Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:19:53 (31888): wrapper (7.7.26015): starting
19:19:53 (31888): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 19:19:53] Arguments: --nthreads 8
[2025-11-18 19:19:53] Threads: 8
[2025-11-18 19:19:53] Checking for CVMFS
[2025-11-18 19:19:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 19:19:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 19:19:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 19:19:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 19:19:58] 2.11.2.0 4277 274028 136688 153010 2 56 21499697 25165824 3291 130560 2 139161487 99.885 73670502 3000 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-18 19:19:58] CVMFS is ok
[2025-11-18 19:19:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 19:19:58] Checking for apptainer binary...
[2025-11-18 19:19:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 19:19:58] Running /usr/bin/apptainer --version
[2025-11-18 19:19:59] apptainer version 1.3.2-1.el7
[2025-11-18 19:19:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 19:20:06] cg-vwn279.simple-grid.lan
[2025-11-18 19:20:06] apptainer works
[2025-11-18 19:20:06] Set ATHENA_PROC_NUMBER=8
[2025-11-18 19:20:06] Set ATHENA_CORE_NUMBER=8
[2025-11-18 19:20:06] Starting ATLAS job with PandaID=6891579509
[2025-11-18 19:20:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 21:21:23]  *** The last 200 lines of the pilot log: ***
[2025-11-19 21:21:23] 2025-11-19 20:20:29,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 21:21:23] 2025-11-19 20:20:30,260 | INFO     | time since job start (93420s) is within the limit (172800.0s)
[2025-11-19 21:21:23] 2025-11-19 20:20:31,837 | INFO     | monitor loop #6248: job 0:6891579509 is in state 'finished'
[2025-11-19 21:21:23] 2025-11-19 20:20:31,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 21:21:23] 2025-11-19 20:20:32,272 | INFO     | time since job start (93422s) is within the limit (172800.0s)
[2025-11-19 21:21:23] 2025-11-19 20:20:34,278 | INFO     | time since job start (93424s) is within the limit (172800.0s)
[2025-11-19 21:21:23] 2025-11-19 20:20:34,342 | INFO     | monitor loop #6249: job 0:6891579509 is in state 'finished'
[2025-11-19 21:21:23] 2025-11-19 20:20:34,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 21:21:23] 2025-11-19 20:20:36,286 | INFO     | time since job start (93426s) is within the limit (172800.0s)
[2025-11-19 21:21:23] 2025-11-19 20:20:36,847 | INFO     | monitor loop #6250: job 0:6891579509 is in state 'finished'
[2025-11-19 21:21:23] 2025-11-19 20:20:36,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 21:21:23] 2025-11-19 20:20:38,294 | INFO     | time since job start (93428s) is within the limit (172800.0s)
[2025-11-19 21:21:23] 2025-11-19 20:20:39,359 | INFO     | monitor loop #6251: job 0:6891579509 is in state 'finished'
[2025-11-19 21:21:23] 2025-11-19 20:20:39,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 21:21:23] 2025-11-19 20:20:39,957 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-19 21:21:23] 2025-11-19 20:20:39,958 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-19 21:21:23] 2025-11-19 20:20:39,966 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6891579509/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 21:21:23] 2025-11-19 20:20:39,967 | INFO     | extracted standard info from prmon json
[2025-11-19 21:21:23] 2025-11-19 20:20:39,967 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 21:21:23] 2025-11-19 20:20:39,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 21:21:23] 2025-11-19 20:20:39,998 | INFO     | fitting pss+swap vs Time
[2025-11-19 21:21:23] 2025-11-19 20:20:40,000 | INFO     | sum of square deviations: 1097576517554.3035
[2025-11-19 21:21:23] 2025-11-19 20:20:40,067 | INFO     | sum of deviations: 5695073011120.414
[2025-11-19 21:21:23] 2025-11-19 20:20:40,067 | INFO     | mean x: 1763537154.6272967
[2025-11-19 21:21:23] 2025-11-19 20:20:40,067 | INFO     | mean y: 2853073.3845144357
[2025-11-19 21:21:23] 2025-11-19 20:20:40,068 | INFO     | intersect: -9147737061.14713
[2025-11-19 21:21:23] 2025-11-19 20:20:40,070 | INFO     | chi2: 21.759769325064827
[2025-11-19 21:21:23] 2025-11-19 20:20:40,072 | INFO     | sum of square deviations: 1086809565232.9309
[2025-11-19 21:21:23] 2025-11-19 20:20:40,144 | INFO     | sum of deviations: 6197995443888.383
[2025-11-19 21:21:23] 2025-11-19 20:20:40,144 | INFO     | mean x: 1763537002.1310072
[2025-11-19 21:21:23] 2025-11-19 20:20:40,145 | INFO     | mean y: 2860195.6714944043
[2025-11-19 21:21:23] 2025-11-19 20:20:40,145 | INFO     | intersect: -10054462314.17769
[2025-11-19 21:21:23] 2025-11-19 20:20:40,146 | INFO     | chi2: 18.737179619977628
[2025-11-19 21:21:23] 2025-11-19 20:20:40,147 | INFO     | current chi2=18.737179619977628 (change=13.890724942591708 %)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,147 | INFO     | right removable region: 1518
[2025-11-19 21:21:23] 2025-11-19 20:20:40,149 | INFO     | sum of square deviations: 1086808517252.9299
[2025-11-19 21:21:23] 2025-11-19 20:20:40,209 | INFO     | sum of deviations: 5041185749025.509
[2025-11-19 21:21:23] 2025-11-19 20:20:40,210 | INFO     | mean x: 1763537307.1310072
[2025-11-19 21:21:23] 2025-11-19 20:20:40,210 | INFO     | mean y: 2862333.9170506913
[2025-11-19 21:21:23] 2025-11-19 20:20:40,210 | INFO     | intersect: -8177345126.229893
[2025-11-19 21:21:23] 2025-11-19 20:20:40,212 | INFO     | chi2: 16.687406703905676
[2025-11-19 21:21:23] 2025-11-19 20:20:40,212 | INFO     | current chi2=16.687406703905676 (change=23.310737101042495 %)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,212 | INFO     | left removable region: 10
[2025-11-19 21:21:23] 2025-11-19 20:20:40,214 | INFO     | sum of square deviations: 1063368543473.7571
[2025-11-19 21:21:23] 2025-11-19 20:20:40,284 | INFO     | sum of deviations: 5064169640541.349
[2025-11-19 21:21:23] 2025-11-19 20:20:40,285 | INFO     | mean x: 1763537276.6392572
[2025-11-19 21:21:23] 2025-11-19 20:20:40,285 | INFO     | mean y: 2879819.8149867374
[2025-11-19 21:21:23] 2025-11-19 20:20:40,285 | INFO     | intersect: -8395762392.361662
[2025-11-19 21:21:23] 2025-11-19 20:20:40,287 | INFO     | chi2: 8.654387022926732
[2025-11-19 21:21:23] 2025-11-19 20:20:40,287 | INFO     | current memory leak: 4.76 B/s (using 1508 data points, chi2=8.65)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,289 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | ..............................
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . Timing measurements:
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . get job = 0 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . initial setup = 6 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . payload setup = 162 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . stage-in = 0 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . payload execution = 93068 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . stage-out = 3 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | . log creation = 1 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,290 | INFO     | ..............................
[2025-11-19 21:21:23] 2025-11-19 20:20:40,317 | INFO     | time since job start (93430s) is within the limit (172800.0s)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,414 | INFO     | 
[2025-11-19 21:21:23] 2025-11-19 20:20:40,414 | INFO     | job summary report
[2025-11-19 21:21:23] 2025-11-19 20:20:40,414 | INFO     | --------------------------------------------------
[2025-11-19 21:21:23] 2025-11-19 20:20:40,414 | INFO     | PanDA job id: 6891579509
[2025-11-19 21:21:23] 2025-11-19 20:20:40,414 | INFO     | task id: 47493068
[2025-11-19 21:21:23] 2025-11-19 20:20:40,414 | INFO     | errors: (none)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | pilot state: finished 
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | transexitcode: 0
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | exeerrorcode: 0
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | exeerrordiag: 
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | exitcode: 0
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | exitmsg: OK
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | cpuconsumptiontime: 345188 s
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | nevents: 1000
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | neventsw: 0
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | pid: 10193
[2025-11-19 21:21:23] 2025-11-19 20:20:40,415 | INFO     | pgrp: 10193
[2025-11-19 21:21:23] 2025-11-19 20:20:40,416 | INFO     | corecount: 8
[2025-11-19 21:21:23] 2025-11-19 20:20:40,416 | INFO     | event service: False
[2025-11-19 21:21:23] 2025-11-19 20:20:40,416 | INFO     | sizes: {0: 2296366, 1: 2297052, 2: 2297251, 13: 2297251, 24: 2297307, 34: 2297335, 45: 2297491, 56: 2297519, 67: 2297547, 77: 2297575, 88: 2297631, 89: 2298201, 99
[2025-11-19 21:21:23] 2025-11-19 20:20:40,416 | INFO     | --------------------------------------------------
[2025-11-19 21:21:23] 2025-11-19 20:20:40,416 | INFO     | 
[2025-11-19 21:21:23] 2025-11-19 20:20:40,416 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-11-19 21:21:23] 2025-11-19 20:20:40,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 21:21:23] 2025-11-19 20:20:40,513 | INFO     | job 6891579509 has completed (purged errors)
[2025-11-19 21:21:23] 2025-11-19 20:20:40,513 | INFO     | overall cleanup function is called
[2025-11-19 21:21:23] 2025-11-19 20:20:41,466 | INFO     | PID=3627 has CPU usage=17.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-19 21:21:23] 2025-11-19 20:20:41,466 | INFO     | .. there are 9 such processes running
[2025-11-19 21:21:23] 2025-11-19 20:20:41,533 | INFO     | --- collectZombieJob: --- 10, [10193]
[2025-11-19 21:21:23] 2025-11-19 20:20:41,534 | INFO     | zombie collector waiting for pid 10193
[2025-11-19 21:21:23] 2025-11-19 20:20:41,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 21:21:23] 2025-11-19 20:20:41,534 | INFO     | collected zombie processes
[2025-11-19 21:21:23] 2025-11-19 20:20:41,534 | INFO     | will attempt to kill all subprocesses of pid=10193
[2025-11-19 21:21:23] 2025-11-19 20:20:41,634 | INFO     | process IDs to be killed: [10193] (in reverse order)
[2025-11-19 21:21:23] 2025-11-19 20:20:41,709 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 21:21:23] 2025-11-19 20:20:41,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 21:21:23] 2025-11-19 20:20:41,713 | INFO     | did not find any defunct processes belonging to 10193
[2025-11-19 21:21:23] 2025-11-19 20:20:41,717 | INFO     | did not find any defunct processes belonging to 10193
[2025-11-19 21:21:23] 2025-11-19 20:20:41,719 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 21:21:23] 2025-11-19 20:20:41,720 | INFO     | ready for new job
[2025-11-19 21:21:23] 2025-11-19 20:20:41,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 21:21:23] 2025-11-19 20:20:41,727 | INFO     | ***************************************
[2025-11-19 21:21:23] 2025-11-19 20:20:41,727 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 21:21:23] 2025-11-19 20:20:41,727 | INFO     | ***************************************
[2025-11-19 21:21:23] 2025-11-19 20:20:41,727 | INFO     | 
[2025-11-19 21:21:23] 2025-11-19 20:20:41,728 | INFO     | pilot is running in a VM
[2025-11-19 21:21:23] 2025-11-19 20:20:41,728 | INFO     | architecture information:
[2025-11-19 21:21:23] 2025-11-19 20:20:41,729 | INFO     | executing command: cat /etc/os-release
[2025-11-19 21:21:23] 2025-11-19 20:20:41,757 | INFO     | cat /etc/os-release:
[2025-11-19 21:21:23] NAME="CentOS Linux"
[2025-11-19 21:21:23] VERSION="7 (Core)"
[2025-11-19 21:21:23] ID="centos"
[2025-11-19 21:21:23] ID_LIKE="rhel fedora"
[2025-11-19 21:21:23] VERSION_ID="7"
[2025-11-19 21:21:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 21:21:23] ANSI_COLOR="0;31"
[2025-11-19 21:21:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 21:21:23] HOME_URL="https://www.centos.org/"
[2025-11-19 21:21:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 21:21:23] 
[2025-11-19 21:21:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 21:21:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 21:21:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 21:21:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 21:21:23] 
[2025-11-19 21:21:23] 2025-11-19 20:20:41,758 | INFO     | ***************************************
[2025-11-19 21:21:23] 2025-11-19 20:20:42,261 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-11-19 21:21:23] 2025-11-19 20:20:42,290 | INFO     | sufficient remaining disk space (495284387840 B)
[2025-11-19 21:21:23] 2025-11-19 20:20:42,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 21:21:23] 2025-11-19 20:20:42,290 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 21:21:23] 2025-11-19 20:20:42,291 | INFO     | update_server=False
[2025-11-19 21:21:23] 2025-11-19 20:20:42,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 21:21:23] 2025-11-19 20:20:42,291 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-19 21:21:23] 2025-11-19 20:20:42,292 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 21:21:23] 2025-11-19 20:20:42,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 21:21:23] 2025-11-19 20:20:42,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 21:21:23] 2025-11-19 20:20:42,293 | INFO     | all job control threads have been joined
[2025-11-19 21:21:23] 2025-11-19 20:20:42,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 21:21:23] 2025-11-19 20:20:42,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 21:21:23] 2025-11-19 20:20:42,363 | INFO     | all payload control threads have been joined
[2025-11-19 21:21:23] 2025-11-19 20:20:42,544 | INFO     | all data control threads have been joined
[2025-11-19 21:21:23] 2025-11-19 20:20:42,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 21:21:23] 2025-11-19 20:20:42,888 | INFO     | aborting loop
[2025-11-19 21:21:23] 2025-11-19 20:20:43,298 | INFO     | [job] control thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:43,299 | INFO     | [job] queue monitor thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:43,299 | INFO     | [job] retrieve thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:43,369 | INFO     | [payload] control thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:43,550 | INFO     | [data] control thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:43,747 | INFO     | [job] validate thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:43,894 | INFO     | [job] job monitor thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:43,961 | INFO     | [payload] validate_post thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:44,041 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:44,066 | INFO     | [data] copytool_in thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:44,067 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:44,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 21:21:23] 2025-11-19 20:20:44,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:44,216 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:44,301 | INFO     | [data] copytool_out thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:44,764 | INFO     | [payload] failed_post thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:20:48,107 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 21:21:23] 2025-11-19 20:21:12,888 | INFO     | [monitor] cgroup control has ended
[2025-11-19 21:21:23] 2025-11-19 20:21:14,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248864114496)>', '<ExcThread(monitor, started 140248424097536)>']
[2025-11-19 21:21:23] 2025-11-19 20:21:14,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 21:21:23] 2025-11-19 20:21:14,481 | INFO     | [monitor] control thread has ended
[2025-11-19 21:21:23] 2025-11-19 20:21:19,293 | INFO     | all workflow threads have been joined
[2025-11-19 21:21:23] 2025-11-19 20:21:19,293 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 21:21:23] 2025-11-19 20:21:19,294 | INFO     | traces error code: 0
[2025-11-19 21:21:23] 2025-11-19 20:21:19,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 21:21:23] 2025-11-19 20:21:19,640 [wrapper] ==== pilot stdout END ====
[2025-11-19 21:21:23] 2025-11-19 20:21:19,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 21:21:23] 2025-11-19 20:21:19,796 [wrapper] pilotpid: 3627
[2025-11-19 21:21:23] 2025-11-19 20:21:19,905 [wrapper] Pilot exit status: 0
[2025-11-19 21:21:23] 2025-11-19 20:21:20,286 [wrapper] pandaids: 6891579509
[2025-11-19 21:21:23] 2025-11-19 20:21:21,063 [wrapper] cleanup supervisor_pilot 21964 3628
[2025-11-19 21:21:23] 2025-11-19 20:21:21,148 [wrapper] Test setup, not cleaning
[2025-11-19 21:21:23] 2025-11-19 20:21:21,227 [wrapper] apfmon messages muted
[2025-11-19 21:21:23] 2025-11-19 20:21:21,276 [wrapper] ==== wrapper stdout END ====
[2025-11-19 21:21:23] 2025-11-19 20:21:21,308 [wrapper] ==== wrapper stderr END ====
[2025-11-19 21:21:23]  *** Error codes and diagnostics ***
[2025-11-19 21:21:23]     "exeErrorCode": 0,
[2025-11-19 21:21:23]     "exeErrorDiag": "",
[2025-11-19 21:21:23]     "pilotErrorCode": 0,
[2025-11-19 21:21:23]     "pilotErrorDiag": "",
[2025-11-19 21:21:23]  *** Listing of results directory ***
[2025-11-19 21:21:23] total 1333264
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-19 21:21:23] -rwx------. 1 boinc boinc     36292 Nov 18 17:49 runpilot2-wrapper.sh
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:49 queuedata.json
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc       100 Nov 18 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 21:21:23] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 19:19 run_atlas
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc       105 Nov 18 19:19 job.xml
[2025-11-19 21:21:23] -rw-r--r--. 2 boinc boinc 409377509 Nov 18 19:19 EVNT.47493065._000399.pool.root.1
[2025-11-19 21:21:23] -rw-r--r--. 2 boinc boinc     15120 Nov 18 19:19 start_atlas.sh
[2025-11-19 21:21:23] drwxrwx--x. 2 boinc boinc        68 Nov 18 19:19 shared
[2025-11-19 21:21:23] -rw-r--r--. 2 boinc boinc    590089 Nov 18 19:19 input.tar.gz
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc      6390 Nov 18 19:19 init_data.xml
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc         0 Nov 18 19:19 boinc_lockfile
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc      2770 Nov 18 19:20 pandaJob.out
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc    992798 Nov 18 19:23 agis_schedconf.cvmfs.json
[2025-11-19 21:21:23] drwx------. 5 boinc boinc      4096 Nov 18 19:23 pilot3
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc       533 Nov 19 21:03 boinc_task_state.xml
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc 921862352 Nov 19 21:19 HITS.47493068._003981.pool.root.1
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc      1033 Nov 19 21:20 memory_monitor_summary.json
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc   1525063 Nov 19 21:20 agis_ddmendpoints.agis.ALL.json
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc   2584692 Nov 19 21:20 log.47493068._003981.job.log.tgz.1
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc        95 Nov 19 21:20 pilot_heartbeat.json
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc      8628 Nov 19 21:20 heartbeat.json
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc      4616 Nov 19 21:21 pilotlog.txt
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc        29 Nov 19 21:21 wrapper_checkpoint.txt
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc  12465419 Nov 19 21:21 log.47493068._003981.job.log.1
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc      8192 Nov 19 21:21 boinc_mmap_file
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc       353 Nov 19 21:21 output.list
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc       620 Nov 19 21:21 runtime_log
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc  15073280 Nov 19 21:21 result.tar.gz
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc       662 Nov 19 21:21 XsvKDm44df8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8TFKDmdLgmtn.diag
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc      8717 Nov 19 21:21 runtime_log.err
[2025-11-19 21:21:23] -rw-r--r--. 1 boinc boinc     21473 Nov 19 21:21 stderr.txt
[2025-11-19 21:21:23] HITS file was successfully produced:
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc 921862352 Nov 19 21:19 shared/HITS.pool.root.1
[2025-11-19 21:21:23]  *** Contents of shared directory: ***
[2025-11-19 21:21:23] total 1315360
[2025-11-19 21:21:23] -rw-r--r--. 2 boinc boinc 409377509 Nov 18 19:19 ATLAS.root_0
[2025-11-19 21:21:23] -rw-r--r--. 2 boinc boinc     15120 Nov 18 19:19 start_atlas.sh
[2025-11-19 21:21:23] -rw-r--r--. 2 boinc boinc    590089 Nov 18 19:19 input.tar.gz
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc 921862352 Nov 19 21:19 HITS.pool.root.1
[2025-11-19 21:21:23] -rw-------. 1 boinc boinc  15073280 Nov 19 21:21 result.tar.gz
21:21:25 (31888): run_atlas exited; CPU time 345895.602926
21:21:25 (31888): called boinc_finish(0)

</stderr_txt>
]]>

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