Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:25 (4182959): wrapper (7.7.26015): starting
19:36:25 (4182959): wrapper: running run_atlas (--nthreads 3)
[2025-11-18 19:36:25] Arguments: --nthreads 3
[2025-11-18 19:36:25] Threads: 3
[2025-11-18 19:36:25] Checking for CVMFS
[2025-11-18 19:36:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 19:36:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 19:36:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 19:36:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 19:36:26] 2.9.2.0 4099368 17 50916 153010 2 88 34141592 36864001 0 130560 0 250503 99.453 132160 7369 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-18 19:36:26] CVMFS is ok
[2025-11-18 19:36:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 19:36:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 19:36:26] Further information can be found at the LHC@home message board.
[2025-11-18 19:36:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 19:36:26] Checking for apptainer binary...
[2025-11-18 19:36:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 19:36:26] Running /usr/bin/apptainer --version
[2025-11-18 19:36:26] apptainer version 1.4.1-1.1
[2025-11-18 19:36:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 19:36:26] thA335
[2025-11-18 19:36:26] apptainer works
[2025-11-18 19:36:26] Set ATHENA_PROC_NUMBER=3
[2025-11-18 19:36:26] Set ATHENA_CORE_NUMBER=3
[2025-11-18 19:36:26] Starting ATLAS job with PandaID=6891567700
[2025-11-18 19:36:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-18 19:40:46]  *** The last 200 lines of the pilot log: ***
[2025-11-18 19:40:46] 2025-11-18 18:39:56,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-18 19:40:46] 2025-11-18 18:39:56,977 | INFO     | current server update state: UPDATING_FINAL
[2025-11-18 19:40:46] 2025-11-18 18:39:56,977 | INFO     | update_server=False
[2025-11-18 19:40:46] 2025-11-18 18:39:56,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-18 19:40:46] 2025-11-18 18:39:56,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-18 19:40:46] 2025-11-18 18:39:56,977 | INFO     | aborting loop
[2025-11-18 19:40:46] 2025-11-18 18:39:56,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-18 19:40:46] 2025-11-18 18:39:56,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-18 19:40:46] 2025-11-18 18:39:57,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-18 19:40:46] 2025-11-18 18:39:57,269 | INFO     | all data control threads have been joined
[2025-11-18 19:40:46] 2025-11-18 18:39:57,691 | INFO     | all job control threads have been joined
[2025-11-18 19:40:46] 2025-11-18 18:39:57,983 | INFO     | [job] job monitor thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:57,984 | INFO     | [job] retrieve thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:57,984 | INFO     | [job] queue monitor thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:58,024 | INFO     | [payload] validate_pre thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:58,276 | INFO     | [data] control thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:58,440 | INFO     | all payload control threads have been joined
[2025-11-18 19:40:46] 2025-11-18 18:39:58,456 | INFO     | [payload] execute_payloads thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:58,697 | INFO     | [job] control thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:58,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:58,983 | INFO     | [data] copytool_out thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:59,033 | INFO     | [payload] failed_post thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:59,215 | INFO     | [payload] validate_post thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:59,393 | INFO     | [job] validate thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:59,442 | INFO     | [data] copytool_in thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:59,446 | INFO     | [payload] control thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:39:59,466 | INFO     | [job] create_data_payload thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:40:01,071 | INFO     | [data] queue_monitor thread has finished
[2025-11-18 19:40:46] 2025-11-18 18:40:26,624 | INFO     | PID=4186691 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-18 19:40:46] 2025-11-18 18:40:26,624 | INFO     | found 0 job(s) in 20 queues
[2025-11-18 19:40:46] 2025-11-18 18:40:26,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-18 19:40:46] 2025-11-18 18:40:26,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-18 19:40:46] 2025-11-18 18:40:39,615 | INFO     | [monitor] cgroup control has ended
[2025-11-18 19:40:46] 2025-11-18 18:40:41,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252683376448)>', '<ExcThread(monitor, started 140252173801216)>']
[2025-11-18 19:40:46] 2025-11-18 18:40:41,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-18 19:40:46] 2025-11-18 18:40:41,703 | INFO     | [monitor] control thread has ended
[2025-11-18 19:40:46] 2025-11-18 18:40:46,273 | INFO     | all workflow threads have been joined
[2025-11-18 19:40:46] 2025-11-18 18:40:46,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-18 19:40:46] 2025-11-18 18:40:46,274 | INFO     | traces error code: 0
[2025-11-18 19:40:46] 2025-11-18 18:40:46,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-18 19:40:46] 2025-11-18 18:40:46,320 [wrapper] ==== pilot stdout END ====
[2025-11-18 19:40:46] 2025-11-18 18:40:46,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-18 19:40:46] 2025-11-18 18:40:46,327 [wrapper] pilotpid: 4186691
[2025-11-18 19:40:46] 2025-11-18 18:40:46,330 [wrapper] Pilot exit status: 0
[2025-11-18 19:40:46] 2025-11-18 18:40:46,337 [wrapper] pandaids: 6891567700
[2025-11-18 19:40:46] 2025-11-18 18:40:46,353 [wrapper] cleanup supervisor_pilot 4186697 4186692
[2025-11-18 19:40:46] 2025-11-18 18:40:46,356 [wrapper] Test setup, not cleaning
[2025-11-18 19:40:46] 2025-11-18 18:40:46,359 [wrapper] apfmon messages muted
[2025-11-18 19:40:46] 2025-11-18 18:40:46,361 [wrapper] ==== wrapper stdout END ====
[2025-11-18 19:40:46] 2025-11-18 18:40:46,364 [wrapper] ==== wrapper stderr END ====
[2025-11-18 19:40:46]  *** Error codes and diagnostics ***
[2025-11-18 19:40:46]     "exeErrorCode": 65,
[2025-11-18 19:40:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-18 19:40:46]     "pilotErrorCode": 1305,
[2025-11-18 19:40:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-18 19:40:46]  *** Listing of results directory ***
[2025-11-18 19:40:46] total 404548
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:32 queuedata.json
[2025-11-18 19:40:46] -rwx------ 1 boinc boinc     36292 Nov 18 16:33 runpilot2-wrapper.sh
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc       100 Nov 18 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-18 19:40:46] -rwxr-xr-x 1 boinc boinc      7986 Nov 18 19:36 run_atlas
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc       105 Nov 18 19:36 job.xml
[2025-11-18 19:40:46] -rw-r--r-- 2 boinc boinc 410063972 Nov 18 19:36 EVNT.47493065._000167.pool.root.1
[2025-11-18 19:40:46] drwxrwx--x 2 boinc boinc      4096 Nov 18 19:36 shared
[2025-11-18 19:40:46] -rw-r--r-- 2 boinc boinc    590098 Nov 18 19:36 input.tar.gz
[2025-11-18 19:40:46] -rw-r--r-- 2 boinc boinc     15120 Nov 18 19:36 start_atlas.sh
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc         0 Nov 18 19:36 boinc_setup_complete
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc      6193 Nov 18 19:36 init_data.xml
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc         0 Nov 18 19:36 boinc_lockfile
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc      2773 Nov 18 19:36 pandaJob.out
[2025-11-18 19:40:46] -rw------- 1 boinc boinc    992798 Nov 18 19:36 agis_schedconf.cvmfs.json
[2025-11-18 19:40:46] -rw------- 1 boinc boinc   1525063 Nov 18 19:36 agis_ddmendpoints.agis.ALL.json
[2025-11-18 19:40:46] drwx------ 5 boinc boinc      4096 Nov 18 19:36 pilot3
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc       522 Nov 18 19:37 boinc_task_state.xml
[2025-11-18 19:40:46] -rw------- 1 boinc boinc       959 Nov 18 19:37 memory_monitor_summary.json
[2025-11-18 19:40:46] -rw------- 1 boinc boinc     55752 Nov 18 19:37 log.47493068._001669.job.log.tgz.1
[2025-11-18 19:40:46] -rw------- 1 boinc boinc        95 Nov 18 19:39 pilot_heartbeat.json
[2025-11-18 19:40:46] -rw------- 1 boinc boinc      8412 Nov 18 19:39 heartbeat.json
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc      8192 Nov 18 19:40 boinc_mmap_file
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc        22 Nov 18 19:40 wrapper_checkpoint.txt
[2025-11-18 19:40:46] -rw------- 1 boinc boinc      4752 Nov 18 19:40 pilotlog.txt
[2025-11-18 19:40:46] -rw------- 1 boinc boinc     93673 Nov 18 19:40 log.47493068._001669.job.log.1
[2025-11-18 19:40:46] -rw------- 1 boinc boinc       186 Nov 18 19:40 output.list
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc       620 Nov 18 19:40 runtime_log
[2025-11-18 19:40:46] -rw------- 1 boinc boinc    163840 Nov 18 19:40 result.tar.gz
[2025-11-18 19:40:46] -rw------- 1 boinc boinc       649 Nov 18 19:40 y7ZKDmXtcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiWFKDmRgYCKo.diag
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc      8624 Nov 18 19:40 runtime_log.err
[2025-11-18 19:40:46] -rw-r--r-- 1 boinc boinc      8017 Nov 18 19:40 stderr.txt
[2025-11-18 19:40:46] No HITS result produced
[2025-11-18 19:40:46]  *** Contents of shared directory: ***
[2025-11-18 19:40:46] total 401216
[2025-11-18 19:40:46] -rw-r--r-- 2 boinc boinc 410063972 Nov 18 19:36 ATLAS.root_0
[2025-11-18 19:40:46] -rw-r--r-- 2 boinc boinc    590098 Nov 18 19:36 input.tar.gz
[2025-11-18 19:40:46] -rw-r--r-- 2 boinc boinc     15120 Nov 18 19:36 start_atlas.sh
[2025-11-18 19:40:46] -rw------- 1 boinc boinc    163840 Nov 18 19:40 result.tar.gz
19:40:47 (4182959): run_atlas exited; CPU time 31.960401
19:40:47 (4182959): called boinc_finish(0)

</stderr_txt>
]]>

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