Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:21:31 (7532): wrapper (7.7.26015): starting
21:21:31 (7532): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 21:21:31] Arguments: --nthreads 8
[2025-11-19 21:21:31] Threads: 8
[2025-11-19 21:21:31] Checking for CVMFS
[2025-11-19 21:21:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 21:21:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 21:21:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 21:21:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 21:21:33] 2.11.2.0 4277 275589 136976 153056 0 235 22847858 25165824 4535 130560 2 139887758 99.884 74158931 2996 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 21:21:33] CVMFS is ok
[2025-11-19 21:21:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 21:21:33] Checking for apptainer binary...
[2025-11-19 21:21:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 21:21:33] Running /usr/bin/apptainer --version
[2025-11-19 21:21:33] apptainer version 1.3.2-1.el7
[2025-11-19 21:21:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 21:21:41] cg-vwn279.simple-grid.lan
[2025-11-19 21:21:41] apptainer works
[2025-11-19 21:21:41] Set ATHENA_PROC_NUMBER=8
[2025-11-19 21:21:41] Set ATHENA_CORE_NUMBER=8
[2025-11-19 21:21:41] Starting ATLAS job with PandaID=6891579390
[2025-11-19 21:21:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:24:07]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:24:07] 2025-11-20 22:22:57,516 | INFO     | time since job start (93465s) is within the limit (172800.0s)
[2025-11-20 23:24:07] 2025-11-20 22:22:58,704 | INFO     | PID=11301 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 23:24:07] 2025-11-20 22:22:58,705 | INFO     | .. there are 9 such processes running
[2025-11-20 23:24:07] 2025-11-20 22:22:59,119 | INFO     | monitor loop #6264: job 0:6891579390 is in state 'finished'
[2025-11-20 23:24:07] 2025-11-20 22:22:59,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:24:07] 2025-11-20 22:22:59,709 | INFO     | time since job start (93467s) is within the limit (172800.0s)
[2025-11-20 23:24:07] 2025-11-20 22:23:01,628 | INFO     | monitor loop #6265: job 0:6891579390 is in state 'finished'
[2025-11-20 23:24:07] 2025-11-20 22:23:01,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:24:07] 2025-11-20 22:23:01,716 | INFO     | time since job start (93469s) is within the limit (172800.0s)
[2025-11-20 23:24:07] 2025-11-20 22:23:01,716 | INFO     | 93477s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-20 23:24:07] 2025-11-20 22:23:03,730 | INFO     | time since job start (93471s) is within the limit (172800.0s)
[2025-11-20 23:24:07] 2025-11-20 22:23:04,133 | INFO     | monitor loop #6266: job 0:6891579390 is in state 'finished'
[2025-11-20 23:24:07] 2025-11-20 22:23:04,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:24:07] 2025-11-20 22:23:04,876 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 23:24:07] 2025-11-20 22:23:04,877 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 23:24:07] 2025-11-20 22:23:04,879 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6891579390/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:24:07] 2025-11-20 22:23:04,879 | INFO     | extracted standard info from prmon json
[2025-11-20 23:24:07] 2025-11-20 22:23:04,879 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:24:07] 2025-11-20 22:23:04,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:24:07] 2025-11-20 22:23:04,912 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:24:07] 2025-11-20 22:23:04,915 | INFO     | sum of square deviations: 1095414620281.3483
[2025-11-20 23:24:07] 2025-11-20 22:23:04,979 | INFO     | sum of deviations: 3073494038636.253
[2025-11-20 23:24:07] 2025-11-20 22:23:04,979 | INFO     | mean x: 1763630843.1135917
[2025-11-20 23:24:07] 2025-11-20 22:23:04,979 | INFO     | mean y: 2826212.403151674
[2025-11-20 23:24:07] 2025-11-20 22:23:04,979 | INFO     | intersect: -4945536519.210235
[2025-11-20 23:24:07] 2025-11-20 22:23:04,981 | INFO     | chi2: 34.532962466672274
[2025-11-20 23:24:07] 2025-11-20 22:23:04,983 | INFO     | sum of square deviations: 1084661810352.6285
[2025-11-20 23:24:07] 2025-11-20 22:23:05,044 | INFO     | sum of deviations: 3569686220330.1772
[2025-11-20 23:24:07] 2025-11-20 22:23:05,045 | INFO     | mean x: 1763630690.6172595
[2025-11-20 23:24:07] 2025-11-20 22:23:05,045 | INFO     | mean y: 2833248.1001317524
[2025-11-20 23:24:07] 2025-11-20 22:23:05,045 | INFO     | intersect: -5801379746.179711
[2025-11-20 23:24:07] 2025-11-20 22:23:05,047 | INFO     | chi2: 31.2915593333793
[2025-11-20 23:24:07] 2025-11-20 22:23:05,047 | INFO     | current chi2=31.2915593333793 (change=9.386403313707152 %)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,047 | INFO     | right removable region: 1517
[2025-11-20 23:24:07] 2025-11-20 22:23:05,049 | INFO     | sum of square deviations: 1084660775792.6279
[2025-11-20 23:24:07] 2025-11-20 22:23:05,123 | INFO     | sum of deviations: 2420072233615.8765
[2025-11-20 23:24:07] 2025-11-20 22:23:05,124 | INFO     | mean x: 1763630995.6172595
[2025-11-20 23:24:07] 2025-11-20 22:23:05,124 | INFO     | mean y: 2835478.7450592886
[2025-11-20 23:24:07] 2025-11-20 22:23:05,124 | INFO     | intersect: -3932140781.2000656
[2025-11-20 23:24:07] 2025-11-20 22:23:05,126 | INFO     | chi2: 29.54836930648981
[2025-11-20 23:24:07] 2025-11-20 22:23:05,126 | INFO     | current chi2=29.54836930648981 (change=14.43430509326586 %)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,126 | INFO     | left removable region: 10
[2025-11-20 23:24:07] 2025-11-20 22:23:05,128 | INFO     | sum of square deviations: 1061251764973.2966
[2025-11-20 23:24:07] 2025-11-20 22:23:05,202 | INFO     | sum of deviations: 2436027495719.1562
[2025-11-20 23:24:07] 2025-11-20 22:23:05,202 | INFO     | mean x: 1763630965.1254148
[2025-11-20 23:24:07] 2025-11-20 22:23:05,202 | INFO     | mean y: 2852429.7558062375
[2025-11-20 23:24:07] 2025-11-20 22:23:05,202 | INFO     | intersect: -4045436265.8633013
[2025-11-20 23:24:07] 2025-11-20 22:23:05,204 | INFO     | chi2: 21.707816529968998
[2025-11-20 23:24:07] 2025-11-20 22:23:05,204 | INFO     | current memory leak: 2.30 B/s (using 1507 data points, chi2=21.71)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,207 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,207 | INFO     | ..............................
[2025-11-20 23:24:07] 2025-11-20 22:23:05,207 | INFO     | . Timing measurements:
[2025-11-20 23:24:07] 2025-11-20 22:23:05,207 | INFO     | . get job = 0 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,207 | INFO     | . initial setup = 7 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,207 | INFO     | . payload setup = 134 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,208 | INFO     | . stage-in = 0 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,208 | INFO     | . payload execution = 93013 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,208 | INFO     | . stage-out = 6 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,208 | INFO     | . log creation = 2 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,208 | INFO     | ..............................
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | 
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | job summary report
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | --------------------------------------------------
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | PanDA job id: 6891579390
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | task id: 47493068
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | errors: (none)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:24:07] 2025-11-20 22:23:05,647 | INFO     | pilot state: finished 
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | transexitcode: 0
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | exeerrorcode: 0
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | exeerrordiag: 
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | exitcode: 0
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | exitmsg: OK
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | cpuconsumptiontime: 341260 s
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | nevents: 1000
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | neventsw: 0
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | pid: 17887
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | pgrp: 17887
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | corecount: 8
[2025-11-20 23:24:07] 2025-11-20 22:23:05,648 | INFO     | event service: False
[2025-11-20 23:24:07] 2025-11-20 22:23:05,649 | INFO     | sizes: {0: 2296974, 1: 2297058, 2: 2297257, 13: 2297257, 24: 2297313, 35: 2297341, 46: 2297497, 56: 2297525, 67: 2297553, 78: 2297581, 89: 2297637, 99: 2297945, 11
[2025-11-20 23:24:07] 2025-11-20 22:23:05,649 | INFO     | --------------------------------------------------
[2025-11-20 23:24:07] 2025-11-20 22:23:05,649 | INFO     | 
[2025-11-20 23:24:07] 2025-11-20 22:23:05,649 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-11-20 23:24:07] 2025-11-20 22:23:05,737 | INFO     | time since job start (93473s) is within the limit (172800.0s)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:24:07] 2025-11-20 22:23:05,938 | INFO     | job 6891579390 has completed (purged errors)
[2025-11-20 23:24:07] 2025-11-20 22:23:05,938 | INFO     | overall cleanup function is called
[2025-11-20 23:24:07] 2025-11-20 22:23:06,964 | INFO     | --- collectZombieJob: --- 10, [17887]
[2025-11-20 23:24:07] 2025-11-20 22:23:06,964 | INFO     | zombie collector waiting for pid 17887
[2025-11-20 23:24:07] 2025-11-20 22:23:06,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:24:07] 2025-11-20 22:23:06,964 | INFO     | collected zombie processes
[2025-11-20 23:24:07] 2025-11-20 22:23:06,964 | INFO     | will attempt to kill all subprocesses of pid=17887
[2025-11-20 23:24:07] 2025-11-20 22:23:07,106 | INFO     | process IDs to be killed: [17887] (in reverse order)
[2025-11-20 23:24:07] 2025-11-20 22:23:07,964 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:24:07] 2025-11-20 22:23:07,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:24:07] 2025-11-20 22:23:07,969 | INFO     | did not find any defunct processes belonging to 17887
[2025-11-20 23:24:07] 2025-11-20 22:23:07,972 | INFO     | did not find any defunct processes belonging to 17887
[2025-11-20 23:24:07] 2025-11-20 22:23:08,036 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:24:07] 2025-11-20 22:23:08,036 | INFO     | ready for new job
[2025-11-20 23:24:07] 2025-11-20 22:23:08,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:24:07] 2025-11-20 22:23:08,043 | INFO     | ***************************************
[2025-11-20 23:24:07] 2025-11-20 22:23:08,044 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:24:07] 2025-11-20 22:23:08,044 | INFO     | ***************************************
[2025-11-20 23:24:07] 2025-11-20 22:23:08,044 | INFO     | 
[2025-11-20 23:24:07] 2025-11-20 22:23:08,045 | INFO     | pilot is running in a VM
[2025-11-20 23:24:07] 2025-11-20 22:23:08,045 | INFO     | architecture information:
[2025-11-20 23:24:07] 2025-11-20 22:23:08,057 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:24:07] 2025-11-20 22:23:08,300 | INFO     | cat /etc/os-release:
[2025-11-20 23:24:07] NAME="CentOS Linux"
[2025-11-20 23:24:07] VERSION="7 (Core)"
[2025-11-20 23:24:07] ID="centos"
[2025-11-20 23:24:07] ID_LIKE="rhel fedora"
[2025-11-20 23:24:07] VERSION_ID="7"
[2025-11-20 23:24:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:24:07] ANSI_COLOR="0;31"
[2025-11-20 23:24:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:24:07] HOME_URL="https://www.centos.org/"
[2025-11-20 23:24:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:24:07] 
[2025-11-20 23:24:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:24:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:24:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:24:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:24:07] 
[2025-11-20 23:24:07] 2025-11-20 22:23:08,301 | INFO     | ***************************************
[2025-11-20 23:24:07] 2025-11-20 22:23:08,804 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-11-20 23:24:07] 2025-11-20 22:23:09,037 | INFO     | sufficient remaining disk space (495018049536 B)
[2025-11-20 23:24:07] 2025-11-20 22:23:09,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:24:07] 2025-11-20 22:23:09,037 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:24:07] 2025-11-20 22:23:09,037 | INFO     | update_server=False
[2025-11-20 23:24:07] 2025-11-20 22:23:09,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:24:07] 2025-11-20 22:23:09,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:24:07] 2025-11-20 22:23:09,110 | INFO     | all job control threads have been joined
[2025-11-20 23:24:07] 2025-11-20 22:23:09,180 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 23:24:07] 2025-11-20 22:23:09,181 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 23:24:07] 2025-11-20 22:23:09,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:24:07] 2025-11-20 22:23:09,181 | INFO     | will abort loop
[2025-11-20 23:24:07] 2025-11-20 22:23:09,877 | INFO     | all data control threads have been joined
[2025-11-20 23:24:07] 2025-11-20 22:23:10,044 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,089 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,097 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,116 | INFO     | [job] control thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,137 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,171 | INFO     | [job] validate thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,187 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,277 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:10,336 | INFO     | all payload control threads have been joined
[2025-11-20 23:24:07] 2025-11-20 22:23:10,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:24:07] 2025-11-20 22:23:10,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:24:07] 2025-11-20 22:23:10,884 | INFO     | [data] control thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:11,052 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:11,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:11,343 | INFO     | [payload] control thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:11,367 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:11,565 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:11,567 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:14,430 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:24:07] 2025-11-20 22:23:38,899 | INFO     | PID=11301 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 23:24:07] 2025-11-20 22:23:38,899 | INFO     | .. there are 9 such processes running
[2025-11-20 23:24:07] 2025-11-20 22:23:38,899 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:24:07] 2025-11-20 22:23:38,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:24:07] 2025-11-20 22:23:38,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:24:07] 2025-11-20 22:23:55,324 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:24:07] 2025-11-20 22:23:57,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647537305408)>', '<ExcThread(monitor, started 140646815885056)>']
[2025-11-20 23:24:07] 2025-11-20 22:23:58,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:24:07] 2025-11-20 22:23:58,015 | INFO     | [monitor] control thread has ended
[2025-11-20 23:24:07] 2025-11-20 22:24:02,300 | INFO     | all workflow threads have been joined
[2025-11-20 23:24:07] 2025-11-20 22:24:02,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:24:07] 2025-11-20 22:24:02,300 | INFO     | traces error code: 0
[2025-11-20 23:24:07] 2025-11-20 22:24:02,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:24:07] 2025-11-20 22:24:02,722 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:24:07] 2025-11-20 22:24:02,793 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:24:07] 2025-11-20 22:24:02,878 [wrapper] pilotpid: 11301
[2025-11-20 23:24:07] 2025-11-20 22:24:02,959 [wrapper] Pilot exit status: 0
[2025-11-20 23:24:07] 2025-11-20 22:24:03,257 [wrapper] pandaids: 6891579390
[2025-11-20 23:24:07] 2025-11-20 22:24:04,048 [wrapper] cleanup supervisor_pilot 11481 11302
[2025-11-20 23:24:07] 2025-11-20 22:24:04,153 [wrapper] Test setup, not cleaning
[2025-11-20 23:24:07] 2025-11-20 22:24:04,220 [wrapper] apfmon messages muted
[2025-11-20 23:24:07] 2025-11-20 22:24:04,332 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:24:07] 2025-11-20 22:24:04,431 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:24:07]  *** Error codes and diagnostics ***
[2025-11-20 23:24:07]     "exeErrorCode": 0,
[2025-11-20 23:24:07]     "exeErrorDiag": "",
[2025-11-20 23:24:07]     "pilotErrorCode": 0,
[2025-11-20 23:24:07]     "pilotErrorDiag": "",
[2025-11-20 23:24:07]  *** Listing of results directory ***
[2025-11-20 23:24:07] total 1337472
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:48 queuedata.json
[2025-11-20 23:24:07] -rwx------. 1 boinc boinc     36292 Nov 18 17:49 runpilot2-wrapper.sh
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc       100 Nov 19 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:24:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 21:21 run_atlas
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc       105 Nov 19 21:21 job.xml
[2025-11-20 23:24:07] -rw-r--r--. 2 boinc boinc 410545432 Nov 19 21:21 EVNT.47493065._000390.pool.root.1
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc      6390 Nov 19 21:21 init_data.xml
[2025-11-20 23:24:07] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:21 start_atlas.sh
[2025-11-20 23:24:07] drwxrwx--x. 2 boinc boinc        68 Nov 19 21:21 shared
[2025-11-20 23:24:07] -rw-r--r--. 2 boinc boinc    590092 Nov 19 21:21 input.tar.gz
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc         0 Nov 19 21:21 boinc_lockfile
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc      2773 Nov 19 21:21 pandaJob.out
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc    989443 Nov 19 21:25 agis_schedconf.cvmfs.json
[2025-11-20 23:24:07] drwx------. 5 boinc boinc      4096 Nov 19 21:25 pilot3
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc       533 Nov 20 22:46 boinc_task_state.xml
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc 925038798 Nov 20 23:19 HITS.47493068._003899.pool.root.1
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc      1031 Nov 20 23:21 memory_monitor_summary.json
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc   1526164 Nov 20 23:21 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc   2578068 Nov 20 23:21 log.47493068._003899.job.log.tgz.1
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc        95 Nov 20 23:22 pilot_heartbeat.json
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc      7965 Nov 20 23:23 heartbeat.json
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc      8192 Nov 20 23:23 boinc_mmap_file
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc        29 Nov 20 23:23 wrapper_checkpoint.txt
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc      5071 Nov 20 23:24 pilotlog.txt
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc  12461489 Nov 20 23:24 log.47493068._003899.job.log.1
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc       353 Nov 20 23:24 output.list
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc       620 Nov 20 23:24 runtime_log
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc  15063040 Nov 20 23:24 result.tar.gz
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc      8717 Nov 20 23:24 runtime_log.err
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc       662 Nov 20 23:24 JcFKDme4df8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiuFKDmLEvzLo.diag
[2025-11-20 23:24:07] -rw-r--r--. 1 boinc boinc     21498 Nov 20 23:24 stderr.txt
[2025-11-20 23:24:07] HITS file was successfully produced:
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc 925038798 Nov 20 23:19 shared/HITS.pool.root.1
[2025-11-20 23:24:07]  *** Contents of shared directory: ***
[2025-11-20 23:24:07] total 1319592
[2025-11-20 23:24:07] -rw-r--r--. 2 boinc boinc 410545432 Nov 19 21:21 ATLAS.root_0
[2025-11-20 23:24:07] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:21 start_atlas.sh
[2025-11-20 23:24:07] -rw-r--r--. 2 boinc boinc    590092 Nov 19 21:21 input.tar.gz
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc 925038798 Nov 20 23:19 HITS.pool.root.1
[2025-11-20 23:24:07] -rw-------. 1 boinc boinc  15063040 Nov 20 23:24 result.tar.gz
23:24:08 (7532): run_atlas exited; CPU time 341945.902890
23:24:08 (7532): called boinc_finish(0)

</stderr_txt>
]]>

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