runpilot2-wrapper.sh
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc       100 Nov 21 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:33:37] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 21:13 run_atlas
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc       105 Nov 21 21:13 job.xml
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc      6391 Nov 21 21:13 init_data.xml
[2025-11-22 23:33:37] -rw-r--r--. 2 boinc boinc 408293956 Nov 21 21:13 EVNT.47493065._000160.pool.root.1
[2025-11-22 23:33:37] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:13 start_atlas.sh
[2025-11-22 23:33:37] drwxrwx--x. 2 boinc boinc        68 Nov 21 21:13 shared
[2025-11-22 23:33:37] -rw-r--r--. 2 boinc boinc    590098 Nov 21 21:13 input.tar.gz
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc         0 Nov 21 21:13 boinc_lockfile
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc      2773 Nov 21 21:13 pandaJob.out
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc    989798 Nov 21 21:17 agis_schedconf.cvmfs.json
[2025-11-22 23:33:37] drwx------. 5 boinc boinc      4096 Nov 21 21:17 pilot3
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc       533 Nov 22 23:04 boinc_task_state.xml
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc 932629917 Nov 22 23:29 HITS.47493068._001600.pool.root.1
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc      1030 Nov 22 23:30 memory_monitor_summary.json
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc   1526164 Nov 22 23:30 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc   2600936 Nov 22 23:30 log.47493068._001600.job.log.tgz.1
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc      7949 Nov 22 23:32 heartbeat.json
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc        95 Nov 22 23:33 pilot_heartbeat.json
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc      4883 Nov 22 23:33 pilotlog.txt
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc  12579969 Nov 22 23:33 log.47493068._001600.job.log.1
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc       353 Nov 22 23:33 output.list
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc       620 Nov 22 23:33 runtime_log
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc  15196160 Nov 22 23:33 result.tar.gz
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc      8703 Nov 22 23:33 runtime_log.err
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc       662 Nov 22 23:33 IUCNDmWtcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjVFKDmFSGOjn.diag
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc      8192 Nov 22 23:33 boinc_mmap_file
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc        29 Nov 22 23:33 wrapper_checkpoint.txt
[2025-11-22 23:33:37] -rw-r--r--. 1 boinc boinc     21436 Nov 22 23:33 stderr.txt
[2025-11-22 23:33:37] HITS file was successfully produced:
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc 932629917 Nov 22 23:29 shared/HITS.pool.root.1
[2025-11-22 23:33:37]  *** Contents of shared directory: ***
[2025-11-22 23:33:37] total 1324936
[2025-11-22 23:33:37] -rw-r--r--. 2 boinc boinc 408293956 Nov 21 21:13 ATLAS.root_0
[2025-11-22 23:33:37] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:13 start_atlas.sh
[2025-11-22 23:33:37] -rw-r--r--. 2 boinc boinc    590098 Nov 21 21:13 input.tar.gz
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc 932629917 Nov 22 23:29 HITS.pool.root.1
[2025-11-22 23:33:37] -rw-------. 1 boinc boinc  15196160 Nov 22 23:33 result.tar.gz
23:33:39 (2570): run_atlas exited; CPU time 346858.790646
23:33:39 (2570): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN