Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:03:23 (4770): wrapper (7.7.26015): starting
22:03:23 (4770): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 22:03:23] Arguments: --nthreads 8
[2025-11-20 22:03:23] Threads: 8
[2025-11-20 22:03:23] Checking for CVMFS
[2025-11-20 22:03:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:03:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:03:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:03:25] 2.11.2.0 30898 277071 138300 153088 0 212 20538132 25165824 4158 130560 4 125427670 99.876 74948560 3198 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 22:03:25] CVMFS is ok
[2025-11-20 22:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:03:25] Checking for apptainer binary...
[2025-11-20 22:03:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:03:25] Running /usr/bin/apptainer --version
[2025-11-20 22:03:25] apptainer version 1.3.2-1.el7
[2025-11-20 22:03:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:03:26] cg-vwn285.simple-grid.lan
[2025-11-20 22:03:26] apptainer works
[2025-11-20 22:03:26] Set ATHENA_PROC_NUMBER=8
[2025-11-20 22:03:26] Set ATHENA_CORE_NUMBER=8
[2025-11-20 22:03:26] Starting ATLAS job with PandaID=6891577913
[2025-11-20 22:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:25:05]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:25:05] 2025-11-21 23:23:42,955 | INFO     | time since job start (94774s) is within the limit (172800.0s)
[2025-11-22 00:25:05] 2025-11-21 23:23:44,970 | INFO     | time since job start (94776s) is within the limit (172800.0s)
[2025-11-22 00:25:05] 2025-11-21 23:23:45,183 | INFO     | monitor loop #6393: job 0:6891577913 is in state 'finished'
[2025-11-22 00:25:05] 2025-11-21 23:23:45,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:25:05] 2025-11-21 23:23:46,979 | INFO     | time since job start (94778s) is within the limit (172800.0s)
[2025-11-22 00:25:05] 2025-11-21 23:23:47,689 | INFO     | monitor loop #6394: job 0:6891577913 is in state 'finished'
[2025-11-22 00:25:05] 2025-11-21 23:23:47,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:25:05] 2025-11-21 23:23:48,987 | INFO     | time since job start (94780s) is within the limit (172800.0s)
[2025-11-22 00:25:05] 2025-11-21 23:23:50,198 | INFO     | monitor loop #6395: job 0:6891577913 is in state 'finished'
[2025-11-22 00:25:05] 2025-11-21 23:23:50,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:25:05] 2025-11-21 23:23:50,999 | INFO     | time since job start (94782s) is within the limit (172800.0s)
[2025-11-22 00:25:05] 2025-11-21 23:23:52,703 | INFO     | monitor loop #6396: job 0:6891577913 is in state 'finished'
[2025-11-22 00:25:05] 2025-11-21 23:23:52,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:25:05] 2025-11-21 23:23:53,006 | INFO     | time since job start (94785s) is within the limit (172800.0s)
[2025-11-22 00:25:05] 2025-11-21 23:23:53,085 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 00:25:05] 2025-11-21 23:23:53,086 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 00:25:05] 2025-11-21 23:23:53,088 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6891577913/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 00:25:05] 2025-11-21 23:23:53,089 | INFO     | extracted standard info from prmon json
[2025-11-22 00:25:05] 2025-11-21 23:23:53,089 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:25:05] 2025-11-21 23:23:53,089 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:25:05] 2025-11-21 23:23:53,137 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:25:05] 2025-11-21 23:23:53,139 | INFO     | sum of square deviations: 1143572130722.4075
[2025-11-22 00:25:05] 2025-11-21 23:23:53,251 | INFO     | sum of deviations: 4874925741001.954
[2025-11-22 00:25:05] 2025-11-21 23:23:53,252 | INFO     | mean x: 1763720184.3203883
[2025-11-22 00:25:05] 2025-11-21 23:23:53,252 | INFO     | mean y: 2862540.680906149
[2025-11-22 00:25:05] 2025-11-21 23:23:53,252 | INFO     | intersect: -7515688056.592494
[2025-11-22 00:25:05] 2025-11-21 23:23:53,254 | INFO     | chi2: 20.106246249123096
[2025-11-22 00:25:05] 2025-11-21 23:23:53,256 | INFO     | sum of square deviations: 1132505996578.6638
[2025-11-22 00:25:05] 2025-11-21 23:23:53,324 | INFO     | sum of deviations: 5369092039530.253
[2025-11-22 00:25:05] 2025-11-21 23:23:53,325 | INFO     | mean x: 1763720031.8246753
[2025-11-22 00:25:05] 2025-11-21 23:23:53,325 | INFO     | mean y: 2869351.2824675324
[2025-11-22 00:25:05] 2025-11-21 23:23:53,325 | INFO     | intersect: -8358742164.628081
[2025-11-22 00:25:05] 2025-11-21 23:23:53,327 | INFO     | chi2: 17.251546712823846
[2025-11-22 00:25:05] 2025-11-21 23:23:53,327 | INFO     | current chi2=17.251546712823846 (change=14.19807308101458 %)
[2025-11-22 00:25:05] 2025-11-21 23:23:53,327 | INFO     | right removable region: 1539
[2025-11-22 00:25:05] 2025-11-21 23:23:53,330 | INFO     | sum of square deviations: 1132504752178.6604
[2025-11-22 00:25:05] 2025-11-21 23:23:53,439 | INFO     | sum of deviations: 4208891100457.6797
[2025-11-22 00:25:05] 2025-11-21 23:23:53,439 | INFO     | mean x: 1763720336.8246753
[2025-11-22 00:25:05] 2025-11-21 23:23:53,439 | INFO     | mean y: 2871718.1506493506
[2025-11-22 00:25:05] 2025-11-21 23:23:53,439 | INFO     | intersect: -6551897094.145266
[2025-11-22 00:25:05] 2025-11-21 23:23:53,441 | INFO     | chi2: 15.103497250193996
[2025-11-22 00:25:05] 2025-11-21 23:23:53,442 | INFO     | current chi2=15.103497250193996 (change=24.881566339849673 %)
[2025-11-22 00:25:05] 2025-11-21 23:23:53,442 | INFO     | left removable region: 10
[2025-11-22 00:25:05] 2025-11-21 23:23:53,444 | INFO     | sum of square deviations: 1108409820174.222
[2025-11-22 00:25:05] 2025-11-21 23:23:53,510 | INFO     | sum of deviations: 4222952197523.5654
[2025-11-22 00:25:05] 2025-11-21 23:23:53,511 | INFO     | mean x: 1763720306.3342054
[2025-11-22 00:25:05] 2025-11-21 23:23:53,511 | INFO     | mean y: 2888858.822759974
[2025-11-22 00:25:05] 2025-11-21 23:23:53,511 | INFO     | intersect: -6716743544.181628
[2025-11-22 00:25:05] 2025-11-21 23:23:53,513 | INFO     | chi2: 7.224478920357434
[2025-11-22 00:25:05] 2025-11-21 23:23:53,513 | INFO     | current memory leak: 3.81 B/s (using 1529 data points, chi2=7.22)
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | ..............................
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | . Timing measurements:
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | . get job = 0 s
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | . initial setup = 3 s
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | . payload setup = 155 s
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | . stage-in = 0 s
[2025-11-22 00:25:05] 2025-11-21 23:23:53,516 | INFO     | . payload execution = 94388 s
[2025-11-22 00:25:05] 2025-11-21 23:23:53,517 | INFO     | . stage-out = 6 s
[2025-11-22 00:25:05] 2025-11-21 23:23:53,517 | INFO     | . log creation = 1 s
[2025-11-22 00:25:05] 2025-11-21 23:23:53,517 | INFO     | ..............................
[2025-11-22 00:25:05] 2025-11-21 23:23:54,079 | INFO     | 
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | job summary report
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | --------------------------------------------------
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | PanDA job id: 6891577913
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | task id: 47493068
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | errors: (none)
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | pilot state: finished 
[2025-11-22 00:25:05] 2025-11-21 23:23:54,080 | INFO     | transexitcode: 0
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | exeerrorcode: 0
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | exeerrordiag: 
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | exitcode: 0
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | exitmsg: OK
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | cpuconsumptiontime: 345161 s
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | nevents: 1000
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | neventsw: 0
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | pid: 17493
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | pgrp: 17493
[2025-11-22 00:25:05] 2025-11-21 23:23:54,081 | INFO     | corecount: 8
[2025-11-22 00:25:05] 2025-11-21 23:23:54,082 | INFO     | event service: False
[2025-11-22 00:25:05] 2025-11-21 23:23:54,082 | INFO     | sizes: {0: 2298626, 1: 2298825, 12: 2298825, 23: 2298853, 34: 2298881, 38: 2299171, 44: 2299327, 94548: 2364465, 94555: 2373461, 94558: 2373517, 94644: 2373763}
[2025-11-22 00:25:05] 2025-11-21 23:23:54,082 | INFO     | --------------------------------------------------
[2025-11-22 00:25:05] 2025-11-21 23:23:54,082 | INFO     | 
[2025-11-22 00:25:05] 2025-11-21 23:23:54,082 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-22 00:25:05] 2025-11-21 23:23:54,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | job 6891577913 has completed (purged errors)
[2025-11-22 00:25:05] 2025-11-21 23:23:54,446 | INFO     | overall cleanup function is called
[2025-11-22 00:25:05] 2025-11-21 23:23:55,465 | INFO     | --- collectZombieJob: --- 10, [17493]
[2025-11-22 00:25:05] 2025-11-21 23:23:55,466 | INFO     | zombie collector waiting for pid 17493
[2025-11-22 00:25:05] 2025-11-21 23:23:55,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:25:05] 2025-11-21 23:23:55,466 | INFO     | collected zombie processes
[2025-11-22 00:25:05] 2025-11-21 23:23:55,466 | INFO     | will attempt to kill all subprocesses of pid=17493
[2025-11-22 00:25:05] 2025-11-21 23:23:55,591 | INFO     | process IDs to be killed: [17493] (in reverse order)
[2025-11-22 00:25:05] 2025-11-21 23:23:56,361 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:25:05] 2025-11-21 23:23:56,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:25:05] 2025-11-21 23:23:56,366 | INFO     | did not find any defunct processes belonging to 17493
[2025-11-22 00:25:05] 2025-11-21 23:23:56,369 | INFO     | did not find any defunct processes belonging to 17493
[2025-11-22 00:25:05] 2025-11-21 23:23:56,444 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:25:05] 2025-11-21 23:23:56,445 | INFO     | ready for new job
[2025-11-22 00:25:05] 2025-11-21 23:23:56,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:25:05] 2025-11-21 23:23:56,457 | INFO     | ***************************************
[2025-11-22 00:25:05] 2025-11-21 23:23:56,457 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:25:05] 2025-11-21 23:23:56,457 | INFO     | ***************************************
[2025-11-22 00:25:05] 2025-11-21 23:23:56,457 | INFO     | 
[2025-11-22 00:25:05] 2025-11-21 23:23:56,458 | INFO     | pilot is running in a VM
[2025-11-22 00:25:05] 2025-11-21 23:23:56,458 | INFO     | architecture information:
[2025-11-22 00:25:05] 2025-11-21 23:23:56,468 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:25:05] 2025-11-21 23:23:56,649 | INFO     | cat /etc/os-release:
[2025-11-22 00:25:05] NAME="CentOS Linux"
[2025-11-22 00:25:05] VERSION="7 (Core)"
[2025-11-22 00:25:05] ID="centos"
[2025-11-22 00:25:05] ID_LIKE="rhel fedora"
[2025-11-22 00:25:05] VERSION_ID="7"
[2025-11-22 00:25:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:25:05] ANSI_COLOR="0;31"
[2025-11-22 00:25:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:25:05] HOME_URL="https://www.centos.org/"
[2025-11-22 00:25:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:25:05] 
[2025-11-22 00:25:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:25:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:25:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:25:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:25:05] 
[2025-11-22 00:25:05] 2025-11-21 23:23:56,650 | INFO     | ***************************************
[2025-11-22 00:25:05] 2025-11-21 23:23:57,153 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-22 00:25:05] 2025-11-21 23:23:57,364 | INFO     | sufficient remaining disk space (493645463552 B)
[2025-11-22 00:25:05] 2025-11-21 23:23:57,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:25:05] 2025-11-21 23:23:57,366 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:25:05] 2025-11-21 23:23:57,366 | INFO     | update_server=False
[2025-11-22 00:25:05] 2025-11-21 23:23:57,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:25:05] 2025-11-21 23:23:57,383 | INFO     | all payload control threads have been joined
[2025-11-22 00:25:05] 2025-11-21 23:23:57,719 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 00:25:05] 2025-11-21 23:23:57,720 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 00:25:05] 2025-11-21 23:23:57,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:25:05] 2025-11-21 23:23:57,720 | INFO     | will abort loop
[2025-11-22 00:25:05] 2025-11-21 23:23:57,903 | INFO     | all data control threads have been joined
[2025-11-22 00:25:05] 2025-11-21 23:23:58,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:25:05] 2025-11-21 23:23:58,371 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:58,389 | INFO     | [payload] control thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:58,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:58,525 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:58,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:25:05] 2025-11-21 23:23:58,725 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:58,730 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:58,909 | INFO     | [data] control thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:59,072 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:59,075 | INFO     | all job control threads have been joined
[2025-11-22 00:25:05] 2025-11-21 23:23:59,126 | INFO     | [job] validate thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:59,172 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:59,316 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:59,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:25:05] 2025-11-21 23:23:59,677 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:23:59,679 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:24:00,081 | INFO     | [job] control thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:24:00,217 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:24:03,349 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:25:05] 2025-11-21 23:24:26,168 | INFO     | PID=10950 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 00:25:05] 2025-11-21 23:24:26,168 | INFO     | .. there are 9 such processes running
[2025-11-22 00:25:05] 2025-11-21 23:24:26,169 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:25:05] 2025-11-21 23:24:26,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:25:05] 2025-11-21 23:24:26,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:25:05] 2025-11-21 23:24:53,335 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:25:05] 2025-11-21 23:24:55,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140443969861440)>', '<ExcThread(monitor, started 140442930763520)>']
[2025-11-22 00:25:05] 2025-11-21 23:24:55,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:25:05] 2025-11-21 23:24:55,375 | INFO     | [monitor] control thread has ended
[2025-11-22 00:25:05] 2025-11-21 23:25:00,048 | INFO     | all workflow threads have been joined
[2025-11-22 00:25:05] 2025-11-21 23:25:00,049 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:25:05] 2025-11-21 23:25:00,049 | INFO     | traces error code: 0
[2025-11-22 00:25:05] 2025-11-21 23:25:00,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:25:05] 2025-11-21 23:25:00,622 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:25:05] 2025-11-21 23:25:00,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:25:05] 2025-11-21 23:25:00,822 [wrapper] pilotpid: 10950
[2025-11-22 00:25:05] 2025-11-21 23:25:00,904 [wrapper] Pilot exit status: 0
[2025-11-22 00:25:05] 2025-11-21 23:25:01,284 [wrapper] pandaids: 6891577913
[2025-11-22 00:25:05] 2025-11-21 23:25:02,273 [wrapper] cleanup supervisor_pilot 27824 10951
[2025-11-22 00:25:05] 2025-11-21 23:25:02,374 [wrapper] Test setup, not cleaning
[2025-11-22 00:25:05] 2025-11-21 23:25:02,477 [wrapper] apfmon messages muted
[2025-11-22 00:25:05] 2025-11-21 23:25:02,595 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:25:05] 2025-11-21 23:25:02,718 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:25:05]  *** Error codes and diagnostics ***
[2025-11-22 00:25:05]     "exeErrorCode": 0,
[2025-11-22 00:25:05]     "exeErrorDiag": "",
[2025-11-22 00:25:05]     "pilotErrorCode": 0,
[2025-11-22 00:25:05]     "pilotErrorDiag": "",
[2025-11-22 00:25:05]  *** Listing of results directory ***
[2025-11-22 00:25:05] total 1344908
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:48 queuedata.json
[2025-11-22 00:25:05] -rwx------. 1 boinc boinc     36292 Nov 18 17:49 runpilot2-wrapper.sh
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc       100 Nov 20 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:25:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 22:03 run_atlas
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc       105 Nov 20 22:03 job.xml
[2025-11-22 00:25:05] -rw-r--r--. 2 boinc boinc 410438270 Nov 20 22:03 EVNT.47493065._000387.pool.root.1
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc      6390 Nov 20 22:03 init_data.xml
[2025-11-22 00:25:05] -rw-r--r--. 2 boinc boinc     15120 Nov 20 22:03 start_atlas.sh
[2025-11-22 00:25:05] drwxrwx--x. 2 boinc boinc        68 Nov 20 22:03 shared
[2025-11-22 00:25:05] -rw-r--r--. 2 boinc boinc    590098 Nov 20 22:03 input.tar.gz
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc         0 Nov 20 22:03 boinc_lockfile
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc      2773 Nov 20 22:03 pandaJob.out
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc    989440 Nov 20 22:04 agis_schedconf.cvmfs.json
[2025-11-22 00:25:05] drwx------. 5 boinc boinc      4096 Nov 20 22:04 pilot3
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc       533 Nov 22 00:03 boinc_task_state.xml
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc 932275454 Nov 22 00:21 HITS.47493068._003867.pool.root.1
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc      1032 Nov 22 00:22 memory_monitor_summary.json
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc   1526164 Nov 22 00:22 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc   2609904 Nov 22 00:22 log.47493068._003867.job.log.tgz.1
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc      8628 Nov 22 00:23 heartbeat.json
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc        95 Nov 22 00:24 pilot_heartbeat.json
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc        29 Nov 22 00:24 wrapper_checkpoint.txt
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc      8192 Nov 22 00:24 boinc_mmap_file
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc      5071 Nov 22 00:25 pilotlog.txt
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc  12670516 Nov 22 00:25 log.47493068._003867.job.log.1
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc       353 Nov 22 00:25 output.list
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc       620 Nov 22 00:25 runtime_log
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc  15298560 Nov 22 00:25 result.tar.gz
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc      8717 Nov 22 00:25 runtime_log.err
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc       662 Nov 22 00:25 3WwLDmd4df8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFuFKDmz5r4Qm.diag
[2025-11-22 00:25:05] -rw-r--r--. 1 boinc boinc     21417 Nov 22 00:25 stderr.txt
[2025-11-22 00:25:05] HITS file was successfully produced:
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc 932275454 Nov 22 00:21 shared/HITS.pool.root.1
[2025-11-22 00:25:05]  *** Contents of shared directory: ***
[2025-11-22 00:25:05] total 1326784
[2025-11-22 00:25:05] -rw-r--r--. 2 boinc boinc 410438270 Nov 20 22:03 ATLAS.root_0
[2025-11-22 00:25:05] -rw-r--r--. 2 boinc boinc     15120 Nov 20 22:03 start_atlas.sh
[2025-11-22 00:25:05] -rw-r--r--. 2 boinc boinc    590098 Nov 20 22:03 input.tar.gz
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc 932275454 Nov 22 00:21 HITS.pool.root.1
[2025-11-22 00:25:05] -rw-------. 1 boinc boinc  15298560 Nov 22 00:25 result.tar.gz
00:25:07 (4770): run_atlas exited; CPU time 345760.684587
00:25:07 (4770): called boinc_finish(0)

</stderr_txt>
]]>

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