Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:12 (6706): wrapper (7.7.26015): starting
21:40:12 (6706): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 21:40:12] Arguments: --nthreads 8
[2025-11-19 21:40:12] Threads: 8
[2025-11-19 21:40:12] Checking for CVMFS
[2025-11-19 21:40:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 21:40:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 21:40:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 21:40:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 21:40:13] 2.11.2.0 28641 275635 156056 153056 3 200 18898929 25165825 3804 130560 218 121864489 99.876 70761215 2764 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 21:40:13] CVMFS is ok
[2025-11-19 21:40:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 21:40:13] Checking for apptainer binary...
[2025-11-19 21:40:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 21:40:13] Running /usr/bin/apptainer --version
[2025-11-19 21:40:13] apptainer version 1.3.2-1.el7
[2025-11-19 21:40:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 21:40:14] cg-vwn402.simple-grid.lan
[2025-11-19 21:40:14] apptainer works
[2025-11-19 21:40:14] Set ATHENA_PROC_NUMBER=8
[2025-11-19 21:40:14] Set ATHENA_CORE_NUMBER=8
[2025-11-19 21:40:14] Starting ATLAS job with PandaID=6891567057
[2025-11-19 21:40:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 22:58:22]  *** The last 200 lines of the pilot log: ***
[2025-11-20 22:58:22] 2025-11-20 21:57:28,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 22:58:22] 2025-11-20 21:57:28,641 | INFO     | fitting pss+swap vs Time
[2025-11-20 22:58:22] 2025-11-20 21:57:28,644 | INFO     | sum of square deviations: 1027806926234.9895
[2025-11-20 22:58:22] 2025-11-20 21:57:28,712 | INFO     | sum of deviations: 3908618803851.444
[2025-11-20 22:58:22] 2025-11-20 21:57:28,713 | INFO     | mean x: 1763630360.2716298
[2025-11-20 22:58:22] 2025-11-20 21:57:28,713 | INFO     | mean y: 2873961.660630449
[2025-11-20 22:58:22] 2025-11-20 21:57:28,713 | INFO     | intersect: -6703987622.2094
[2025-11-20 22:58:22] 2025-11-20 21:57:28,715 | INFO     | chi2: 8.029830024170458
[2025-11-20 22:58:22] 2025-11-20 21:57:28,717 | INFO     | sum of square deviations: 1017502036864.3779
[2025-11-20 22:58:22] 2025-11-20 21:57:28,776 | INFO     | sum of deviations: 4428266559053.195
[2025-11-20 22:58:22] 2025-11-20 21:57:28,776 | INFO     | mean x: 1763630207.7759085
[2025-11-20 22:58:22] 2025-11-20 21:57:28,776 | INFO     | mean y: 2881651.793405114
[2025-11-20 22:58:22] 2025-11-20 21:57:28,776 | INFO     | intersect: -7672606345.948126
[2025-11-20 22:58:22] 2025-11-20 21:57:28,778 | INFO     | chi2: 4.660328957516118
[2025-11-20 22:58:22] 2025-11-20 21:57:28,778 | INFO     | current chi2=4.660328957516118 (change=41.96229629409167 %)
[2025-11-20 22:58:22] 2025-11-20 21:57:28,780 | INFO     | sum of square deviations: 1007266174668.2701
[2025-11-20 22:58:22] 2025-11-20 21:57:28,840 | INFO     | sum of deviations: 4683261499883.484
[2025-11-20 22:58:22] 2025-11-20 21:57:28,841 | INFO     | mean x: 1763630055.2795408
[2025-11-20 22:58:22] 2025-11-20 21:57:28,841 | INFO     | mean y: 2885446.834571236
[2025-11-20 22:58:22] 2025-11-20 21:57:28,841 | INFO     | intersect: -8197072961.029394
[2025-11-20 22:58:22] 2025-11-20 21:57:28,843 | INFO     | chi2: 3.4933390038523
[2025-11-20 22:58:22] 2025-11-20 21:57:28,843 | INFO     | current chi2=3.4933390038523 (change=25.040935185094852 %)
[2025-11-20 22:58:22] 2025-11-20 21:57:28,845 | INFO     | sum of square deviations: 997098745785.4396
[2025-11-20 22:58:22] 2025-11-20 21:57:28,903 | INFO     | sum of deviations: 4684345853840.26
[2025-11-20 22:58:22] 2025-11-20 21:57:28,903 | INFO     | mean x: 1763629902.7798102
[2025-11-20 22:58:22] 2025-11-20 21:57:28,903 | INFO     | mean y: 2885462.2838753387
[2025-11-20 22:58:22] 2025-11-20 21:57:28,903 | INFO     | intersect: -8282605275.433934
[2025-11-20 22:58:22] 2025-11-20 21:57:28,905 | INFO     | chi2: 3.4612398283346826
[2025-11-20 22:58:22] 2025-11-20 21:57:28,905 | INFO     | current chi2=3.4612398283346826 (change=0.9188680366325706 %)
[2025-11-20 22:58:22] 2025-11-20 21:57:28,905 | INFO     | right removable region: 1475
[2025-11-20 22:58:22] 2025-11-20 21:57:28,907 | INFO     | sum of square deviations: 1017500880304.378
[2025-11-20 22:58:22] 2025-11-20 21:57:28,966 | INFO     | sum of deviations: 3409639276125.824
[2025-11-20 22:58:22] 2025-11-20 21:57:28,967 | INFO     | mean x: 1763630512.7759085
[2025-11-20 22:58:22] 2025-11-20 21:57:28,967 | INFO     | mean y: 2881342.6541049797
[2025-11-20 22:58:22] 2025-11-20 21:57:28,967 | INFO     | intersect: -5907033804.678068
[2025-11-20 22:58:22] 2025-11-20 21:57:28,969 | INFO     | chi2: 5.1127215774171315
[2025-11-20 22:58:22] 2025-11-20 21:57:28,969 | INFO     | current chi2=5.1127215774171315 (change=36.32839596819095 %)
[2025-11-20 22:58:22] 2025-11-20 21:57:28,971 | INFO     | sum of square deviations: 1007264314294.9419
[2025-11-20 22:58:22] 2025-11-20 21:57:29,042 | INFO     | sum of deviations: 3262734596034.3667
[2025-11-20 22:58:22] 2025-11-20 21:57:29,043 | INFO     | mean x: 1763630665.2775152
[2025-11-20 22:58:22] 2025-11-20 21:57:29,043 | INFO     | mean y: 2883529.5124915596
[2025-11-20 22:58:22] 2025-11-20 21:57:29,043 | INFO     | intersect: -5709875976.174834
[2025-11-20 22:58:22] 2025-11-20 21:57:29,045 | INFO     | chi2: 4.874879595304779
[2025-11-20 22:58:22] 2025-11-20 21:57:29,045 | INFO     | current chi2=4.874879595304779 (change=4.651964291638718 %)
[2025-11-20 22:58:22] 2025-11-20 21:57:29,045 | INFO     | left removable region: 20
[2025-11-20 22:58:22] 2025-11-20 21:57:29,047 | INFO     | sum of square deviations: 955141345499.4889
[2025-11-20 22:58:22] 2025-11-20 21:57:29,103 | INFO     | sum of deviations: 3878664496571.8877
[2025-11-20 22:58:22] 2025-11-20 21:57:29,104 | INFO     | mean x: 1763630482.286598
[2025-11-20 22:58:22] 2025-11-20 21:57:29,104 | INFO     | mean y: 2897506.086597938
[2025-11-20 22:58:22] 2025-11-20 21:57:29,104 | INFO     | intersect: -7158902125.924665
[2025-11-20 22:58:22] 2025-11-20 21:57:29,106 | INFO     | chi2: 0.24223111199516567
[2025-11-20 22:58:22] 2025-11-20 21:57:29,106 | INFO     | current memory leak: 4.06 B/s (using 1455 data points, chi2=0.24)
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | ..............................
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | . Timing measurements:
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | . get job = 0 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | . initial setup = 2 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | . payload setup = 14 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | . stage-in = 0 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,108 | INFO     | . payload execution = 90945 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,109 | INFO     | . stage-out = 3 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,109 | INFO     | . log creation = 1 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,109 | INFO     | ..............................
[2025-11-20 22:58:22] 2025-11-20 21:57:29,234 | INFO     | 
[2025-11-20 22:58:22] 2025-11-20 21:57:29,234 | INFO     | job summary report
[2025-11-20 22:58:22] 2025-11-20 21:57:29,234 | INFO     | --------------------------------------------------
[2025-11-20 22:58:22] 2025-11-20 21:57:29,234 | INFO     | PanDA job id: 6891567057
[2025-11-20 22:58:22] 2025-11-20 21:57:29,234 | INFO     | task id: 47493068
[2025-11-20 22:58:22] 2025-11-20 21:57:29,234 | INFO     | errors: (none)
[2025-11-20 22:58:22] 2025-11-20 21:57:29,234 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | pilot state: finished 
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | transexitcode: 0
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | exeerrorcode: 0
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | exeerrordiag: 
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | exitcode: 0
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | exitmsg: OK
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | cpuconsumptiontime: 339617 s
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | nevents: 1000
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | neventsw: 0
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | pid: 18045
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | pgrp: 18045
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | corecount: 8
[2025-11-20 22:58:22] 2025-11-20 21:57:29,235 | INFO     | event service: False
[2025-11-20 22:58:22] 2025-11-20 21:57:29,236 | INFO     | sizes: {0: 2297029, 1: 2297228, 12: 2297228, 13: 2297518, 23: 2297574, 90964: 2361663, 90968: 2372309, 90980: 2372499}
[2025-11-20 22:58:22] 2025-11-20 21:57:29,236 | INFO     | --------------------------------------------------
[2025-11-20 22:58:22] 2025-11-20 21:57:29,236 | INFO     | 
[2025-11-20 22:58:22] 2025-11-20 21:57:29,236 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-20 22:58:22] 2025-11-20 21:57:29,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 22:58:22] 2025-11-20 21:57:29,269 | INFO     | job 6891567057 has completed (purged errors)
[2025-11-20 22:58:22] 2025-11-20 21:57:29,270 | INFO     | overall cleanup function is called
[2025-11-20 22:58:22] 2025-11-20 21:57:30,286 | INFO     | --- collectZombieJob: --- 10, [18045]
[2025-11-20 22:58:22] 2025-11-20 21:57:30,286 | INFO     | zombie collector waiting for pid 18045
[2025-11-20 22:58:22] 2025-11-20 21:57:30,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 22:58:22] 2025-11-20 21:57:30,287 | INFO     | collected zombie processes
[2025-11-20 22:58:22] 2025-11-20 21:57:30,287 | INFO     | will attempt to kill all subprocesses of pid=18045
[2025-11-20 22:58:22] 2025-11-20 21:57:30,380 | INFO     | process IDs to be killed: [18045] (in reverse order)
[2025-11-20 22:58:22] 2025-11-20 21:57:30,442 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 22:58:22] 2025-11-20 21:57:30,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 22:58:22] 2025-11-20 21:57:30,446 | INFO     | did not find any defunct processes belonging to 18045
[2025-11-20 22:58:22] 2025-11-20 21:57:30,450 | INFO     | did not find any defunct processes belonging to 18045
[2025-11-20 22:58:22] 2025-11-20 21:57:30,459 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 22:58:22] 2025-11-20 21:57:30,460 | INFO     | ready for new job
[2025-11-20 22:58:22] 2025-11-20 21:57:30,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 22:58:22] 2025-11-20 21:57:30,466 | INFO     | ***************************************
[2025-11-20 22:58:22] 2025-11-20 21:57:30,466 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 22:58:22] 2025-11-20 21:57:30,467 | INFO     | ***************************************
[2025-11-20 22:58:22] 2025-11-20 21:57:30,467 | INFO     | 
[2025-11-20 22:58:22] 2025-11-20 21:57:30,467 | INFO     | pilot is running in a VM
[2025-11-20 22:58:22] 2025-11-20 21:57:30,467 | INFO     | architecture information:
[2025-11-20 22:58:22] 2025-11-20 21:57:30,468 | INFO     | executing command: cat /etc/os-release
[2025-11-20 22:58:22] 2025-11-20 21:57:30,572 | INFO     | cat /etc/os-release:
[2025-11-20 22:58:22] NAME="CentOS Linux"
[2025-11-20 22:58:22] VERSION="7 (Core)"
[2025-11-20 22:58:22] ID="centos"
[2025-11-20 22:58:22] ID_LIKE="rhel fedora"
[2025-11-20 22:58:22] VERSION_ID="7"
[2025-11-20 22:58:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 22:58:22] ANSI_COLOR="0;31"
[2025-11-20 22:58:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 22:58:22] HOME_URL="https://www.centos.org/"
[2025-11-20 22:58:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 22:58:22] 
[2025-11-20 22:58:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 22:58:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 22:58:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 22:58:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 22:58:22] 
[2025-11-20 22:58:22] 2025-11-20 21:57:30,572 | INFO     | ***************************************
[2025-11-20 22:58:22] 2025-11-20 21:57:31,075 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-20 22:58:22] 2025-11-20 21:57:31,163 | INFO     | sufficient remaining disk space (493920190464 B)
[2025-11-20 22:58:22] 2025-11-20 21:57:31,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 22:58:22] 2025-11-20 21:57:31,164 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 22:58:22] 2025-11-20 21:57:31,164 | INFO     | update_server=False
[2025-11-20 22:58:22] 2025-11-20 21:57:31,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 22:58:22] 2025-11-20 21:57:31,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:58:22] 2025-11-20 21:57:31,165 | INFO     | aborting loop
[2025-11-20 22:58:22] 2025-11-20 21:57:31,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:58:22] 2025-11-20 21:57:31,351 | INFO     | all data control threads have been joined
[2025-11-20 22:58:22] 2025-11-20 21:57:31,483 | INFO     | all payload control threads have been joined
[2025-11-20 22:58:22] 2025-11-20 21:57:31,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 22:58:22] 2025-11-20 21:57:31,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 22:58:22] 2025-11-20 21:57:32,170 | INFO     | [job] retrieve thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,171 | INFO     | [job] job monitor thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,173 | INFO     | [job] queue monitor thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,349 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,356 | INFO     | [data] control thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,426 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,488 | INFO     | [payload] control thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,839 | INFO     | all job control threads have been joined
[2025-11-20 22:58:22] 2025-11-20 21:57:32,852 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,886 | INFO     | [payload] validate_post thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:32,905 | INFO     | [payload] failed_post thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:33,122 | INFO     | [data] copytool_in thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:33,209 | INFO     | [job] validate thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:33,844 | INFO     | [job] control thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:33,954 | INFO     | [data] copytool_out thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:57:35,573 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 22:58:22] 2025-11-20 21:58:01,225 | INFO     | PID=10440 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 22:58:22] 2025-11-20 21:58:01,225 | INFO     | .. there are 9 such processes running
[2025-11-20 22:58:22] 2025-11-20 21:58:01,226 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 22:58:22] 2025-11-20 21:58:01,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 22:58:22] 2025-11-20 21:58:01,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 22:58:22] 2025-11-20 21:58:15,109 | INFO     | [monitor] cgroup control has ended
[2025-11-20 22:58:22] 2025-11-20 21:58:16,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330804709184)>', '<ExcThread(monitor, started 140330489845504)>']
[2025-11-20 22:58:22] 2025-11-20 21:58:17,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 22:58:22] 2025-11-20 21:58:17,309 | INFO     | [monitor] control thread has ended
[2025-11-20 22:58:22] 2025-11-20 21:58:22,019 | INFO     | all workflow threads have been joined
[2025-11-20 22:58:22] 2025-11-20 21:58:22,019 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 22:58:22] 2025-11-20 21:58:22,020 | INFO     | traces error code: 0
[2025-11-20 22:58:22] 2025-11-20 21:58:22,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 22:58:22] 2025-11-20 21:58:22,292 [wrapper] ==== pilot stdout END ====
[2025-11-20 22:58:22] 2025-11-20 21:58:22,360 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 22:58:22] 2025-11-20 21:58:22,434 [wrapper] pilotpid: 10440
[2025-11-20 22:58:22] 2025-11-20 21:58:22,460 [wrapper] Pilot exit status: 0
[2025-11-20 22:58:22] 2025-11-20 21:58:22,490 [wrapper] pandaids: 6891567057
[2025-11-20 22:58:22] 2025-11-20 21:58:22,537 [wrapper] cleanup supervisor_pilot 28872 10441
[2025-11-20 22:58:22] 2025-11-20 21:58:22,556 [wrapper] Test setup, not cleaning
[2025-11-20 22:58:22] 2025-11-20 21:58:22,561 [wrapper] apfmon messages muted
[2025-11-20 22:58:22] 2025-11-20 21:58:22,566 [wrapper] ==== wrapper stdout END ====
[2025-11-20 22:58:22] 2025-11-20 21:58:22,580 [wrapper] ==== wrapper stderr END ====
[2025-11-20 22:58:22]  *** Error codes and diagnostics ***
[2025-11-20 22:58:22]     "exeErrorCode": 0,
[2025-11-20 22:58:22]     "exeErrorDiag": "",
[2025-11-20 22:58:22]     "pilotErrorCode": 0,
[2025-11-20 22:58:22]     "pilotErrorDiag": "",
[2025-11-20 22:58:22]  *** Listing of results directory ***
[2025-11-20 22:58:22] total 1341984
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:32 queuedata.json
[2025-11-20 22:58:22] -rwx------. 1 boinc boinc     36292 Nov 18 16:33 runpilot2-wrapper.sh
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc       100 Nov 19 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 22:58:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 21:40 run_atlas
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc       105 Nov 19 21:40 job.xml
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc      6388 Nov 19 21:40 init_data.xml
[2025-11-20 22:58:22] -rw-r--r--. 2 boinc boinc 412092523 Nov 19 21:40 EVNT.47493065._000159.pool.root.1
[2025-11-20 22:58:22] drwxrwx--x. 2 boinc boinc        68 Nov 19 21:40 shared
[2025-11-20 22:58:22] -rw-r--r--. 2 boinc boinc    590094 Nov 19 21:40 input.tar.gz
[2025-11-20 22:58:22] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:40 start_atlas.sh
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc         0 Nov 19 21:40 boinc_lockfile
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc      2773 Nov 19 21:40 pandaJob.out
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc    989443 Nov 19 21:40 agis_schedconf.cvmfs.json
[2025-11-20 22:58:22] drwx------. 5 boinc boinc      4096 Nov 19 21:40 pilot3
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc       533 Nov 20 22:44 boinc_task_state.xml
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc 928896891 Nov 20 22:56 HITS.47493068._001587.pool.root.1
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc      1034 Nov 20 22:57 memory_monitor_summary.json
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc   1526164 Nov 20 22:57 agis_ddmendpoints.agis.ALL.json
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc   2546108 Nov 20 22:57 log.47493068._001587.job.log.tgz.1
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc      8627 Nov 20 22:57 heartbeat.json
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc        95 Nov 20 22:58 pilot_heartbeat.json
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc        29 Nov 20 22:58 wrapper_checkpoint.txt
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc      8192 Nov 20 22:58 boinc_mmap_file
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc      4884 Nov 20 22:58 pilotlog.txt
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc  12099802 Nov 20 22:58 log.47493068._001587.job.log.1
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc       353 Nov 20 22:58 output.list
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc       620 Nov 20 22:58 runtime_log
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc  14663680 Nov 20 22:58 result.tar.gz
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc       662 Nov 20 22:58 SlwMDmWtcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXVFKDm0WlbDm.diag
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc      8703 Nov 20 22:58 runtime_log.err
[2025-11-20 22:58:22] -rw-r--r--. 1 boinc boinc     20775 Nov 20 22:58 stderr.txt
[2025-11-20 22:58:22] HITS file was successfully produced:
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc 928896891 Nov 20 22:56 shared/HITS.pool.root.1
[2025-11-20 22:58:22]  *** Contents of shared directory: ***
[2025-11-20 22:58:22] total 1324480
[2025-11-20 22:58:22] -rw-r--r--. 2 boinc boinc 412092523 Nov 19 21:40 ATLAS.root_0
[2025-11-20 22:58:22] -rw-r--r--. 2 boinc boinc    590094 Nov 19 21:40 input.tar.gz
[2025-11-20 22:58:22] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:40 start_atlas.sh
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc 928896891 Nov 20 22:56 HITS.pool.root.1
[2025-11-20 22:58:22] -rw-------. 1 boinc boinc  14663680 Nov 20 22:58 result.tar.gz
22:58:24 (6706): run_atlas exited; CPU time 340154.017456
22:58:24 (6706): called boinc_finish(0)

</stderr_txt>
]]>

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