Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:26:32 (13261): wrapper (7.7.26015): starting
21:26:32 (13261): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:26:32] Arguments: --nthreads 8
[2025-11-20 21:26:32] Threads: 8
[2025-11-20 21:26:32] Checking for CVMFS
[2025-11-20 21:26:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:26:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:26:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:26:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:26:35] 2.11.2.0 25379 277158 135156 153088 1 85 22103410 25165825 4632 130560 3 139352567 99.887 78759404 3082 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 21:26:35] CVMFS is ok
[2025-11-20 21:26:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:26:35] Checking for apptainer binary...
[2025-11-20 21:26:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:26:35] Running /usr/bin/apptainer --version
[2025-11-20 21:26:35] apptainer version 1.3.2-1.el7
[2025-11-20 21:26:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:26:54] cg-vwn336.simple-grid.lan
[2025-11-20 21:26:54] apptainer works
[2025-11-20 21:26:54] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:26:54] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:26:54] Starting ATLAS job with PandaID=6891558330
[2025-11-20 21:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:43:57]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:43:57] 2025-11-21 21:43:11,882 | INFO     | monitor loop #6111: job 0:6891558330 is in state 'finished'
[2025-11-21 22:43:57] 2025-11-21 21:43:11,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:43:57] 2025-11-21 21:43:12,952 | INFO     | time since job start (90728s) is within the limit (172800.0s)
[2025-11-21 22:43:57] 2025-11-21 21:43:14,386 | INFO     | monitor loop #6112: job 0:6891558330 is in state 'finished'
[2025-11-21 22:43:57] 2025-11-21 21:43:14,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:43:57] 2025-11-21 21:43:14,959 | INFO     | time since job start (90730s) is within the limit (172800.0s)
[2025-11-21 22:43:57] 2025-11-21 21:43:16,894 | INFO     | monitor loop #6113: job 0:6891558330 is in state 'finished'
[2025-11-21 22:43:57] 2025-11-21 21:43:16,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:43:57] 2025-11-21 21:43:16,965 | INFO     | time since job start (90732s) is within the limit (172800.0s)
[2025-11-21 22:43:57] 2025-11-21 21:43:18,972 | INFO     | time since job start (90734s) is within the limit (172800.0s)
[2025-11-21 22:43:57] 2025-11-21 21:43:19,399 | INFO     | monitor loop #6114: job 0:6891558330 is in state 'finished'
[2025-11-21 22:43:57] 2025-11-21 21:43:19,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:43:57] 2025-11-21 21:43:20,978 | INFO     | time since job start (90736s) is within the limit (172800.0s)
[2025-11-21 22:43:57] 2025-11-21 21:43:21,904 | INFO     | monitor loop #6115: job 0:6891558330 is in state 'finished'
[2025-11-21 22:43:57] 2025-11-21 21:43:21,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:43:57] 2025-11-21 21:43:22,898 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 22:43:57] 2025-11-21 21:43:22,899 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 22:43:57] 2025-11-21 21:43:22,901 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6891558330/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:43:57] 2025-11-21 21:43:22,902 | INFO     | extracted standard info from prmon json
[2025-11-21 22:43:57] 2025-11-21 21:43:22,902 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:43:57] 2025-11-21 21:43:22,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:43:57] 2025-11-21 21:43:22,932 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:43:57] 2025-11-21 21:43:22,935 | INFO     | sum of square deviations: 999124333326.44
[2025-11-21 22:43:57] 2025-11-21 21:43:22,993 | INFO     | time since job start (90738s) is within the limit (172800.0s)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,009 | INFO     | sum of deviations: 3812652821479.6445
[2025-11-21 22:43:57] 2025-11-21 21:43:23,009 | INFO     | mean x: 1763716229.3182125
[2025-11-21 22:43:57] 2025-11-21 21:43:23,009 | INFO     | mean y: 2846248.894380501
[2025-11-21 22:43:57] 2025-11-21 21:43:23,009 | INFO     | intersect: -6727484935.8256235
[2025-11-21 22:43:57] 2025-11-21 21:43:23,011 | INFO     | chi2: 23.949636212869336
[2025-11-21 22:43:57] 2025-11-21 21:43:23,013 | INFO     | sum of square deviations: 989012402662.7222
[2025-11-21 22:43:57] 2025-11-21 21:43:23,075 | INFO     | sum of deviations: 4279548600562.7554
[2025-11-21 22:43:57] 2025-11-21 21:43:23,076 | INFO     | mean x: 1763716076.8226902
[2025-11-21 22:43:57] 2025-11-21 21:43:23,076 | INFO     | mean y: 2853290.1868206523
[2025-11-21 22:43:57] 2025-11-21 21:43:23,076 | INFO     | intersect: -7628910121.51086
[2025-11-21 22:43:57] 2025-11-21 21:43:23,078 | INFO     | chi2: 21.0764318299067
[2025-11-21 22:43:57] 2025-11-21 21:43:23,078 | INFO     | current chi2=21.0764318299067 (change=11.996860233804806 %)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,078 | INFO     | right removable region: 1471
[2025-11-21 22:43:57] 2025-11-21 21:43:23,081 | INFO     | sum of square deviations: 989011214992.7227
[2025-11-21 22:43:57] 2025-11-21 21:43:23,151 | INFO     | sum of deviations: 3176413690521.7847
[2025-11-21 22:43:57] 2025-11-21 21:43:23,157 | INFO     | mean x: 1763716381.8226902
[2025-11-21 22:43:57] 2025-11-21 21:43:23,157 | INFO     | mean y: 2855843.167798913
[2025-11-21 22:43:57] 2025-11-21 21:43:23,157 | INFO     | intersect: -5661683422.4060135
[2025-11-21 22:43:57] 2025-11-21 21:43:23,159 | INFO     | chi2: 18.927659871887762
[2025-11-21 22:43:57] 2025-11-21 21:43:23,159 | INFO     | current chi2=18.927659871887762 (change=20.968904480824705 %)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,159 | INFO     | left removable region: 10
[2025-11-21 22:43:57] 2025-11-21 21:43:23,166 | INFO     | sum of square deviations: 967004454142.3326
[2025-11-21 22:43:57] 2025-11-21 21:43:23,258 | INFO     | sum of deviations: 3209015544668.8677
[2025-11-21 22:43:57] 2025-11-21 21:43:23,258 | INFO     | mean x: 1763716351.3326488
[2025-11-21 22:43:57] 2025-11-21 21:43:23,258 | INFO     | mean y: 2872818.5290896646
[2025-11-21 22:43:57] 2025-11-21 21:43:23,258 | INFO     | intersect: -5850040437.008063
[2025-11-21 22:43:57] 2025-11-21 21:43:23,260 | INFO     | chi2: 11.776698633064447
[2025-11-21 22:43:57] 2025-11-21 21:43:23,261 | INFO     | current memory leak: 3.32 B/s (using 1461 data points, chi2=11.78)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,263 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,263 | INFO     | ..............................
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . Timing measurements:
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . get job = 0 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . initial setup = 10 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . payload setup = 172 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . stage-in = 0 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . payload execution = 90263 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . stage-out = 5 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | . log creation = 2 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,264 | INFO     | ..............................
[2025-11-21 22:43:57] 2025-11-21 21:43:23,395 | INFO     | 
[2025-11-21 22:43:57] 2025-11-21 21:43:23,395 | INFO     | job summary report
[2025-11-21 22:43:57] 2025-11-21 21:43:23,395 | INFO     | --------------------------------------------------
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | PanDA job id: 6891558330
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | task id: 47493068
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | errors: (none)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | pilot state: finished 
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | transexitcode: 0
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | exeerrorcode: 0
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | exeerrordiag: 
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | exitcode: 0
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | exitmsg: OK
[2025-11-21 22:43:57] 2025-11-21 21:43:23,396 | INFO     | cpuconsumptiontime: 334112 s
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | nevents: 1000
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | neventsw: 0
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | pid: 23633
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | pgrp: 23633
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | corecount: 8
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | event service: False
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | sizes: {0: 2297964, 1: 2298649, 2: 2298848, 13: 2298848, 24: 2298904, 34: 2298932, 45: 2299088, 56: 2299116, 67: 2299144, 77: 2299172, 88: 2299228, 99: 2299536, 10
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | --------------------------------------------------
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | 
[2025-11-21 22:43:57] 2025-11-21 21:43:23,397 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-21 22:43:57] 2025-11-21 21:43:23,438 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:43:57] 2025-11-21 21:43:23,441 | INFO     | job 6891558330 has completed (purged errors)
[2025-11-21 22:43:57] 2025-11-21 21:43:23,441 | INFO     | overall cleanup function is called
[2025-11-21 22:43:57] 2025-11-21 21:43:24,460 | INFO     | --- collectZombieJob: --- 10, [23633]
[2025-11-21 22:43:57] 2025-11-21 21:43:24,460 | INFO     | zombie collector waiting for pid 23633
[2025-11-21 22:43:57] 2025-11-21 21:43:24,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:43:57] 2025-11-21 21:43:24,460 | INFO     | collected zombie processes
[2025-11-21 22:43:57] 2025-11-21 21:43:24,460 | INFO     | will attempt to kill all subprocesses of pid=23633
[2025-11-21 22:43:57] 2025-11-21 21:43:24,572 | INFO     | process IDs to be killed: [23633] (in reverse order)
[2025-11-21 22:43:57] 2025-11-21 21:43:24,648 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:43:57] 2025-11-21 21:43:24,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:43:57] 2025-11-21 21:43:24,652 | INFO     | did not find any defunct processes belonging to 23633
[2025-11-21 22:43:57] 2025-11-21 21:43:24,656 | INFO     | did not find any defunct processes belonging to 23633
[2025-11-21 22:43:57] 2025-11-21 21:43:24,658 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:43:57] 2025-11-21 21:43:24,658 | INFO     | ready for new job
[2025-11-21 22:43:57] 2025-11-21 21:43:24,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:43:57] 2025-11-21 21:43:24,665 | INFO     | ***************************************
[2025-11-21 22:43:57] 2025-11-21 21:43:24,666 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:43:57] 2025-11-21 21:43:24,666 | INFO     | ***************************************
[2025-11-21 22:43:57] 2025-11-21 21:43:24,666 | INFO     | 
[2025-11-21 22:43:57] 2025-11-21 21:43:24,667 | INFO     | pilot is running in a VM
[2025-11-21 22:43:57] 2025-11-21 21:43:24,667 | INFO     | architecture information:
[2025-11-21 22:43:57] 2025-11-21 21:43:24,668 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:43:57] 2025-11-21 21:43:24,772 | INFO     | cat /etc/os-release:
[2025-11-21 22:43:57] NAME="CentOS Linux"
[2025-11-21 22:43:57] VERSION="7 (Core)"
[2025-11-21 22:43:57] ID="centos"
[2025-11-21 22:43:57] ID_LIKE="rhel fedora"
[2025-11-21 22:43:57] VERSION_ID="7"
[2025-11-21 22:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:43:57] ANSI_COLOR="0;31"
[2025-11-21 22:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:43:57] HOME_URL="https://www.centos.org/"
[2025-11-21 22:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:43:57] 
[2025-11-21 22:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:43:57] 
[2025-11-21 22:43:57] 2025-11-21 21:43:24,773 | INFO     | ***************************************
[2025-11-21 22:43:57] 2025-11-21 21:43:25,275 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-21 22:43:57] 2025-11-21 21:43:25,328 | INFO     | sufficient remaining disk space (495130247168 B)
[2025-11-21 22:43:57] 2025-11-21 21:43:25,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:43:57] 2025-11-21 21:43:25,328 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:43:57] 2025-11-21 21:43:25,328 | INFO     | update_server=False
[2025-11-21 22:43:57] 2025-11-21 21:43:25,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:43:57] 2025-11-21 21:43:25,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:43:57] 2025-11-21 21:43:25,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:43:57] 2025-11-21 21:43:25,469 | INFO     | aborting loop
[2025-11-21 22:43:57] 2025-11-21 21:43:25,546 | INFO     | all payload control threads have been joined
[2025-11-21 22:43:57] 2025-11-21 21:43:25,811 | INFO     | all data control threads have been joined
[2025-11-21 22:43:57] 2025-11-21 21:43:26,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:43:57] 2025-11-21 21:43:26,303 | INFO     | all job control threads have been joined
[2025-11-21 22:43:57] 2025-11-21 21:43:26,336 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:26,339 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:26,474 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:26,551 | INFO     | [payload] control thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:26,622 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:26,818 | INFO     | [data] control thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:26,838 | INFO     | [job] validate thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:26,902 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:27,043 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:27,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:43:57] 2025-11-21 21:43:27,309 | INFO     | [job] control thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:27,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:27,619 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:27,660 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:27,812 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:28,060 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:31,090 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:43:57] 2025-11-21 21:43:42,499 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:43:57] 2025-11-21 21:43:44,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175949338432)>', '<ExcThread(monitor, started 140175350937344)>']
[2025-11-21 22:43:57] 2025-11-21 21:43:49,439 | INFO     | all workflow threads have been joined
[2025-11-21 22:43:57] 2025-11-21 21:43:49,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:43:57] 2025-11-21 21:43:49,439 | INFO     | traces error code: 0
[2025-11-21 22:43:57] 2025-11-21 21:43:49,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:43:57] 2025-11-21 21:43:56,239 | INFO     | PID=17049 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 22:43:57] 2025-11-21 21:43:56,239 | INFO     | .. there are 9 such processes running
[2025-11-21 22:43:57] 2025-11-21 21:43:56,241 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:43:57] 2025-11-21 21:43:56,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:43:57] 2025-11-21 21:43:56,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:43:57] 2025-11-21 21:43:56,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:43:57] 2025-11-21 21:43:56,241 | INFO     | [monitor] control thread has ended
[2025-11-21 22:43:57] 2025-11-21 21:43:56,594 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:43:57] 2025-11-21 21:43:56,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:43:57] 2025-11-21 21:43:56,710 [wrapper] pilotpid: 17049
[2025-11-21 22:43:57] 2025-11-21 21:43:56,718 [wrapper] Pilot exit status: 0
[2025-11-21 22:43:57] 2025-11-21 21:43:56,750 [wrapper] pandaids: 6891558330
[2025-11-21 22:43:57] 2025-11-21 21:43:56,804 [wrapper] cleanup supervisor_pilot 30594 17050
[2025-11-21 22:43:57] 2025-11-21 21:43:56,809 [wrapper] Test setup, not cleaning
[2025-11-21 22:43:57] 2025-11-21 21:43:56,813 [wrapper] apfmon messages muted
[2025-11-21 22:43:57] 2025-11-21 21:43:56,817 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:43:57] 2025-11-21 21:43:56,823 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:43:57]  *** Error codes and diagnostics ***
[2025-11-21 22:43:57]     "exeErrorCode": 0,
[2025-11-21 22:43:57]     "exeErrorDiag": "",
[2025-11-21 22:43:57]     "pilotErrorCode": 0,
[2025-11-21 22:43:57]     "pilotErrorDiag": "",
[2025-11-21 22:43:57]  *** Listing of results directory ***
[2025-11-21 22:43:57] total 1316236
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 22:43:57] -rwx------. 1 boinc boinc     36292 Nov 18 16:23 runpilot2-wrapper.sh
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:23 queuedata.json
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc       100 Nov 20 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:43:57] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 21:26 run_atlas
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc       105 Nov 20 21:26 job.xml
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc      6390 Nov 20 21:26 init_data.xml
[2025-11-21 22:43:57] -rw-r--r--. 2 boinc boinc 408824106 Nov 20 21:26 EVNT.47493065._000054.pool.root.1
[2025-11-21 22:43:57] drwxrwx--x. 2 boinc boinc        68 Nov 20 21:26 shared
[2025-11-21 22:43:57] -rw-r--r--. 2 boinc boinc    590088 Nov 20 21:26 input.tar.gz
[2025-11-21 22:43:57] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:26 start_atlas.sh
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc         0 Nov 20 21:26 boinc_lockfile
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc      2771 Nov 20 21:26 pandaJob.out
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc    989440 Nov 20 21:30 agis_schedconf.cvmfs.json
[2025-11-21 22:43:57] drwx------. 5 boinc boinc      4096 Nov 20 21:31 pilot3
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc       533 Nov 21 22:22 boinc_task_state.xml
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc 905747930 Nov 21 22:40 HITS.47493068._000532.pool.root.1
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc      1034 Nov 21 22:41 memory_monitor_summary.json
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc   1526164 Nov 21 22:41 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc   2559977 Nov 21 22:41 log.47493068._000532.job.log.tgz.1
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc      7946 Nov 21 22:43 heartbeat.json
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc      8192 Nov 21 22:43 boinc_mmap_file
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc        29 Nov 21 22:43 wrapper_checkpoint.txt
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc        95 Nov 21 22:43 pilot_heartbeat.json
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc       820 Nov 21 22:43 pilotlog.txt
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc  12119552 Nov 21 22:43 log.47493068._000532.job.log.1
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc       353 Nov 21 22:43 output.list
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc       620 Nov 21 22:43 runtime_log
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc  14694400 Nov 21 22:43 result.tar.gz
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc      8703 Nov 21 22:43 runtime_log.err
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc       662 Nov 21 22:43 DfrMDmTjcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPJFKDmwohKfn.diag
[2025-11-21 22:43:57] -rw-r--r--. 1 boinc boinc     21443 Nov 21 22:43 stderr.txt
[2025-11-21 22:43:57] HITS file was successfully produced:
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc 905747930 Nov 21 22:40 shared/HITS.pool.root.1
[2025-11-21 22:43:57]  *** Contents of shared directory: ***
[2025-11-21 22:43:57] total 1298712
[2025-11-21 22:43:57] -rw-r--r--. 2 boinc boinc 408824106 Nov 20 21:26 ATLAS.root_0
[2025-11-21 22:43:57] -rw-r--r--. 2 boinc boinc    590088 Nov 20 21:26 input.tar.gz
[2025-11-21 22:43:57] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:26 start_atlas.sh
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc 905747930 Nov 21 22:40 HITS.pool.root.1
[2025-11-21 22:43:57] -rw-------. 1 boinc boinc  14694400 Nov 21 22:43 result.tar.gz
22:43:58 (13261): run_atlas exited; CPU time 334620.667735
22:43:58 (13261): called boinc_finish(0)

</stderr_txt>
]]>

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